RNA–Protein interactions for RNA: ENST00000402420.1

CENPM-204, Transcript of centromere protein M, humanhuman

TSL 5 BASIC

Gene CENPM, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPM-204ENST00000402420 NISCHQ9Y2I1 1504 aa42.41■■■■■ 4.38
CENPM-204ENST00000402420 CCDC180Q9P1Z9 1646 aa37.67■■■■□ 3.62
CENPM-204ENST00000402420 ABCC9O60706 1549 aa37.33■■■■□ 3.57
CENPM-204ENST00000402420 DCAF8L2P0C7V8 631 aa35.7■■■■□ 3.31
CENPM-204ENST00000402420 RB1CC1Q8TDY2 1594 aa35.63■■■■□ 3.29
CENPM-204ENST00000402420 NACADO15069 1562 aa35.51■■■■□ 3.28
CENPM-204ENST00000402420 ZCCHC6Q5VYS8 1495 aaKnown RBP35.26■■■■□ 3.23
CENPM-204ENST00000402420 MYO15BQ96JP2 1530 aa35.16■■■■□ 3.22
CENPM-204ENST00000402420 DCAF1Q9Y4B6 1507 aa34.96■■■■□ 3.19
CENPM-204ENST00000402420 PABPN1Q86U42 306 aaKnown RBP eCLIP34.92■■■■□ 3.18
CENPM-204ENST00000402420 UNC13AQ9UPW8 1703 aa34.84■■■■□ 3.17
CENPM-204ENST00000402420 BICRAQ9NZM4 1560 aa34.66■■■■□ 3.14
CENPM-204ENST00000402420 DNAJC5BQ9UF47 199 aa34.6■■■■□ 3.13
CENPM-204ENST00000402420 SCRIBQ14160 1630 aa34.54■■■■□ 3.12
CENPM-204ENST00000402420 SHROOM4Q9ULL8 1493 aa34.05■■■■□ 3.04
CENPM-204ENST00000402420 EIF4G1Q04637 1599 aaKnown RBP33.73■■■□□ 2.99
CENPM-204ENST00000402420 CC2D2AQ9P2K1 1620 aa33.68■■■□□ 2.98
CENPM-204ENST00000402420 CECR2Q9BXF3 1484 aa33.5■■■□□ 2.95
CENPM-204ENST00000402420 SMARCA4P51532 1647 aa32.94■■■□□ 2.86
CENPM-204ENST00000402420 ATAD2BQ9ULI0 1458 aa32.86■■■□□ 2.85
CENPM-204ENST00000402420 NCAPD3P42695 1498 aa32.83■■■□□ 2.85
CENPM-204ENST00000402420 BAZ1AQ9NRL2 1556 aaPredicted RBP32.82■■■□□ 2.84
CENPM-204ENST00000402420 MROH2BQ7Z745 1585 aa32.75■■■□□ 2.83
CENPM-204ENST00000402420 SMARCA2P51531 1590 aa32.7■■■□□ 2.83
CENPM-204ENST00000402420 HMGXB3Q12766 1538 aa32.59■■■□□ 2.81
CENPM-204ENST00000402420 PEG3Q9GZU2 1588 aa32.55■■■□□ 2.8
CENPM-204ENST00000402420 BAZ1BQ9UIG0 1483 aaKnown RBP32.54■■■□□ 2.8
CENPM-204ENST00000402420 WIZO95785 1651 aa32.37■■■□□ 2.77
CENPM-204ENST00000402420 RSF1Q96T23 1441 aaPredicted RBP32.27■■■□□ 2.76
CENPM-204ENST00000402420 NESP48681 1621 aa32.26■■■□□ 2.76
CENPM-204ENST00000402420 ERCC6Q03468 1493 aa32.1■■■□□ 2.73
CENPM-204ENST00000402420 LAMC3Q9Y6N6 1575 aa31.94■■■□□ 2.7
CENPM-204ENST00000402420 TOP2AP11388 1531 aaKnown RBP31.94■■■□□ 2.7
CENPM-204ENST00000402420 CADPSQ9ULU8 1353 aa31.89■■■□□ 2.7
CENPM-204ENST00000402420 CUX2O14529 1486 aa31.78■■■□□ 2.68
CENPM-204ENST00000402420 PDS5BQ9NTI5 1447 aa31.77■■■□□ 2.68
CENPM-204ENST00000402420 KIF21AQ7Z4S6 1674 aa31.76■■■□□ 2.67
CENPM-204ENST00000402420 THOC2Q8NI27 1593 aaKnown RBP31.7■■■□□ 2.67
CENPM-204ENST00000402420 CCDC88BA6NC98 1476 aa31.65■■■□□ 2.66
CENPM-204ENST00000402420 CFTRP13569 1480 aa31.64■■■□□ 2.66
CENPM-204ENST00000402420 FANCD2Q9BXW9 1451 aa31.53■■■□□ 2.64
CENPM-204ENST00000402420 MRC2Q9UBG0 1479 aa31.5■■■□□ 2.63
CENPM-204ENST00000402420 CEP164Q9UPV0 1460 aa31.48■■■□□ 2.63
CENPM-204ENST00000402420 SUPT5HO00267 1087 aaKnown RBP31.39■■■□□ 2.62
CENPM-204ENST00000402420 WDR62O43379 1518 aa31.39■■■□□ 2.61
CENPM-204ENST00000402420 URB2Q14146 1524 aaKnown RBP31.28■■■□□ 2.6
CENPM-204ENST00000402420 PRDM2Q13029 1718 aa31.24■■■□□ 2.59
CENPM-204ENST00000402420 DNAJC5Q9H3Z4 198 aa31.21■■■□□ 2.59
CENPM-204ENST00000402420 TOPBP1Q92547 1522 aa31.01■■■□□ 2.55
CENPM-204ENST00000402420 DNMBPQ6XZF7 1577 aa30.9■■■□□ 2.54
CENPM-204ENST00000402420 ABCC8Q09428 1581 aa30.85■■■□□ 2.53
CENPM-204ENST00000402420 ZNF608Q9ULD9 1512 aaPredicted RBP30.83■■■□□ 2.53
CENPM-204ENST00000402420 IFT140Q96RY7 1462 aa30.82■■■□□ 2.53
CENPM-204ENST00000402420 POLA1P09884 1462 aaPredicted RBP30.74■■■□□ 2.51
CENPM-204ENST00000402420 CUX1P39880 1505 aa30.73■■■□□ 2.51
CENPM-204ENST00000402420 RAD54L2Q9Y4B4 1467 aa30.7■■■□□ 2.5
CENPM-204ENST00000402420 TARBP1Q13395 1621 aaKnown RBP30.66■■■□□ 2.5
CENPM-204ENST00000402420 FGD5Q6ZNL6 1462 aa30.64■■■□□ 2.5
CENPM-204ENST00000402420 AQRO60306 1485 aaKnown RBP eCLIP30.63■■■□□ 2.492e-7■■■■■ 48
CENPM-204ENST00000402420 SOGA1O94964 1423 aa30.62■■■□□ 2.49
CENPM-204ENST00000402420 EIF4G3O43432 1585 aaKnown RBP30.6■■■□□ 2.49
CENPM-204ENST00000402420 TDRD9Q8NDG6 1382 aaKnown RBP30.54■■■□□ 2.48
CENPM-204ENST00000402420 OSCARQ8IYS5 282 aa30.5■■■□□ 2.47
CENPM-204ENST00000402420 WRNQ14191 1432 aaPredicted RBP eCLIP30.39■■■□□ 2.46
CENPM-204ENST00000402420 SYNJ1O43426 1573 aa30.37■■■□□ 2.45
CENPM-204ENST00000402420 FBLN2P98095 1184 aa30.32■■■□□ 2.44
CENPM-204ENST00000402420 WDR97A6NE52 1622 aa30.32■■■□□ 2.44
CENPM-204ENST00000402420 TOP2BQ02880 1626 aa30.3■■■□□ 2.44
CENPM-204ENST00000402420 SNAPC4Q5SXM2 1469 aa30.29■■■□□ 2.44
CENPM-204ENST00000402420 BIVM-ERCC5R4GMW8 1640 aa30.29■■■□□ 2.44
CENPM-204ENST00000402420 ABCA10Q8WWZ4 1543 aa30.27■■■□□ 2.44
CENPM-204ENST00000402420 CHD1O14646 1710 aa30.25■■■□□ 2.43
CENPM-204ENST00000402420 GRIN2BQ13224 1484 aa30.24■■■□□ 2.43
CENPM-204ENST00000402420 GAPVD1Q14C86 1478 aa30.23■■■□□ 2.43
CENPM-204ENST00000402420 TRIM41Q8WV44 630 aa30.18■■■□□ 2.42
CENPM-204ENST00000402420 ABCA5Q8WWZ7 1642 aa30.17■■■□□ 2.42
CENPM-204ENST00000402420 MAGI1Q96QZ7 1491 aaPredicted RBP30.14■■■□□ 2.42
CENPM-204ENST00000402420 CHMP7Q8WUX9 453 aaPredicted RBP30.13■■■□□ 2.41
CENPM-204ENST00000402420 PBRM1Q86U86 1689 aa30.13■■■□□ 2.41
CENPM-204ENST00000402420 SYNJ2O15056 1496 aa30.06■■■□□ 2.4
CENPM-204ENST00000402420 RIMBP3CA6NJZ7 1639 aa30.04■■■□□ 2.4
CENPM-204ENST00000402420 RIMBP3BA6NNM3 1639 aa30.04■■■□□ 2.4
CENPM-204ENST00000402420 RIMBP3Q9UFD9 1639 aa30.04■■■□□ 2.4
CENPM-204ENST00000402420 ARHGEF11O15085 1522 aa30.01■■■□□ 2.4
CENPM-204ENST00000402420 CLASP1Q7Z460 1538 aa29.93■■■□□ 2.38
CENPM-204ENST00000402420 ADAMTS12P58397 1594 aa29.92■■■□□ 2.38
CENPM-204ENST00000402420 GRIN2AQ12879 1464 aa29.87■■■□□ 2.37
CENPM-204ENST00000402420 ERICH3Q5RHP9 1530 aa29.86■■■□□ 2.37
CENPM-204ENST00000402420 FHAD1B1AJZ9 1412 aa29.85■■■□□ 2.37
CENPM-204ENST00000402420 CYB5RLQ6IPT4 315 aa29.83■■■□□ 2.37
CENPM-204ENST00000402420 ARAP1Q96P48 1450 aa29.8■■■□□ 2.36
CENPM-204ENST00000402420 CEP170Q5SW79 1584 aa29.77■■■□□ 2.36
CENPM-204ENST00000402420 KIF27Q86VH2 1401 aa29.75■■■□□ 2.35
CENPM-204ENST00000402420 NUP160Q12769 1436 aa29.74■■■□□ 2.35
CENPM-204ENST00000402420 IGF1RP08069 1367 aa29.74■■■□□ 2.35
CENPM-204ENST00000402420 ERCC6L2Q5T890 1561 aa29.63■■■□□ 2.33
CENPM-204ENST00000402420 RUSC2Q8N2Y8 1516 aa29.59■■■□□ 2.33
CENPM-204ENST00000402420 CARMIL1Q5VZK9 1371 aa29.52■■■□□ 2.32
CENPM-204ENST00000402420 CUL7Q14999 1698 aa29.51■■■□□ 2.31
CENPM-204ENST00000402420 SHROOM2Q13796 1616 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms