RNA–Protein interactions for RNA: ENST00000249373.7

SMO-201, Transcript of smoothened, frizzled class receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMO, Length 3,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMO-201ENST00000249373 NISCHQ9Y2I1 1504 aa31.5■■■□□ 2.63
SMO-201ENST00000249373 DCAF8L2P0C7V8 631 aa30.27■■■□□ 2.44
SMO-201ENST00000249373 SHROOM4Q9ULL8 1493 aa29.84■■■□□ 2.37
SMO-201ENST00000249373 SUPT5HO00267 1087 aaKnown RBP29.65■■■□□ 2.34
SMO-201ENST00000249373 EHMT2Q96KQ7 1210 aa28.58■■■□□ 2.17
SMO-201ENST00000249373 FAM9AQ8IZU1 332 aaPredicted RBP27.88■■■□□ 2.05
SMO-201ENST00000249373 PCGF6Q9BYE7 350 aa27.85■■■□□ 2.05
SMO-201ENST00000249373 TTBK1Q5TCY1 1321 aaPredicted RBP27.48■■□□□ 1.99
SMO-201ENST00000249373 LOC105371045A0A1W2PR82 267 aa27.44■■□□□ 1.98
SMO-201ENST00000249373 CHIC1Q5VXU3 224 aa27.3■■□□□ 1.96
SMO-201ENST00000249373 PPARGC1BQ86YN6 1023 aaKnown RBP27.3■■□□□ 1.96
SMO-201ENST00000249373 HRCP23327 699 aa27.1■■□□□ 1.93
SMO-201ENST00000249373 TRIM41Q8WV44 630 aa27.01■■□□□ 1.91
SMO-201ENST00000249373 RANGAP1P46060 587 aaPredicted RBP26.9■■□□□ 1.9
SMO-201ENST00000249373 MYO15BQ96JP2 1530 aa26.64■■□□□ 1.86
SMO-201ENST00000249373 ABCC9O60706 1549 aa26.44■■□□□ 1.82
SMO-201ENST00000249373 TRIM26Q12899 539 aaPredicted RBP26.41■■□□□ 1.82
SMO-201ENST00000249373 ZCCHC6Q5VYS8 1495 aaKnown RBP26.3■■□□□ 1.8
SMO-201ENST00000249373 UBTFP17480 764 aaKnown RBP26.27■■□□□ 1.8
SMO-201ENST00000249373 CCER1Q8TC90 406 aaPredicted RBP26.26■■□□□ 1.79
SMO-201ENST00000249373 PABPN1Q86U42 306 aaKnown RBP eCLIP26.22■■□□□ 1.79
SMO-201ENST00000249373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.11■■□□□ 1.77
SMO-201ENST00000249373 ZEB1P37275 1124 aaPredicted RBP25.95■■□□□ 1.74
SMO-201ENST00000249373 APLP2Q06481 763 aa25.92■■□□□ 1.74
SMO-201ENST00000249373 YTHDC1Q96MU7 727 aaKnown RBP25.9■■□□□ 1.74
SMO-201ENST00000249373 SCRIBQ14160 1630 aa25.88■■□□□ 1.73
SMO-201ENST00000249373 HNRNPUL2Q1KMD3 747 aaKnown RBP25.84■■□□□ 1.73
SMO-201ENST00000249373 ATP1B4Q9UN42 357 aaPredicted RBP25.8■■□□□ 1.72
SMO-201ENST00000249373 ITGAEP38570 1179 aa25.69■■□□□ 1.7
SMO-201ENST00000249373 DCAF1Q9Y4B6 1507 aa25.59■■□□□ 1.69
SMO-201ENST00000249373 CCDC180Q9P1Z9 1646 aa25.49■■□□□ 1.67
SMO-201ENST00000249373 CENPBP07199 599 aaPredicted RBP25.46■■□□□ 1.67
SMO-201ENST00000249373 RSF1Q96T23 1441 aaPredicted RBP25.45■■□□□ 1.66
SMO-201ENST00000249373 DIEXFQ68CQ4 756 aaKnown RBP25.4■■□□□ 1.66
SMO-201ENST00000249373 SCAF1Q9H7N4 1312 aaKnown RBP25.39■■□□□ 1.66
SMO-201ENST00000249373 CECR2Q9BXF3 1484 aa25.32■■□□□ 1.64
SMO-201ENST00000249373 GTF3C3Q9Y5Q9 886 aa25.29■■□□□ 1.64
SMO-201ENST00000249373 PELP1Q8IZL8 1130 aaKnown RBP25.19■■□□□ 1.62
SMO-201ENST00000249373 NEUROD1Q13562 356 aa25.18■■□□□ 1.62
SMO-201ENST00000249373 CSRNP3Q8WYN3 585 aa25.14■■□□□ 1.62
SMO-201ENST00000249373 ACIN1Q9UKV3 1341 aaKnown RBP25.07■■□□□ 1.6
SMO-201ENST00000249373 P3H3Q8IVL6 736 aa25.04■■□□□ 1.6
SMO-201ENST00000249373 RB1CC1Q8TDY2 1594 aa25.03■■□□□ 1.6
SMO-201ENST00000249373 CNGB1Q14028 1251 aaPredicted RBP24.99■■□□□ 1.59
SMO-201ENST00000249373 MROH2BQ7Z745 1585 aa24.87■■□□□ 1.57
SMO-201ENST00000249373 ARID3CA6NKF2 412 aa24.84■■□□□ 1.57
SMO-201ENST00000249373 FAM50AQ14320 339 aaKnown RBP24.82■■□□□ 1.56
SMO-201ENST00000249373 ZNF316A6NFI3 1004 aaPredicted RBP24.81■■□□□ 1.56
SMO-201ENST00000249373 SOGA1O94964 1423 aa24.75■■□□□ 1.55
SMO-201ENST00000249373 ABCC8Q09428 1581 aa24.7■■□□□ 1.54
SMO-201ENST00000249373 MIER1Q8N108 512 aa24.68■■□□□ 1.54
SMO-201ENST00000249373 CEP162Q5TB80 1403 aa24.6■■□□□ 1.53
SMO-201ENST00000249373 CCDC88BA6NC98 1476 aa24.6■■□□□ 1.53
SMO-201ENST00000249373 WIZO95785 1651 aa24.6■■□□□ 1.53
SMO-201ENST00000249373 BCANQ96GW7 911 aa24.59■■□□□ 1.53
SMO-201ENST00000249373 POLR3GLQ9BT43 218 aa24.58■■□□□ 1.53
SMO-201ENST00000249373 HIRIP3Q9BW71 556 aaPredicted RBP24.58■■□□□ 1.53
SMO-201ENST00000249373 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
SMO-201ENST00000249373 NACADO15069 1562 aa24.39■■□□□ 1.49
SMO-201ENST00000249373 CLIP1P30622 1438 aa24.38■■□□□ 1.49
SMO-201ENST00000249373 WRNQ14191 1432 aaPredicted RBP eCLIP24.36■■□□□ 1.49
SMO-201ENST00000249373 TRIM52Q96A61 297 aa24.28■■□□□ 1.48
SMO-201ENST00000249373 FBLN2P98095 1184 aa24.25■■□□□ 1.47
SMO-201ENST00000249373 BAZ1AQ9NRL2 1556 aaPredicted RBP24.24■■□□□ 1.47
SMO-201ENST00000249373 KANK4Q5T7N3 995 aaPredicted RBP24.23■■□□□ 1.47
SMO-201ENST00000249373 DDX10Q13206 875 aaKnown RBP24.23■■□□□ 1.47
SMO-201ENST00000249373 CHIC2Q9UKJ5 165 aa24.2■■□□□ 1.46
SMO-201ENST00000249373 NEFLP07196 543 aa24.19■■□□□ 1.46
SMO-201ENST00000249373 TNIKQ9UKE5 1360 aa24.19■■□□□ 1.46
SMO-201ENST00000249373 ZNF326Q5BKZ1 582 aaKnown RBP24.19■■□□□ 1.46
SMO-201ENST00000249373 SENP3-EIF4A1A0A087X0R7 540 aa24.18■■□□□ 1.46
SMO-201ENST00000249373 GOLGA3Q08378 1498 aa24.13■■□□□ 1.45
SMO-201ENST00000249373 BAZ1BQ9UIG0 1483 aaKnown RBP24.11■■□□□ 1.45
SMO-201ENST00000249373 SIN3AQ96ST3 1273 aa24.1■■□□□ 1.45
SMO-201ENST00000249373 ZNF777Q9ULD5 760 aaPredicted RBP23.98■■□□□ 1.43
SMO-201ENST00000249373 FKBP8Q14318 412 aa23.97■■□□□ 1.43
SMO-201ENST00000249373 MYT1Q01538 1121 aa23.94■■□□□ 1.42
SMO-201ENST00000249373 ERICH6Q7L0X2 663 aa23.93■■□□□ 1.42
SMO-201ENST00000249373 RAPGEF2Q9Y4G8 1499 aa23.91■■□□□ 1.42
SMO-201ENST00000249373 RRP7BPQ9NSQ0 103 aa23.91■■□□□ 1.42
SMO-201ENST00000249373 KCNH8Q96L42 1107 aa23.89■■□□□ 1.42
SMO-201ENST00000249373 CEP164Q9UPV0 1460 aa23.89■■□□□ 1.42
SMO-201ENST00000249373 IRX6P78412 446 aaPredicted RBP23.89■■□□□ 1.42
SMO-201ENST00000249373 MYT1LQ9UL68 1186 aa23.86■■□□□ 1.41
SMO-201ENST00000249373 ANP32CO43423 234 aa23.83■■□□□ 1.41
SMO-201ENST00000249373 TOP2AP11388 1531 aaKnown RBP23.83■■□□□ 1.41
SMO-201ENST00000249373 EEA1Q15075 1411 aa23.82■■□□□ 1.4
SMO-201ENST00000249373 SUPT16HQ9Y5B9 1047 aaKnown RBP23.8■■□□□ 1.4
SMO-201ENST00000249373 SMARCA4P51532 1647 aa23.78■■□□□ 1.4
SMO-201ENST00000249373 VPS8Q8N3P4 1428 aa23.73■■□□□ 1.39
SMO-201ENST00000249373 SMARCA2P51531 1590 aa23.72■■□□□ 1.39
SMO-201ENST00000249373 KIF27Q86VH2 1401 aa23.71■■□□□ 1.39
SMO-201ENST00000249373 CUX2O14529 1486 aa23.7■■□□□ 1.38
SMO-201ENST00000249373 FAM9BQ8IZU0 186 aa23.69■■□□□ 1.38
SMO-201ENST00000249373 SALL2Q9Y467 1007 aaPredicted RBP23.68■■□□□ 1.38
SMO-201ENST00000249373 ATAD2BQ9ULI0 1458 aa23.68■■□□□ 1.38
SMO-201ENST00000249373 TONSLQ96HA7 1378 aa23.67■■□□□ 1.38
SMO-201ENST00000249373 HNRNPUQ00839 825 aaKnown RBP eCLIP23.67■■□□□ 1.38
SMO-201ENST00000249373 FOXD1Q16676 465 aa23.67■■□□□ 1.38
SMO-201ENST00000249373 MTUS2Q5JR59 1369 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms