Protein–RNA interactions for Protein: Q5VVS0

C1orf140, Putative uncharacterized protein C1orf140, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf140Q5VVS0 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C1orf140Q5VVS0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C1orf140Q5VVS0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C1orf140Q5VVS0 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.29■□□□□ 0.04
C1orf140Q5VVS0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C1orf140Q5VVS0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
C1orf140Q5VVS0 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.29■□□□□ 0.04
C1orf140Q5VVS0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
C1orf140Q5VVS0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.29■□□□□ 0.04
C1orf140Q5VVS0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
C1orf140Q5VVS0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 LINC00895-201ENST00000629028 1637 ntBASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 AC008667.4-201ENST00000607370 168 ntBASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 AC005593.1-201ENST00000624894 515 ntBASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
C1orf140Q5VVS0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 AC124067.4-201ENST00000519691 2379 ntBASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 AL031284.1-201ENST00000419297 478 ntBASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 SLC25A6P2-201ENST00000497974 877 ntBASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.27■□□□□ 0.04
C1orf140Q5VVS0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
C1orf140Q5VVS0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.27■□□□□ 0.03
C1orf140Q5VVS0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
C1orf140Q5VVS0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1orf140Q5VVS0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.27■□□□□ 0.03
C1orf140Q5VVS0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.27■□□□□ 0.03
C1orf140Q5VVS0 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1orf140Q5VVS0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
C1orf140Q5VVS0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1orf140Q5VVS0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
C1orf140Q5VVS0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C1orf140Q5VVS0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.27■□□□□ 0.03
C1orf140Q5VVS0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
C1orf140Q5VVS0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1orf140Q5VVS0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C1orf140Q5VVS0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1orf140Q5VVS0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C1orf140Q5VVS0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.26■□□□□ 0.03
C1orf140Q5VVS0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
C1orf140Q5VVS0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms