RNA–Protein interactions for RNA: ENST00000295628.3

LRRC58-201, Transcript of leucine rich repeat containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC58, Length 7,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58-201ENST00000295628 DCAF8L2P0C7V8 631 aa28.14■■■□□ 2.09
LRRC58-201ENST00000295628 PELP1Q8IZL8 1130 aaKnown RBP27.49■■□□□ 1.99
LRRC58-201ENST00000295628 EHMT2Q96KQ7 1210 aa26.83■■□□□ 1.88
LRRC58-201ENST00000295628 ERICH6Q7L0X2 663 aa26.74■■□□□ 1.87
LRRC58-201ENST00000295628 SUPT5HO00267 1087 aaKnown RBP26.59■■□□□ 1.85
LRRC58-201ENST00000295628 CCER1Q8TC90 406 aaPredicted RBP26.25■■□□□ 1.79
LRRC58-201ENST00000295628 APLP2Q06481 763 aa26.09■■□□□ 1.77
LRRC58-201ENST00000295628 MYT1Q01538 1121 aa26.06■■□□□ 1.76
LRRC58-201ENST00000295628 TTBK1Q5TCY1 1321 aaPredicted RBP25.98■■□□□ 1.75
LRRC58-201ENST00000295628 SHROOM4Q9ULL8 1493 aa25.79■■□□□ 1.72
LRRC58-201ENST00000295628 CENPBP07199 599 aaPredicted RBP25.78■■□□□ 1.72
LRRC58-201ENST00000295628 PCGF6Q9BYE7 350 aa25.63■■□□□ 1.69
LRRC58-201ENST00000295628 FAM9AQ8IZU1 332 aaPredicted RBP25.62■■□□□ 1.69
LRRC58-201ENST00000295628 NEFLP07196 543 aa25.52■■□□□ 1.68
LRRC58-201ENST00000295628 YTHDC1Q96MU7 727 aaKnown RBP25.44■■□□□ 1.66
LRRC58-201ENST00000295628 RANGAP1P46060 587 aaPredicted RBP25.41■■□□□ 1.66
LRRC58-201ENST00000295628 DAXXQ9UER7 740 aaPredicted RBP25.32■■□□□ 1.64
LRRC58-201ENST00000295628 ATP1B4Q9UN42 357 aaPredicted RBP25.32■■□□□ 1.64
LRRC58-201ENST00000295628 ZEB1P37275 1124 aaPredicted RBP25.01■■□□□ 1.59
LRRC58-201ENST00000295628 POLR3GLQ9BT43 218 aa24.76■■□□□ 1.55
LRRC58-201ENST00000295628 ZNF316A6NFI3 1004 aaPredicted RBP24.68■■□□□ 1.54
LRRC58-201ENST00000295628 CNGB1Q14028 1251 aaPredicted RBP24.64■■□□□ 1.54
LRRC58-201ENST00000295628 RTL5Q5HYW3 569 aaPredicted RBP24.57■■□□□ 1.52
LRRC58-201ENST00000295628 UBTFP17480 764 aaKnown RBP24.54■■□□□ 1.52
LRRC58-201ENST00000295628 MYT1LQ9UL68 1186 aa24.51■■□□□ 1.51
LRRC58-201ENST00000295628 CLSPNQ9HAW4 1339 aa24.49■■□□□ 1.51
LRRC58-201ENST00000295628 PPARGC1BQ86YN6 1023 aaKnown RBP24.48■■□□□ 1.51
LRRC58-201ENST00000295628 SLC4A1APQ9BWU0 796 aaKnown RBP24.45■■□□□ 1.5
LRRC58-201ENST00000295628 CHIC1Q5VXU3 224 aa24.44■■□□□ 1.5
LRRC58-201ENST00000295628 TRIM41Q8WV44 630 aa24.39■■□□□ 1.5
LRRC58-201ENST00000295628 ITGAEP38570 1179 aa24.24■■□□□ 1.47
LRRC58-201ENST00000295628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.08■■□□□ 1.45
LRRC58-201ENST00000295628 HNRNPUL2Q1KMD3 747 aaKnown RBP24.08■■□□□ 1.45
LRRC58-201ENST00000295628 BCL11AQ9H165 835 aa24.01■■□□□ 1.43
LRRC58-201ENST00000295628 HRCP23327 699 aa23.91■■□□□ 1.42
LRRC58-201ENST00000295628 ZBTB47Q9UFB7 747 aaPredicted RBP23.86■■□□□ 1.41
LRRC58-201ENST00000295628 SLC24A1O60721 1099 aa23.85■■□□□ 1.41
LRRC58-201ENST00000295628 BCANQ96GW7 911 aa23.83■■□□□ 1.41
LRRC58-201ENST00000295628 TRIM26Q12899 539 aaPredicted RBP23.83■■□□□ 1.41
LRRC58-201ENST00000295628 NISCHQ9Y2I1 1504 aa23.78■■□□□ 1.4
LRRC58-201ENST00000295628 EIF5BO60841 1220 aaKnown RBP23.75■■□□□ 1.39
LRRC58-201ENST00000295628 CDK11AQ9UQ88 783 aaPredicted RBP23.66■■□□□ 1.38
LRRC58-201ENST00000295628 DIEXFQ68CQ4 756 aaKnown RBP23.6■■□□□ 1.37
LRRC58-201ENST00000295628 CANXP27824 592 aaKnown RBP23.57■■□□□ 1.36
LRRC58-201ENST00000295628 ANP32BQ92688 251 aaKnown RBP23.46■■□□□ 1.35
LRRC58-201ENST00000295628 NPM2Q86SE8 214 aaKnown RBP23.44■■□□□ 1.34
LRRC58-201ENST00000295628 GTF3C3Q9Y5Q9 886 aa23.39■■□□□ 1.34
LRRC58-201ENST00000295628 GLIPR1L2Q4G1C9 344 aa23.39■■□□□ 1.33
LRRC58-201ENST00000295628 NEUROD1Q13562 356 aa23.39■■□□□ 1.33
LRRC58-201ENST00000295628 ANP32AP39687 249 aaKnown RBP23.37■■□□□ 1.33
LRRC58-201ENST00000295628 TRIM52Q96A61 297 aa23.35■■□□□ 1.33
LRRC58-201ENST00000295628 FAM50AQ14320 339 aaKnown RBP23.34■■□□□ 1.33
LRRC58-201ENST00000295628 ZNF326Q5BKZ1 582 aaKnown RBP23.32■■□□□ 1.32
LRRC58-201ENST00000295628 HSP90AA1P07900 732 aaKnown RBP23.29■■□□□ 1.32
LRRC58-201ENST00000295628 ANP32CO43423 234 aa23.28■■□□□ 1.32
LRRC58-201ENST00000295628 NEFMP07197 916 aa23.21■■□□□ 1.31
LRRC58-201ENST00000295628 LOC105371045A0A1W2PR82 267 aa23.21■■□□□ 1.31
LRRC58-201ENST00000295628 ARXQ96QS3 562 aa23.2■■□□□ 1.3
LRRC58-201ENST00000295628 NBR1Q14596 966 aa23.03■■□□□ 1.28
LRRC58-201ENST00000295628 CDK11BP21127 795 aaKnown RBP23.01■■□□□ 1.27
LRRC58-201ENST00000295628 UPF2Q9HAU5 1272 aaKnown RBP22.95■■□□□ 1.27
LRRC58-201ENST00000295628 FKBP8Q14318 412 aa22.75■■□□□ 1.23
LRRC58-201ENST00000295628 TULP1O00294 542 aaPredicted RBP22.7■■□□□ 1.22
LRRC58-201ENST00000295628 SALL2Q9Y467 1007 aaPredicted RBP22.69■■□□□ 1.22
LRRC58-201ENST00000295628 PLPPR3Q6T4P5 718 aa22.68■■□□□ 1.22
LRRC58-201ENST00000295628 TNNT2P45379 298 aaPredicted RBP22.65■■□□□ 1.22
LRRC58-201ENST00000295628 ACIN1Q9UKV3 1341 aaKnown RBP22.61■■□□□ 1.21
LRRC58-201ENST00000295628 TRIM44Q96DX7 344 aaPredicted RBP22.59■■□□□ 1.21
LRRC58-201ENST00000295628 A0A0G2JS52 829 aa22.56■■□□□ 1.2
LRRC58-201ENST00000295628 FBLN2P98095 1184 aa22.54■■□□□ 1.2
LRRC58-201ENST00000295628 TPRNQ4KMQ1 711 aa22.54■■□□□ 1.2
LRRC58-201ENST00000295628 FAM9BQ8IZU0 186 aa22.53■■□□□ 1.2
LRRC58-201ENST00000295628 SCAF1Q9H7N4 1312 aaKnown RBP22.5■■□□□ 1.19
LRRC58-201ENST00000295628 ARID3CA6NKF2 412 aa22.5■■□□□ 1.19
LRRC58-201ENST00000295628 HNRNPUQ00839 825 aaKnown RBP eCLIP22.49■■□□□ 1.19
LRRC58-201ENST00000295628 AMER1Q5JTC6 1135 aaPredicted RBP22.49■■□□□ 1.19
LRRC58-201ENST00000295628 CCDC136Q96JN2 1154 aa22.48■■□□□ 1.19
LRRC58-201ENST00000295628 DNTTIP2Q5QJE6 756 aaKnown RBP22.48■■□□□ 1.19
LRRC58-201ENST00000295628 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.47■■□□□ 1.19
LRRC58-201ENST00000295628 STAG3Q9UJ98 1225 aa22.46■■□□□ 1.19
LRRC58-201ENST00000295628 NCLP19338 710 aaKnown RBP22.45■■□□□ 1.18
LRRC58-201ENST00000295628 CHGAP10645 457 aaKnown RBP22.44■■□□□ 1.18
LRRC58-201ENST00000295628 ESF1Q9H501 851 aaKnown RBP22.42■■□□□ 1.18
LRRC58-201ENST00000295628 PTMAP06454 111 aaKnown RBP22.42■■□□□ 1.18
LRRC58-201ENST00000295628 NCBP3Q53F19 620 aaKnown RBP22.4■■□□□ 1.18
LRRC58-201ENST00000295628 ZNF777Q9ULD5 760 aaPredicted RBP22.4■■□□□ 1.18
LRRC58-201ENST00000295628 MYH16Q9H6N6 1097 aa22.39■■□□□ 1.17
LRRC58-201ENST00000295628 ZRSR1Q15695 479 aaKnown RBP22.36■■□□□ 1.17
LRRC58-201ENST00000295628 PLEKHG5O94827 1062 aa22.32■■□□□ 1.16
LRRC58-201ENST00000295628 IRX6P78412 446 aaPredicted RBP22.31■■□□□ 1.16
LRRC58-201ENST00000295628 NAP1L5Q96NT1 182 aaPredicted RBP22.31■■□□□ 1.16
LRRC58-201ENST00000295628 TAOK2Q9UL54 1235 aa22.3■■□□□ 1.16
LRRC58-201ENST00000295628 WDR43Q15061 677 aaKnown RBP eCLIP22.28■■□□□ 1.16
LRRC58-201ENST00000295628 ZBTB7CA1YPR0 619 aa22.28■■□□□ 1.16
LRRC58-201ENST00000295628 P3H3Q8IVL6 736 aa22.27■■□□□ 1.16
LRRC58-201ENST00000295628 BECN1Q14457 450 aa22.27■■□□□ 1.16
LRRC58-201ENST00000295628 TMC1Q8TDI8 760 aa22.27■■□□□ 1.16
LRRC58-201ENST00000295628 RTN4Q9NQC3 1192 aaKnown RBP22.26■■□□□ 1.15
LRRC58-201ENST00000295628 GOLGA6L22H0YM25 854 aa22.26■■□□□ 1.15
LRRC58-201ENST00000295628 DDX10Q13206 875 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms