RNA–Protein interactions for RNA: ENST00000378163.5

CASK-203, Transcript of calcium/calmodulin dependent serine protein kinase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CASK, Length 4,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASK-203ENST00000378163 NISCHQ9Y2I1 1504 aa29.96■■■□□ 2.39
CASK-203ENST00000378163 DCAF8L2P0C7V8 631 aa29.75■■■□□ 2.35
CASK-203ENST00000378163 SUPT5HO00267 1087 aaKnown RBP28.45■■■□□ 2.14
CASK-203ENST00000378163 SHROOM4Q9ULL8 1493 aa28.16■■■□□ 2.1
CASK-203ENST00000378163 EHMT2Q96KQ7 1210 aa27.5■■□□□ 1.99
CASK-203ENST00000378163 FAM9AQ8IZU1 332 aaPredicted RBP26.82■■□□□ 1.88
CASK-203ENST00000378163 PCGF6Q9BYE7 350 aa26.6■■□□□ 1.85
CASK-203ENST00000378163 TTBK1Q5TCY1 1321 aaPredicted RBP26.47■■□□□ 1.83
CASK-203ENST00000378163 RANGAP1P46060 587 aaPredicted RBP26.16■■□□□ 1.78
CASK-203ENST00000378163 TRIM41Q8WV44 630 aa26.14■■□□□ 1.77
CASK-203ENST00000378163 APLP2Q06481 763 aa26.1■■□□□ 1.77
CASK-203ENST00000378163 CHIC1Q5VXU3 224 aa26■■□□□ 1.75
CASK-203ENST00000378163 LOC105371045A0A1W2PR82 267 aa25.86■■□□□ 1.73
CASK-203ENST00000378163 PPARGC1BQ86YN6 1023 aaKnown RBP25.8■■□□□ 1.72
CASK-203ENST00000378163 HRCP23327 699 aa25.73■■□□□ 1.71
CASK-203ENST00000378163 UBTFP17480 764 aaKnown RBP25.71■■□□□ 1.71
CASK-203ENST00000378163 CCER1Q8TC90 406 aaPredicted RBP25.6■■□□□ 1.69
CASK-203ENST00000378163 ATP1B4Q9UN42 357 aaPredicted RBP25.6■■□□□ 1.69
CASK-203ENST00000378163 TRIM26Q12899 539 aaPredicted RBP25.47■■□□□ 1.67
CASK-203ENST00000378163 ZEB1P37275 1124 aaPredicted RBP25.41■■□□□ 1.66
CASK-203ENST00000378163 PELP1Q8IZL8 1130 aaKnown RBP25.07■■□□□ 1.6
CASK-203ENST00000378163 YTHDC1Q96MU7 727 aaKnown RBP25.03■■□□□ 1.6
CASK-203ENST00000378163 ZCCHC6Q5VYS8 1495 aaKnown RBP25.02■■□□□ 1.6
CASK-203ENST00000378163 PABPN1Q86U42 306 aaKnown RBP eCLIP25■■□□□ 1.59
CASK-203ENST00000378163 ITGAEP38570 1179 aa25■■□□□ 1.59
CASK-203ENST00000378163 ABCC9O60706 1549 aa24.99■■□□□ 1.59
CASK-203ENST00000378163 CENPBP07199 599 aaPredicted RBP24.97■■□□□ 1.59
CASK-203ENST00000378163 HNRNPUL2Q1KMD3 747 aaKnown RBP24.89■■□□□ 1.58
CASK-203ENST00000378163 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.85■■□□□ 1.57
CASK-203ENST00000378163 MYO15BQ96JP2 1530 aa24.74■■□□□ 1.55
CASK-203ENST00000378163 CNGB1Q14028 1251 aaPredicted RBP24.45■■□□□ 1.5
CASK-203ENST00000378163 CCDC180Q9P1Z9 1646 aa24.45■■□□□ 1.5
CASK-203ENST00000378163 DIEXFQ68CQ4 756 aaKnown RBP24.41■■□□□ 1.5
CASK-203ENST00000378163 SCRIBQ14160 1630 aa24.41■■□□□ 1.5
CASK-203ENST00000378163 POLR3GLQ9BT43 218 aa24.39■■□□□ 1.5
CASK-203ENST00000378163 DCAF1Q9Y4B6 1507 aa24.38■■□□□ 1.49
CASK-203ENST00000378163 NEFLP07196 543 aa24.32■■□□□ 1.48
CASK-203ENST00000378163 MYT1LQ9UL68 1186 aa24.27■■□□□ 1.48
CASK-203ENST00000378163 FAM50AQ14320 339 aaKnown RBP24.23■■□□□ 1.47
CASK-203ENST00000378163 ERICH6Q7L0X2 663 aa24.21■■□□□ 1.47
CASK-203ENST00000378163 CSRNP3Q8WYN3 585 aa24.13■■□□□ 1.45
CASK-203ENST00000378163 RSF1Q96T23 1441 aaPredicted RBP24.12■■□□□ 1.45
CASK-203ENST00000378163 NEUROD1Q13562 356 aa24.08■■□□□ 1.44
CASK-203ENST00000378163 P3H3Q8IVL6 736 aa24.08■■□□□ 1.44
CASK-203ENST00000378163 GTF3C3Q9Y5Q9 886 aa24.06■■□□□ 1.44
CASK-203ENST00000378163 ARID3CA6NKF2 412 aa23.98■■□□□ 1.43
CASK-203ENST00000378163 FBLN2P98095 1184 aa23.95■■□□□ 1.42
CASK-203ENST00000378163 TRIM52Q96A61 297 aa23.95■■□□□ 1.42
CASK-203ENST00000378163 ZNF316A6NFI3 1004 aaPredicted RBP23.92■■□□□ 1.42
CASK-203ENST00000378163 ACIN1Q9UKV3 1341 aaKnown RBP23.89■■□□□ 1.41
CASK-203ENST00000378163 ZNF326Q5BKZ1 582 aaKnown RBP23.76■■□□□ 1.39
CASK-203ENST00000378163 SCAF1Q9H7N4 1312 aaKnown RBP23.72■■□□□ 1.39
CASK-203ENST00000378163 CECR2Q9BXF3 1484 aa23.72■■□□□ 1.39
CASK-203ENST00000378163 SLC4A1APQ9BWU0 796 aaKnown RBP23.7■■□□□ 1.39
CASK-203ENST00000378163 BCANQ96GW7 911 aa23.65■■□□□ 1.38
CASK-203ENST00000378163 RB1CC1Q8TDY2 1594 aa23.56■■□□□ 1.36
CASK-203ENST00000378163 CEP162Q5TB80 1403 aa23.53■■□□□ 1.36
CASK-203ENST00000378163 MYT1Q01538 1121 aa23.52■■□□□ 1.36
CASK-203ENST00000378163 ZNF777Q9ULD5 760 aaPredicted RBP23.52■■□□□ 1.36
CASK-203ENST00000378163 ANP32CO43423 234 aa23.45■■□□□ 1.34
CASK-203ENST00000378163 MIER1Q8N108 512 aa23.44■■□□□ 1.34
CASK-203ENST00000378163 MROH2BQ7Z745 1585 aa23.41■■□□□ 1.34
CASK-203ENST00000378163 NACADO15069 1562 aa23.41■■□□□ 1.34
CASK-203ENST00000378163 CLIP1P30622 1438 aa23.4■■□□□ 1.34
CASK-203ENST00000378163 SOGA1O94964 1423 aa23.34■■□□□ 1.33
CASK-203ENST00000378163 DAXXQ9UER7 740 aaPredicted RBP23.34■■□□□ 1.33
CASK-203ENST00000378163 CHIC2Q9UKJ5 165 aa23.32■■□□□ 1.32
CASK-203ENST00000378163 TNIKQ9UKE5 1360 aa23.31■■□□□ 1.32
CASK-203ENST00000378163 WRNQ14191 1432 aaPredicted RBP eCLIP23.3■■□□□ 1.32
CASK-203ENST00000378163 GOLGA3Q08378 1498 aa23.27■■□□□ 1.32
CASK-203ENST00000378163 DDX10Q13206 875 aaKnown RBP23.25■■□□□ 1.31
CASK-203ENST00000378163 BAZ1AQ9NRL2 1556 aaPredicted RBP23.23■■□□□ 1.31
CASK-203ENST00000378163 EEA1Q15075 1411 aa23.23■■□□□ 1.31
CASK-203ENST00000378163 HIRIP3Q9BW71 556 aaPredicted RBP23.22■■□□□ 1.31
CASK-203ENST00000378163 CLSPNQ9HAW4 1339 aa23.22■■□□□ 1.31
CASK-203ENST00000378163 ABCC8Q09428 1581 aa23.21■■□□□ 1.31
CASK-203ENST00000378163 CCDC88BA6NC98 1476 aa23.19■■□□□ 1.3
CASK-203ENST00000378163 CDK11AQ9UQ88 783 aaPredicted RBP23.17■■□□□ 1.3
CASK-203ENST00000378163 WIZO95785 1651 aa23.11■■□□□ 1.29
CASK-203ENST00000378163 TONSLQ96HA7 1378 aa23.1■■□□□ 1.29
CASK-203ENST00000378163 CEP164Q9UPV0 1460 aa23.06■■□□□ 1.28
CASK-203ENST00000378163 FKBP8Q14318 412 aa23.05■■□□□ 1.28
CASK-203ENST00000378163 BCL11AQ9H165 835 aa23.04■■□□□ 1.28
CASK-203ENST00000378163 BAZ1BQ9UIG0 1483 aaKnown RBP23.02■■□□□ 1.28
CASK-203ENST00000378163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23■■□□□ 1.27
CASK-203ENST00000378163 SALL2Q9Y467 1007 aaPredicted RBP22.99■■□□□ 1.27
CASK-203ENST00000378163 FAM9BQ8IZU0 186 aa22.98■■□□□ 1.27
CASK-203ENST00000378163 RRP7BPQ9NSQ0 103 aa22.98■■□□□ 1.27
CASK-203ENST00000378163 MTUS2Q5JR59 1369 aa22.98■■□□□ 1.27
CASK-203ENST00000378163 HNRNPUQ00839 825 aaKnown RBP eCLIP22.97■■□□□ 1.27
CASK-203ENST00000378163 CHGAP10645 457 aaKnown RBP22.97■■□□□ 1.27
CASK-203ENST00000378163 KDM2AQ9Y2K7 1162 aa22.93■■□□□ 1.26
CASK-203ENST00000378163 CHMP7Q8WUX9 453 aaPredicted RBP22.93■■□□□ 1.26
CASK-203ENST00000378163 RUSC2Q8N2Y8 1516 aa22.88■■□□□ 1.25
CASK-203ENST00000378163 RTL5Q5HYW3 569 aaPredicted RBP22.87■■□□□ 1.25
CASK-203ENST00000378163 KANK4Q5T7N3 995 aaPredicted RBP22.87■■□□□ 1.25
CASK-203ENST00000378163 SIN3AQ96ST3 1273 aa22.85■■□□□ 1.25
CASK-203ENST00000378163 KIF27Q86VH2 1401 aa22.84■■□□□ 1.25
CASK-203ENST00000378163 SENP3-EIF4A1A0A087X0R7 540 aa22.83■■□□□ 1.25
CASK-203ENST00000378163 PLPPR3Q6T4P5 718 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms