RNA–Protein interactions for RNA: ENST00000622566.4

NBL1-213, Transcript of NBL1, DAN family BMP antagonist, humanhuman

APPRIS P3 TSL 4 BASIC

Gene NBL1, Length 2,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBL1-213ENST00000622566 NISCHQ9Y2I1 1504 aa38.11■■■■□ 3.69
NBL1-213ENST00000622566 CCDC180Q9P1Z9 1646 aa33.22■■■□□ 2.91
NBL1-213ENST00000622566 ZCCHC6Q5VYS8 1495 aaKnown RBP32.04■■■□□ 2.72
NBL1-213ENST00000622566 DCAF1Q9Y4B6 1507 aa31.52■■■□□ 2.64
NBL1-213ENST00000622566 DCAF8L2P0C7V8 631 aa31.36■■■□□ 2.61
NBL1-213ENST00000622566 ABCC9O60706 1549 aa31.32■■■□□ 2.6
NBL1-213ENST00000622566 MYO15BQ96JP2 1530 aa31.13■■■□□ 2.57
NBL1-213ENST00000622566 SHROOM4Q9ULL8 1493 aa31.08■■■□□ 2.57
NBL1-213ENST00000622566 NACADO15069 1562 aa30.9■■■□□ 2.54
NBL1-213ENST00000622566 RB1CC1Q8TDY2 1594 aa30.62■■■□□ 2.49
NBL1-213ENST00000622566 SCRIBQ14160 1630 aa30.54■■■□□ 2.48
NBL1-213ENST00000622566 UNC13AQ9UPW8 1703 aa30.08■■■□□ 2.41
NBL1-213ENST00000622566 SUPT5HO00267 1087 aaKnown RBP29.92■■■□□ 2.38
NBL1-213ENST00000622566 BICRAQ9NZM4 1560 aa29.75■■■□□ 2.35
NBL1-213ENST00000622566 CECR2Q9BXF3 1484 aa29.62■■■□□ 2.33
NBL1-213ENST00000622566 RSF1Q96T23 1441 aaPredicted RBP29.59■■■□□ 2.33
NBL1-213ENST00000622566 PABPN1Q86U42 306 aaKnown RBP eCLIP29.53■■■□□ 2.32
NBL1-213ENST00000622566 MROH2BQ7Z745 1585 aa29.45■■■□□ 2.31
NBL1-213ENST00000622566 BAZ1AQ9NRL2 1556 aaPredicted RBP29.41■■■□□ 2.3
NBL1-213ENST00000622566 SMARCA4P51532 1647 aa29.3■■■□□ 2.28
NBL1-213ENST00000622566 WIZO95785 1651 aa29.23■■■□□ 2.27
NBL1-213ENST00000622566 PEG3Q9GZU2 1588 aa28.95■■■□□ 2.22
NBL1-213ENST00000622566 TOP2AP11388 1531 aaKnown RBP28.91■■■□□ 2.22
NBL1-213ENST00000622566 EIF4G1Q04637 1599 aaKnown RBP28.81■■■□□ 2.2
NBL1-213ENST00000622566 ATAD2BQ9ULI0 1458 aa28.78■■■□□ 2.2
NBL1-213ENST00000622566 SMARCA2P51531 1590 aa28.76■■■□□ 2.19
NBL1-213ENST00000622566 CHIC1Q5VXU3 224 aa28.71■■■□□ 2.19
NBL1-213ENST00000622566 CCDC88BA6NC98 1476 aa28.61■■■□□ 2.17
NBL1-213ENST00000622566 BAZ1BQ9UIG0 1483 aaKnown RBP28.6■■■□□ 2.17
NBL1-213ENST00000622566 NCAPD3P42695 1498 aa28.53■■■□□ 2.16
NBL1-213ENST00000622566 HMGXB3Q12766 1538 aa28.5■■■□□ 2.15
NBL1-213ENST00000622566 CC2D2AQ9P2K1 1620 aa28.37■■■□□ 2.13
NBL1-213ENST00000622566 TRIM41Q8WV44 630 aa28.12■■■□□ 2.09
NBL1-213ENST00000622566 ABCC8Q09428 1581 aa28.04■■■□□ 2.08
NBL1-213ENST00000622566 CFTRP13569 1480 aa27.91■■■□□ 2.06
NBL1-213ENST00000622566 LOC105371045A0A1W2PR82 267 aa27.87■■■□□ 2.05
NBL1-213ENST00000622566 WRNQ14191 1432 aaPredicted RBP eCLIP27.82■■■□□ 2.04
NBL1-213ENST00000622566 PRDM2Q13029 1718 aa27.82■■■□□ 2.04
NBL1-213ENST00000622566 CADPSQ9ULU8 1353 aa27.78■■■□□ 2.04
NBL1-213ENST00000622566 SYNJ1O43426 1573 aa27.74■■■□□ 2.03
NBL1-213ENST00000622566 DNAJC5BQ9UF47 199 aa27.65■■■□□ 2.02
NBL1-213ENST00000622566 TOP2BQ02880 1626 aa27.62■■■□□ 2.01
NBL1-213ENST00000622566 FAM9AQ8IZU1 332 aaPredicted RBP27.61■■■□□ 2.01
NBL1-213ENST00000622566 BIVM-ERCC5R4GMW8 1640 aa27.61■■■□□ 2.01
NBL1-213ENST00000622566 LAMC3Q9Y6N6 1575 aa27.54■■■□□ 2
NBL1-213ENST00000622566 NESP48681 1621 aa27.54■■■□□ 2
NBL1-213ENST00000622566 CUX1P39880 1505 aa27.54■■■□□ 2
NBL1-213ENST00000622566 SOGA1O94964 1423 aa27.51■■□□□ 1.99
NBL1-213ENST00000622566 FANCD2Q9BXW9 1451 aa27.48■■□□□ 1.99
NBL1-213ENST00000622566 EEA1Q15075 1411 aa27.45■■□□□ 1.98
NBL1-213ENST00000622566 PCGF6Q9BYE7 350 aa27.43■■□□□ 1.98
NBL1-213ENST00000622566 RUSC2Q8N2Y8 1516 aa27.42■■□□□ 1.98
NBL1-213ENST00000622566 PDS5BQ9NTI5 1447 aa27.29■■□□□ 1.96
NBL1-213ENST00000622566 CEP164Q9UPV0 1460 aa27.29■■□□□ 1.96
NBL1-213ENST00000622566 CSRNP3Q8WYN3 585 aa27.28■■□□□ 1.96
NBL1-213ENST00000622566 DNMBPQ6XZF7 1577 aa27.26■■□□□ 1.95
NBL1-213ENST00000622566 EHMT2Q96KQ7 1210 aa27.26■■□□□ 1.95
NBL1-213ENST00000622566 KIF21AQ7Z4S6 1674 aa27.23■■□□□ 1.95
NBL1-213ENST00000622566 FGD5Q6ZNL6 1462 aa27.21■■□□□ 1.95
NBL1-213ENST00000622566 TOPBP1Q92547 1522 aa27.2■■□□□ 1.95
NBL1-213ENST00000622566 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
NBL1-213ENST00000622566 KIF21BO75037 1637 aa27.13■■□□□ 1.93
NBL1-213ENST00000622566 HRCP23327 699 aa27.12■■□□□ 1.93
NBL1-213ENST00000622566 KIF27Q86VH2 1401 aa27.1■■□□□ 1.93
NBL1-213ENST00000622566 POLA1P09884 1462 aaPredicted RBP27.08■■□□□ 1.93
NBL1-213ENST00000622566 GOLGA3Q08378 1498 aa27.07■■□□□ 1.92
NBL1-213ENST00000622566 CUX2O14529 1486 aa27.03■■□□□ 1.92
NBL1-213ENST00000622566 TNIKQ9UKE5 1360 aa27.01■■□□□ 1.91
NBL1-213ENST00000622566 TRIM26Q12899 539 aaPredicted RBP26.99■■□□□ 1.91
NBL1-213ENST00000622566 RAD54L2Q9Y4B4 1467 aa26.99■■□□□ 1.91
NBL1-213ENST00000622566 ABCA10Q8WWZ4 1543 aa26.98■■□□□ 1.91
NBL1-213ENST00000622566 PRXQ9BXM0 1461 aa26.97■■□□□ 1.91
NBL1-213ENST00000622566 MRC2Q9UBG0 1479 aa26.96■■□□□ 1.91
NBL1-213ENST00000622566 RAPGEF2Q9Y4G8 1499 aa26.95■■□□□ 1.9
NBL1-213ENST00000622566 WDR97A6NE52 1622 aa26.93■■□□□ 1.9
NBL1-213ENST00000622566 ERICH3Q5RHP9 1530 aa26.93■■□□□ 1.9
NBL1-213ENST00000622566 UBTFP17480 764 aaKnown RBP26.9■■□□□ 1.9
NBL1-213ENST00000622566 IGF1RP08069 1367 aa26.88■■□□□ 1.89
NBL1-213ENST00000622566 CEP162Q5TB80 1403 aa26.86■■□□□ 1.89
NBL1-213ENST00000622566 WDR62O43379 1518 aa26.84■■□□□ 1.89
NBL1-213ENST00000622566 TARBP1Q13395 1621 aaKnown RBP26.82■■□□□ 1.88
NBL1-213ENST00000622566 ERCC6Q03468 1493 aa26.81■■□□□ 1.88
NBL1-213ENST00000622566 ABCA5Q8WWZ7 1642 aa26.78■■□□□ 1.88
NBL1-213ENST00000622566 THOC2Q8NI27 1593 aaKnown RBP26.77■■□□□ 1.88
NBL1-213ENST00000622566 CARMIL1Q5VZK9 1371 aa26.72■■□□□ 1.87
NBL1-213ENST00000622566 TDRD9Q8NDG6 1382 aaKnown RBP26.69■■□□□ 1.86
NBL1-213ENST00000622566 CUL7Q14999 1698 aa26.68■■□□□ 1.86
NBL1-213ENST00000622566 GAPVD1Q14C86 1478 aa26.68■■□□□ 1.86
NBL1-213ENST00000622566 PPARGC1BQ86YN6 1023 aaKnown RBP26.64■■□□□ 1.86
NBL1-213ENST00000622566 CLIP1P30622 1438 aa26.64■■□□□ 1.85
NBL1-213ENST00000622566 IFT140Q96RY7 1462 aa26.64■■□□□ 1.85
NBL1-213ENST00000622566 PBRM1Q86U86 1689 aa26.56■■□□□ 1.84
NBL1-213ENST00000622566 AQRO60306 1485 aaKnown RBP eCLIP26.53■■□□□ 1.84
NBL1-213ENST00000622566 ZNF608Q9ULD9 1512 aaPredicted RBP26.51■■□□□ 1.83
NBL1-213ENST00000622566 GRIN2BQ13224 1484 aa26.46■■□□□ 1.83
NBL1-213ENST00000622566 RANGAP1P46060 587 aaPredicted RBP26.44■■□□□ 1.82
NBL1-213ENST00000622566 EIF4G3O43432 1585 aaKnown RBP26.43■■□□□ 1.82
NBL1-213ENST00000622566 VPS8Q8N3P4 1428 aa26.42■■□□□ 1.82
NBL1-213ENST00000622566 ADAMTS12P58397 1594 aa26.41■■□□□ 1.82
NBL1-213ENST00000622566 CTTNBP2Q8WZ74 1663 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms