RNA–Protein interactions for RNA: ENST00000540557.1

AL138752.2-201, humanhuman

APPRIS P1 TSL 5 BASIC

Gene AL138752.2, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL138752.2-201ENST00000540557 NISCHQ9Y2I1 1504 aa34.24■■■■□ 3.07
AL138752.2-201ENST00000540557 PELP1Q8IZL8 1130 aaKnown RBP30.71■■■□□ 2.51
AL138752.2-201ENST00000540557 MYT1Q01538 1121 aa29.96■■■□□ 2.39
AL138752.2-201ENST00000540557 SHROOM4Q9ULL8 1493 aa29.6■■■□□ 2.33
AL138752.2-201ENST00000540557 HRCP23327 699 aa29.47■■■□□ 2.31
AL138752.2-201ENST00000540557 SUPT5HO00267 1087 aaKnown RBP29.31■■■□□ 2.28
AL138752.2-201ENST00000540557 ZCCHC6Q5VYS8 1495 aaKnown RBP28.95■■■□□ 2.23
AL138752.2-201ENST00000540557 CCDC180Q9P1Z9 1646 aa28.9■■■□□ 2.22
AL138752.2-201ENST00000540557 PPARGC1BQ86YN6 1023 aaKnown RBP28.88■■■□□ 2.21
AL138752.2-201ENST00000540557 MYO15BQ96JP2 1530 aa28.87■■■□□ 2.21
AL138752.2-201ENST00000540557 SCAF1Q9H7N4 1312 aaKnown RBP28.84■■■□□ 2.21
AL138752.2-201ENST00000540557 DCAF8L2P0C7V8 631 aa28.72■■■□□ 2.19
AL138752.2-201ENST00000540557 CHIC1Q5VXU3 224 aa28.69■■■□□ 2.18
AL138752.2-201ENST00000540557 PCGF6Q9BYE7 350 aa28.62■■■□□ 2.17
AL138752.2-201ENST00000540557 TTBK1Q5TCY1 1321 aaPredicted RBP28.62■■■□□ 2.17
AL138752.2-201ENST00000540557 PRKCSHP14314 528 aaPredicted RBP28.25■■■□□ 2.11
AL138752.2-201ENST00000540557 DCAF1Q9Y4B6 1507 aa28.05■■■□□ 2.08
AL138752.2-201ENST00000540557 LOC105371045A0A1W2PR82 267 aa28.03■■■□□ 2.08
AL138752.2-201ENST00000540557 BCL11AQ9H165 835 aa28.02■■■□□ 2.08
AL138752.2-201ENST00000540557 FAM9AQ8IZU1 332 aaPredicted RBP27.79■■■□□ 2.04
AL138752.2-201ENST00000540557 TRIM26Q12899 539 aaPredicted RBP27.74■■■□□ 2.03
AL138752.2-201ENST00000540557 ACIN1Q9UKV3 1341 aaKnown RBP27.55■■■□□ 2
AL138752.2-201ENST00000540557 NEUROD1Q13562 356 aa27.45■■□□□ 1.98
AL138752.2-201ENST00000540557 GTF3C3Q9Y5Q9 886 aa27.44■■□□□ 1.98
AL138752.2-201ENST00000540557 CENPBP07199 599 aaPredicted RBP27.37■■□□□ 1.97
AL138752.2-201ENST00000540557 ERICH6Q7L0X2 663 aa27.34■■□□□ 1.97
AL138752.2-201ENST00000540557 ZEB1P37275 1124 aaPredicted RBP27.33■■□□□ 1.97
AL138752.2-201ENST00000540557 ABCC9O60706 1549 aa27.32■■□□□ 1.96
AL138752.2-201ENST00000540557 APLP2Q06481 763 aa27.32■■□□□ 1.96
AL138752.2-201ENST00000540557 SCRIBQ14160 1630 aa27.31■■□□□ 1.96
AL138752.2-201ENST00000540557 RSF1Q96T23 1441 aaPredicted RBP27.21■■□□□ 1.95
AL138752.2-201ENST00000540557 TRIM41Q8WV44 630 aa27.1■■□□□ 1.93
AL138752.2-201ENST00000540557 EHMT2Q96KQ7 1210 aa27.04■■□□□ 1.92
AL138752.2-201ENST00000540557 RB1CC1Q8TDY2 1594 aa26.92■■□□□ 1.9
AL138752.2-201ENST00000540557 ANP32EQ9BTT0 268 aa26.88■■□□□ 1.89
AL138752.2-201ENST00000540557 CECR2Q9BXF3 1484 aa26.78■■□□□ 1.88
AL138752.2-201ENST00000540557 NACADO15069 1562 aa26.76■■□□□ 1.87
AL138752.2-201ENST00000540557 CSRNP3Q8WYN3 585 aa26.72■■□□□ 1.87
AL138752.2-201ENST00000540557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.68■■□□□ 1.86
AL138752.2-201ENST00000540557 MROH2BQ7Z745 1585 aa26.67■■□□□ 1.86
AL138752.2-201ENST00000540557 CCER1Q8TC90 406 aaPredicted RBP26.57■■□□□ 1.84
AL138752.2-201ENST00000540557 WIZO95785 1651 aa26.53■■□□□ 1.84
AL138752.2-201ENST00000540557 DIEXFQ68CQ4 756 aaKnown RBP26.42■■□□□ 1.82
AL138752.2-201ENST00000540557 BAZ1AQ9NRL2 1556 aaPredicted RBP26.29■■□□□ 1.8
AL138752.2-201ENST00000540557 SLC24A1O60721 1099 aa26.2■■□□□ 1.78
AL138752.2-201ENST00000540557 ANO8Q9HCE9 1232 aaPredicted RBP26.14■■□□□ 1.77
AL138752.2-201ENST00000540557 EIF4G1Q04637 1599 aaKnown RBP26.1■■□□□ 1.77
AL138752.2-201ENST00000540557 TSHZ2Q9NRE2 1034 aa26.08■■□□□ 1.77
AL138752.2-201ENST00000540557 TOP2AP11388 1531 aaKnown RBP26.05■■□□□ 1.76
AL138752.2-201ENST00000540557 ABCC8Q09428 1581 aa26.05■■□□□ 1.76
AL138752.2-201ENST00000540557 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
AL138752.2-201ENST00000540557 WRNQ14191 1432 aaPredicted RBP eCLIP26.03■■□□□ 1.76
AL138752.2-201ENST00000540557 SMARCA4P51532 1647 aa26.02■■□□□ 1.76
AL138752.2-201ENST00000540557 YTHDC1Q96MU7 727 aaKnown RBP26.01■■□□□ 1.75
AL138752.2-201ENST00000540557 CEP162Q5TB80 1403 aa26■■□□□ 1.75
AL138752.2-201ENST00000540557 ZNF316A6NFI3 1004 aaPredicted RBP25.99■■□□□ 1.75
AL138752.2-201ENST00000540557 SMARCA2P51531 1590 aa25.93■■□□□ 1.74
AL138752.2-201ENST00000540557 UNC13AQ9UPW8 1703 aa25.88■■□□□ 1.73
AL138752.2-201ENST00000540557 PABPN1Q86U42 306 aaKnown RBP eCLIP25.88■■□□□ 1.73
AL138752.2-201ENST00000540557 SOGA1O94964 1423 aa25.86■■□□□ 1.73
AL138752.2-201ENST00000540557 TNIKQ9UKE5 1360 aa25.82■■□□□ 1.72
AL138752.2-201ENST00000540557 MIER1Q8N108 512 aa25.82■■□□□ 1.72
AL138752.2-201ENST00000540557 UBTFP17480 764 aaKnown RBP25.78■■□□□ 1.72
AL138752.2-201ENST00000540557 UBE2Q2Q8WVN8 375 aa25.78■■□□□ 1.72
AL138752.2-201ENST00000540557 RUSC2Q8N2Y8 1516 aa25.75■■□□□ 1.71
AL138752.2-201ENST00000540557 EIF5BO60841 1220 aaKnown RBP25.74■■□□□ 1.71
AL138752.2-201ENST00000540557 SUPT16HQ9Y5B9 1047 aaKnown RBP25.72■■□□□ 1.71
AL138752.2-201ENST00000540557 HNRNPUL2Q1KMD3 747 aaKnown RBP25.69■■□□□ 1.7
AL138752.2-201ENST00000540557 EEA1Q15075 1411 aa25.65■■□□□ 1.7
AL138752.2-201ENST00000540557 SALL2Q9Y467 1007 aaPredicted RBP25.63■■□□□ 1.69
AL138752.2-201ENST00000540557 BICRAQ9NZM4 1560 aa25.59■■□□□ 1.69
AL138752.2-201ENST00000540557 GOLGA3Q08378 1498 aa25.56■■□□□ 1.68
AL138752.2-201ENST00000540557 CCDC136Q96JN2 1154 aa25.54■■□□□ 1.68
AL138752.2-201ENST00000540557 DAXXQ9UER7 740 aaPredicted RBP25.48■■□□□ 1.67
AL138752.2-201ENST00000540557 CLSPNQ9HAW4 1339 aa25.43■■□□□ 1.66
AL138752.2-201ENST00000540557 PEG3Q9GZU2 1588 aa25.43■■□□□ 1.66
AL138752.2-201ENST00000540557 PLEKHG5O94827 1062 aa25.42■■□□□ 1.66
AL138752.2-201ENST00000540557 SYNJ1O43426 1573 aa25.39■■□□□ 1.66
AL138752.2-201ENST00000540557 ATAD2BQ9ULI0 1458 aa25.36■■□□□ 1.65
AL138752.2-201ENST00000540557 CEP164Q9UPV0 1460 aa25.36■■□□□ 1.65
AL138752.2-201ENST00000540557 CLIP1P30622 1438 aa25.36■■□□□ 1.65
AL138752.2-201ENST00000540557 RANGAP1P46060 587 aaPredicted RBP25.34■■□□□ 1.65
AL138752.2-201ENST00000540557 BAZ1BQ9UIG0 1483 aaKnown RBP25.33■■□□□ 1.65
AL138752.2-201ENST00000540557 MSH5O43196 834 aa25.3■■□□□ 1.64
AL138752.2-201ENST00000540557 VPS8Q8N3P4 1428 aa25.29■■□□□ 1.64
AL138752.2-201ENST00000540557 KIF21BO75037 1637 aa25.27■■□□□ 1.64
AL138752.2-201ENST00000540557 RBM19Q9Y4C8 960 aaKnown RBP25.27■■□□□ 1.64
AL138752.2-201ENST00000540557 DEKP35659 375 aaKnown RBP25.25■■□□□ 1.63
AL138752.2-201ENST00000540557 PKNOX2Q96KN3 472 aa25.21■■□□□ 1.63
AL138752.2-201ENST00000540557 RAPGEF2Q9Y4G8 1499 aa25.2■■□□□ 1.62
AL138752.2-201ENST00000540557 ERICH6BQ5W0A0 696 aa25.17■■□□□ 1.62
AL138752.2-201ENST00000540557 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.14■■□□□ 1.61
AL138752.2-201ENST00000540557 DHX57Q6P158 1386 aaKnown RBP25.14■■□□□ 1.61
AL138752.2-201ENST00000540557 MYT1LQ9UL68 1186 aa25.08■■□□□ 1.61
AL138752.2-201ENST00000540557 TOP2BQ02880 1626 aa25.03■■□□□ 1.6
AL138752.2-201ENST00000540557 PODXL2Q9NZ53 605 aa25.03■■□□□ 1.6
AL138752.2-201ENST00000540557 BCANQ96GW7 911 aa24.96■■□□□ 1.59
AL138752.2-201ENST00000540557 KANK4Q5T7N3 995 aaPredicted RBP24.95■■□□□ 1.58
AL138752.2-201ENST00000540557 KCNH8Q96L42 1107 aa24.93■■□□□ 1.58
AL138752.2-201ENST00000540557 BIVM-ERCC5R4GMW8 1640 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms