RNA–Protein interactions for RNA: ENST00000465675.5

LRP8-207, Transcript of LDL receptor related protein 8, humanhuman

TSL 2 BASIC

Gene LRP8, Length 2,670 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-207ENST00000465675 NISCHQ9Y2I1 1504 aa35.51■■■■□ 3.27
LRP8-207ENST00000465675 SHROOM4Q9ULL8 1493 aa30.39■■■□□ 2.46
LRP8-207ENST00000465675 CCDC180Q9P1Z9 1646 aa30.11■■■□□ 2.41
LRP8-207ENST00000465675 ZCCHC6Q5VYS8 1495 aaKnown RBP30.01■■■□□ 2.39
LRP8-207ENST00000465675 SUPT5HO00267 1087 aaKnown RBP29.73■■■□□ 2.35
LRP8-207ENST00000465675 DCAF8L2P0C7V8 631 aa29.6■■■□□ 2.33
LRP8-207ENST00000465675 DCAF1Q9Y4B6 1507 aa29.03■■■□□ 2.24
LRP8-207ENST00000465675 CHIC1Q5VXU3 224 aa28.84■■■□□ 2.21
LRP8-207ENST00000465675 MYO15BQ96JP2 1530 aa28.78■■■□□ 2.2
LRP8-207ENST00000465675 SCRIBQ14160 1630 aa28.37■■■□□ 2.13
LRP8-207ENST00000465675 ABCC9O60706 1549 aa28.29■■■□□ 2.12
LRP8-207ENST00000465675 RSF1Q96T23 1441 aaPredicted RBP28.12■■■□□ 2.09
LRP8-207ENST00000465675 LOC105371045A0A1W2PR82 267 aa28.08■■■□□ 2.09
LRP8-207ENST00000465675 PCGF6Q9BYE7 350 aa27.9■■■□□ 2.06
LRP8-207ENST00000465675 NACADO15069 1562 aa27.88■■■□□ 2.05
LRP8-207ENST00000465675 RB1CC1Q8TDY2 1594 aa27.83■■■□□ 2.05
LRP8-207ENST00000465675 CECR2Q9BXF3 1484 aa27.81■■■□□ 2.04
LRP8-207ENST00000465675 HRCP23327 699 aa27.78■■■□□ 2.04
LRP8-207ENST00000465675 MROH2BQ7Z745 1585 aa27.67■■■□□ 2.02
LRP8-207ENST00000465675 TRIM41Q8WV44 630 aa27.62■■■□□ 2.01
LRP8-207ENST00000465675 WIZO95785 1651 aa27.52■■■□□ 2
LRP8-207ENST00000465675 FAM9AQ8IZU1 332 aaPredicted RBP27.51■■□□□ 1.99
LRP8-207ENST00000465675 PPARGC1BQ86YN6 1023 aaKnown RBP27.39■■□□□ 1.97
LRP8-207ENST00000465675 EHMT2Q96KQ7 1210 aa27.36■■□□□ 1.97
LRP8-207ENST00000465675 TRIM26Q12899 539 aaPredicted RBP27.28■■□□□ 1.96
LRP8-207ENST00000465675 BAZ1AQ9NRL2 1556 aaPredicted RBP27.24■■□□□ 1.95
LRP8-207ENST00000465675 UNC13AQ9UPW8 1703 aa27.15■■□□□ 1.94
LRP8-207ENST00000465675 EIF4G1Q04637 1599 aaKnown RBP27.07■■□□□ 1.92
LRP8-207ENST00000465675 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
LRP8-207ENST00000465675 TOP2AP11388 1531 aaKnown RBP26.99■■□□□ 1.91
LRP8-207ENST00000465675 PABPN1Q86U42 306 aaKnown RBP eCLIP26.97■■□□□ 1.91
LRP8-207ENST00000465675 CCDC88BA6NC98 1476 aa26.96■■□□□ 1.91
LRP8-207ENST00000465675 ABCC8Q09428 1581 aa26.91■■□□□ 1.9
LRP8-207ENST00000465675 SMARCA2P51531 1590 aa26.89■■□□□ 1.9
LRP8-207ENST00000465675 BICRAQ9NZM4 1560 aa26.82■■□□□ 1.88
LRP8-207ENST00000465675 SOGA1O94964 1423 aa26.65■■□□□ 1.86
LRP8-207ENST00000465675 RUSC2Q8N2Y8 1516 aa26.56■■□□□ 1.84
LRP8-207ENST00000465675 ZEB1P37275 1124 aaPredicted RBP26.52■■□□□ 1.84
LRP8-207ENST00000465675 PEG3Q9GZU2 1588 aa26.48■■□□□ 1.83
LRP8-207ENST00000465675 TTBK1Q5TCY1 1321 aaPredicted RBP26.43■■□□□ 1.82
LRP8-207ENST00000465675 CSRNP3Q8WYN3 585 aa26.42■■□□□ 1.82
LRP8-207ENST00000465675 CEP162Q5TB80 1403 aa26.42■■□□□ 1.82
LRP8-207ENST00000465675 ATAD2BQ9ULI0 1458 aa26.39■■□□□ 1.82
LRP8-207ENST00000465675 WRNQ14191 1432 aaPredicted RBP eCLIP26.37■■□□□ 1.81
LRP8-207ENST00000465675 TNIKQ9UKE5 1360 aa26.34■■□□□ 1.81
LRP8-207ENST00000465675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.33■■□□□ 1.81
LRP8-207ENST00000465675 UBTFP17480 764 aaKnown RBP26.33■■□□□ 1.81
LRP8-207ENST00000465675 SYNJ1O43426 1573 aa26.3■■□□□ 1.8
LRP8-207ENST00000465675 BAZ1BQ9UIG0 1483 aaKnown RBP26.29■■□□□ 1.8
LRP8-207ENST00000465675 EEA1Q15075 1411 aa26.29■■□□□ 1.8
LRP8-207ENST00000465675 GOLGA3Q08378 1498 aa26.19■■□□□ 1.78
LRP8-207ENST00000465675 CCER1Q8TC90 406 aaPredicted RBP26.17■■□□□ 1.78
LRP8-207ENST00000465675 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
LRP8-207ENST00000465675 KIF21BO75037 1637 aa26■■□□□ 1.75
LRP8-207ENST00000465675 RAPGEF2Q9Y4G8 1499 aa25.97■■□□□ 1.75
LRP8-207ENST00000465675 RANGAP1P46060 587 aaPredicted RBP25.96■■□□□ 1.75
LRP8-207ENST00000465675 CLIP1P30622 1438 aa25.93■■□□□ 1.74
LRP8-207ENST00000465675 TOP2BQ02880 1626 aa25.91■■□□□ 1.74
LRP8-207ENST00000465675 NCAPD3P42695 1498 aa25.85■■□□□ 1.73
LRP8-207ENST00000465675 BIVM-ERCC5R4GMW8 1640 aa25.8■■□□□ 1.72
LRP8-207ENST00000465675 HMGXB3Q12766 1538 aa25.8■■□□□ 1.72
LRP8-207ENST00000465675 VPS8Q8N3P4 1428 aa25.78■■□□□ 1.72
LRP8-207ENST00000465675 HNRNPUL2Q1KMD3 747 aaKnown RBP25.76■■□□□ 1.71
LRP8-207ENST00000465675 CUX1P39880 1505 aa25.74■■□□□ 1.71
LRP8-207ENST00000465675 PRXQ9BXM0 1461 aa25.66■■□□□ 1.7
LRP8-207ENST00000465675 CFTRP13569 1480 aa25.64■■□□□ 1.7
LRP8-207ENST00000465675 APLP2Q06481 763 aa25.63■■□□□ 1.69
LRP8-207ENST00000465675 SCAF1Q9H7N4 1312 aaKnown RBP25.61■■□□□ 1.69
LRP8-207ENST00000465675 DIEXFQ68CQ4 756 aaKnown RBP25.6■■□□□ 1.69
LRP8-207ENST00000465675 ERICH3Q5RHP9 1530 aa25.58■■□□□ 1.68
LRP8-207ENST00000465675 ARAP1Q96P48 1450 aa25.56■■□□□ 1.68
LRP8-207ENST00000465675 KIF27Q86VH2 1401 aa25.53■■□□□ 1.68
LRP8-207ENST00000465675 KANK4Q5T7N3 995 aaPredicted RBP25.5■■□□□ 1.67
LRP8-207ENST00000465675 ZNF316A6NFI3 1004 aaPredicted RBP25.42■■□□□ 1.66
LRP8-207ENST00000465675 NEUROD1Q13562 356 aa25.39■■□□□ 1.65
LRP8-207ENST00000465675 CADPSQ9ULU8 1353 aa25.38■■□□□ 1.65
LRP8-207ENST00000465675 CUX2O14529 1486 aa25.36■■□□□ 1.65
LRP8-207ENST00000465675 PRDM2Q13029 1718 aa25.35■■□□□ 1.65
LRP8-207ENST00000465675 ARHGAP35Q9NRY4 1499 aa25.35■■□□□ 1.65
LRP8-207ENST00000465675 IGF1RP08069 1367 aa25.34■■□□□ 1.65
LRP8-207ENST00000465675 ACIN1Q9UKV3 1341 aaKnown RBP25.33■■□□□ 1.64
LRP8-207ENST00000465675 CC2D2AQ9P2K1 1620 aa25.29■■□□□ 1.64
LRP8-207ENST00000465675 FGD5Q6ZNL6 1462 aa25.28■■□□□ 1.64
LRP8-207ENST00000465675 CARMIL1Q5VZK9 1371 aa25.2■■□□□ 1.62
LRP8-207ENST00000465675 DHX57Q6P158 1386 aaKnown RBP25.19■■□□□ 1.62
LRP8-207ENST00000465675 RRBP1Q9P2E9 1410 aaKnown RBP25.17■■□□□ 1.62
LRP8-207ENST00000465675 FANCD2Q9BXW9 1451 aa25.15■■□□□ 1.62
LRP8-207ENST00000465675 MIER1Q8N108 512 aa25.14■■□□□ 1.61
LRP8-207ENST00000465675 ITGAEP38570 1179 aa25.13■■□□□ 1.61
LRP8-207ENST00000465675 NESP48681 1621 aa25.1■■□□□ 1.61
LRP8-207ENST00000465675 RAD54L2Q9Y4B4 1467 aa25.1■■□□□ 1.61
LRP8-207ENST00000465675 CCNB3Q8WWL7 1395 aa25.09■■□□□ 1.61
LRP8-207ENST00000465675 CENPBP07199 599 aaPredicted RBP25.09■■□□□ 1.61
LRP8-207ENST00000465675 P3H3Q8IVL6 736 aa25.09■■□□□ 1.61
LRP8-207ENST00000465675 YTHDC1Q96MU7 727 aaKnown RBP25.08■■□□□ 1.61
LRP8-207ENST00000465675 GTF3C3Q9Y5Q9 886 aa25.08■■□□□ 1.6
LRP8-207ENST00000465675 TIAM1Q13009 1591 aa25.01■■□□□ 1.59
LRP8-207ENST00000465675 CLSPNQ9HAW4 1339 aa24.99■■□□□ 1.59
LRP8-207ENST00000465675 POLA1P09884 1462 aaPredicted RBP24.98■■□□□ 1.59
LRP8-207ENST00000465675 TOPBP1Q92547 1522 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms