RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 NISCHQ9Y2I1 1504 aa36.81■■■■□ 3.48
CHKA-201ENST00000265689 CCDC180Q9P1Z9 1646 aa31.85■■■□□ 2.69
CHKA-201ENST00000265689 DCAF8L2P0C7V8 631 aa30.98■■■□□ 2.55
CHKA-201ENST00000265689 ZCCHC6Q5VYS8 1495 aaKnown RBP30.93■■■□□ 2.54
CHKA-201ENST00000265689 SHROOM4Q9ULL8 1493 aa30.68■■■□□ 2.5
CHKA-201ENST00000265689 ABCC9O60706 1549 aa30.66■■■□□ 2.5
CHKA-201ENST00000265689 DCAF1Q9Y4B6 1507 aa30.19■■■□□ 2.42
CHKA-201ENST00000265689 SUPT5HO00267 1087 aaKnown RBP29.8■■■□□ 2.36
CHKA-201ENST00000265689 SCRIBQ14160 1630 aa29.78■■■□□ 2.36
CHKA-201ENST00000265689 NACADO15069 1562 aa29.68■■■□□ 2.34
CHKA-201ENST00000265689 MYO15BQ96JP2 1530 aa29.65■■■□□ 2.34
CHKA-201ENST00000265689 RB1CC1Q8TDY2 1594 aa29.51■■■□□ 2.31
CHKA-201ENST00000265689 UNC13AQ9UPW8 1703 aa29.21■■■□□ 2.27
CHKA-201ENST00000265689 PABPN1Q86U42 306 aaKnown RBP eCLIP29.08■■■□□ 2.253e-8■■□□□ 12.7
CHKA-201ENST00000265689 CECR2Q9BXF3 1484 aa28.9■■■□□ 2.22
CHKA-201ENST00000265689 BICRAQ9NZM4 1560 aa28.83■■■□□ 2.21
CHKA-201ENST00000265689 RSF1Q96T23 1441 aaPredicted RBP28.78■■■□□ 2.2
CHKA-201ENST00000265689 CHIC1Q5VXU3 224 aa28.74■■■□□ 2.19
CHKA-201ENST00000265689 MROH2BQ7Z745 1585 aa28.64■■■□□ 2.18
CHKA-201ENST00000265689 WIZO95785 1651 aa28.46■■■□□ 2.15
CHKA-201ENST00000265689 BAZ1AQ9NRL2 1556 aaPredicted RBP28.34■■■□□ 2.13
CHKA-201ENST00000265689 SMARCA4P51532 1647 aa28.32■■■□□ 2.12
CHKA-201ENST00000265689 EIF4G1Q04637 1599 aaKnown RBP27.93■■■□□ 2.06
CHKA-201ENST00000265689 TOP2AP11388 1531 aaKnown RBP27.88■■■□□ 2.05
CHKA-201ENST00000265689 ATAD2BQ9ULI0 1458 aa27.87■■■□□ 2.05
CHKA-201ENST00000265689 TRIM41Q8WV44 630 aa27.86■■■□□ 2.05
CHKA-201ENST00000265689 LOC105371045A0A1W2PR82 267 aa27.8■■■□□ 2.04
CHKA-201ENST00000265689 CCDC88BA6NC98 1476 aa27.77■■■□□ 2.04
CHKA-201ENST00000265689 PEG3Q9GZU2 1588 aa27.76■■■□□ 2.04
CHKA-201ENST00000265689 SMARCA2P51531 1590 aa27.74■■■□□ 2.03
CHKA-201ENST00000265689 BAZ1BQ9UIG0 1483 aaKnown RBP27.72■■■□□ 2.03
CHKA-201ENST00000265689 CC2D2AQ9P2K1 1620 aa27.58■■■□□ 2.01
CHKA-201ENST00000265689 FAM9AQ8IZU1 332 aaPredicted RBP27.54■■■□□ 2
CHKA-201ENST00000265689 NCAPD3P42695 1498 aa27.48■■□□□ 1.99
CHKA-201ENST00000265689 ABCC8Q09428 1581 aa27.41■■□□□ 1.98
CHKA-201ENST00000265689 DNAJC5BQ9UF47 199 aa27.39■■□□□ 1.97
CHKA-201ENST00000265689 HMGXB3Q12766 1538 aa27.38■■□□□ 1.97
CHKA-201ENST00000265689 EHMT2Q96KQ7 1210 aa27.26■■□□□ 1.95
CHKA-201ENST00000265689 PCGF6Q9BYE7 350 aa27.12■■□□□ 1.93
CHKA-201ENST00000265689 WRNQ14191 1432 aaPredicted RBP eCLIP27.05■■□□□ 1.92
CHKA-201ENST00000265689 SOGA1O94964 1423 aa27.01■■□□□ 1.91
CHKA-201ENST00000265689 NESP48681 1621 aa26.98■■□□□ 1.91
CHKA-201ENST00000265689 SYNJ1O43426 1573 aa26.97■■□□□ 1.91
CHKA-201ENST00000265689 CFTRP13569 1480 aa26.95■■□□□ 1.9
CHKA-201ENST00000265689 RUSC2Q8N2Y8 1516 aa26.91■■□□□ 1.9
CHKA-201ENST00000265689 CADPSQ9ULU8 1353 aa26.88■■□□□ 1.89
CHKA-201ENST00000265689 EEA1Q15075 1411 aa26.84■■□□□ 1.89
CHKA-201ENST00000265689 CSRNP3Q8WYN3 585 aa26.82■■□□□ 1.88
CHKA-201ENST00000265689 TRIM26Q12899 539 aaPredicted RBP26.82■■□□□ 1.88
CHKA-201ENST00000265689 CUX1P39880 1505 aa26.73■■□□□ 1.87
CHKA-201ENST00000265689 PRDM2Q13029 1718 aa26.72■■□□□ 1.87
CHKA-201ENST00000265689 HRCP23327 699 aa26.72■■□□□ 1.87
CHKA-201ENST00000265689 TOP2BQ02880 1626 aa26.69■■□□□ 1.86
CHKA-201ENST00000265689 FANCD2Q9BXW9 1451 aa26.66■■□□□ 1.86
CHKA-201ENST00000265689 TNIKQ9UKE5 1360 aa26.64■■□□□ 1.86
CHKA-201ENST00000265689 BIVM-ERCC5R4GMW8 1640 aa26.62■■□□□ 1.85
CHKA-201ENST00000265689 UBTFP17480 764 aaKnown RBP26.62■■□□□ 1.85
CHKA-201ENST00000265689 CEP162Q5TB80 1403 aa26.6■■□□□ 1.85
CHKA-201ENST00000265689 GOLGA3Q08378 1498 aa26.59■■□□□ 1.85
CHKA-201ENST00000265689 PPARGC1BQ86YN6 1023 aaKnown RBP26.54■■□□□ 1.84
CHKA-201ENST00000265689 LAMC3Q9Y6N6 1575 aa26.52■■□□□ 1.84
CHKA-201ENST00000265689 CEP164Q9UPV0 1460 aa26.52■■□□□ 1.84
CHKA-201ENST00000265689 KIF21AQ7Z4S6 1674 aa26.51■■□□□ 1.83
CHKA-201ENST00000265689 KIF21BO75037 1637 aa26.5■■□□□ 1.83
CHKA-201ENST00000265689 FGD5Q6ZNL6 1462 aa26.42■■□□□ 1.82
CHKA-201ENST00000265689 RAPGEF2Q9Y4G8 1499 aa26.39■■□□□ 1.82
CHKA-201ENST00000265689 URB2Q14146 1524 aaKnown RBP26.39■■□□□ 1.81
CHKA-201ENST00000265689 TOPBP1Q92547 1522 aa26.36■■□□□ 1.81
CHKA-201ENST00000265689 RAD54L2Q9Y4B4 1467 aa26.36■■□□□ 1.81
CHKA-201ENST00000265689 PDS5BQ9NTI5 1447 aa26.35■■□□□ 1.81
CHKA-201ENST00000265689 DNMBPQ6XZF7 1577 aa26.3■■□□□ 1.8
CHKA-201ENST00000265689 RANGAP1P46060 587 aaPredicted RBP26.3■■□□□ 1.8
CHKA-201ENST00000265689 KIF27Q86VH2 1401 aa26.28■■□□□ 1.8
CHKA-201ENST00000265689 CUX2O14529 1486 aa26.28■■□□□ 1.8
CHKA-201ENST00000265689 POLA1P09884 1462 aaPredicted RBP26.28■■□□□ 1.8
CHKA-201ENST00000265689 PRXQ9BXM0 1461 aa26.25■■□□□ 1.79
CHKA-201ENST00000265689 CLIP1P30622 1438 aa26.25■■□□□ 1.79
CHKA-201ENST00000265689 TTBK1Q5TCY1 1321 aaPredicted RBP26.21■■□□□ 1.79
CHKA-201ENST00000265689 ERICH3Q5RHP9 1530 aa26.19■■□□□ 1.78
CHKA-201ENST00000265689 ERCC6Q03468 1493 aa26.14■■□□□ 1.77
CHKA-201ENST00000265689 TDRD9Q8NDG6 1382 aaKnown RBP26.12■■□□□ 1.77
CHKA-201ENST00000265689 IGF1RP08069 1367 aa26.07■■□□□ 1.76
CHKA-201ENST00000265689 VPS8Q8N3P4 1428 aa26.06■■□□□ 1.76
CHKA-201ENST00000265689 MRC2Q9UBG0 1479 aa26.06■■□□□ 1.76
CHKA-201ENST00000265689 ABCA10Q8WWZ4 1543 aa26.02■■□□□ 1.76
CHKA-201ENST00000265689 WDR97A6NE52 1622 aa25.97■■□□□ 1.75
CHKA-201ENST00000265689 ZEB1P37275 1124 aaPredicted RBP25.95■■□□□ 1.74
CHKA-201ENST00000265689 TARBP1Q13395 1621 aaKnown RBP25.95■■□□□ 1.74
CHKA-201ENST00000265689 AQRO60306 1485 aaKnown RBP eCLIP25.93■■□□□ 1.745e-7■■■■□ 23.6
CHKA-201ENST00000265689 CARMIL1Q5VZK9 1371 aa25.93■■□□□ 1.74
CHKA-201ENST00000265689 ARAP1Q96P48 1450 aa25.92■■□□□ 1.74
CHKA-201ENST00000265689 THOC2Q8NI27 1593 aaKnown RBP25.91■■□□□ 1.74
CHKA-201ENST00000265689 ZNF608Q9ULD9 1512 aaPredicted RBP25.91■■□□□ 1.74
CHKA-201ENST00000265689 WDR62O43379 1518 aa25.9■■□□□ 1.74
CHKA-201ENST00000265689 APLP2Q06481 763 aa25.88■■□□□ 1.73
CHKA-201ENST00000265689 GAPVD1Q14C86 1478 aa25.86■■□□□ 1.73
CHKA-201ENST00000265689 ABCA5Q8WWZ7 1642 aa25.86■■□□□ 1.73
CHKA-201ENST00000265689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.84■■□□□ 1.73
CHKA-201ENST00000265689 ARHGAP35Q9NRY4 1499 aa25.8■■□□□ 1.72
CHKA-201ENST00000265689 CCER1Q8TC90 406 aaPredicted RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms