RNA–Protein interactions for RNA: ENST00000557943.5

ETFA-203, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ETFA, Length 2,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-203ENST00000557943 NISCHQ9Y2I1 1504 aa36.28■■■■□ 3.4
ETFA-203ENST00000557943 CCDC180Q9P1Z9 1646 aa31.11■■■□□ 2.57
ETFA-203ENST00000557943 ZCCHC6Q5VYS8 1495 aaKnown RBP30.63■■■□□ 2.49
ETFA-203ENST00000557943 SHROOM4Q9ULL8 1493 aa30.55■■■□□ 2.48
ETFA-203ENST00000557943 DCAF8L2P0C7V8 631 aa30.05■■■□□ 2.4
ETFA-203ENST00000557943 DCAF1Q9Y4B6 1507 aa29.8■■■□□ 2.36
ETFA-203ENST00000557943 SUPT5HO00267 1087 aaKnown RBP29.74■■■□□ 2.35
ETFA-203ENST00000557943 MYO15BQ96JP2 1530 aa29.09■■■□□ 2.25
ETFA-203ENST00000557943 ABCC9O60706 1549 aa29.06■■■□□ 2.24
ETFA-203ENST00000557943 SCRIBQ14160 1630 aa29.04■■■□□ 2.24
ETFA-203ENST00000557943 NACADO15069 1562 aa28.81■■■□□ 2.2
ETFA-203ENST00000557943 CHIC1Q5VXU3 224 aa28.76■■■□□ 2.19
ETFA-203ENST00000557943 RSF1Q96T23 1441 aaPredicted RBP28.53■■■□□ 2.16
ETFA-203ENST00000557943 RB1CC1Q8TDY2 1594 aa28.42■■■□□ 2.14
ETFA-203ENST00000557943 CECR2Q9BXF3 1484 aa28.3■■■□□ 2.12
ETFA-203ENST00000557943 MROH2BQ7Z745 1585 aa28.18■■■□□ 2.1
ETFA-203ENST00000557943 UNC13AQ9UPW8 1703 aa28.04■■■□□ 2.08
ETFA-203ENST00000557943 WIZO95785 1651 aa28.03■■■□□ 2.08
ETFA-203ENST00000557943 BAZ1AQ9NRL2 1556 aaPredicted RBP27.9■■■□□ 2.06
ETFA-203ENST00000557943 LOC105371045A0A1W2PR82 267 aa27.85■■■□□ 2.05
ETFA-203ENST00000557943 SMARCA4P51532 1647 aa27.74■■■□□ 2.03
ETFA-203ENST00000557943 TRIM41Q8WV44 630 aa27.74■■■□□ 2.03
ETFA-203ENST00000557943 BICRAQ9NZM4 1560 aa27.68■■■□□ 2.02
ETFA-203ENST00000557943 PABPN1Q86U42 306 aaKnown RBP eCLIP27.66■■■□□ 2.02
ETFA-203ENST00000557943 TOP2AP11388 1531 aaKnown RBP27.6■■■□□ 2.01
ETFA-203ENST00000557943 EIF4G1Q04637 1599 aaKnown RBP27.53■■■□□ 2
ETFA-203ENST00000557943 FAM9AQ8IZU1 332 aaPredicted RBP27.49■■□□□ 1.99
ETFA-203ENST00000557943 SMARCA2P51531 1590 aa27.43■■□□□ 1.98
ETFA-203ENST00000557943 CCDC88BA6NC98 1476 aa27.43■■□□□ 1.98
ETFA-203ENST00000557943 PCGF6Q9BYE7 350 aa27.4■■□□□ 1.98
ETFA-203ENST00000557943 EHMT2Q96KQ7 1210 aa27.25■■□□□ 1.95
ETFA-203ENST00000557943 ABCC8Q09428 1581 aa27.24■■□□□ 1.95
ETFA-203ENST00000557943 PEG3Q9GZU2 1588 aa27.24■■□□□ 1.95
ETFA-203ENST00000557943 HRCP23327 699 aa27.15■■□□□ 1.94
ETFA-203ENST00000557943 ATAD2BQ9ULI0 1458 aa27.09■■□□□ 1.93
ETFA-203ENST00000557943 BAZ1BQ9UIG0 1483 aaKnown RBP27■■□□□ 1.91
ETFA-203ENST00000557943 TRIM26Q12899 539 aaPredicted RBP27■■□□□ 1.91
ETFA-203ENST00000557943 SOGA1O94964 1423 aa26.87■■□□□ 1.89
ETFA-203ENST00000557943 WRNQ14191 1432 aaPredicted RBP eCLIP26.81■■□□□ 1.88
ETFA-203ENST00000557943 RUSC2Q8N2Y8 1516 aa26.77■■□□□ 1.88
ETFA-203ENST00000557943 SYNJ1O43426 1573 aa26.74■■□□□ 1.87
ETFA-203ENST00000557943 EEA1Q15075 1411 aa26.68■■□□□ 1.86
ETFA-203ENST00000557943 PPARGC1BQ86YN6 1023 aaKnown RBP26.66■■□□□ 1.86
ETFA-203ENST00000557943 CSRNP3Q8WYN3 585 aa26.64■■□□□ 1.86
ETFA-203ENST00000557943 HMGXB3Q12766 1538 aa26.64■■□□□ 1.85
ETFA-203ENST00000557943 NCAPD3P42695 1498 aa26.63■■□□□ 1.85
ETFA-203ENST00000557943 CEP162Q5TB80 1403 aa26.57■■□□□ 1.84
ETFA-203ENST00000557943 TNIKQ9UKE5 1360 aa26.54■■□□□ 1.84
ETFA-203ENST00000557943 GOLGA3Q08378 1498 aa26.49■■□□□ 1.83
ETFA-203ENST00000557943 UBTFP17480 764 aaKnown RBP26.48■■□□□ 1.83
ETFA-203ENST00000557943 TOP2BQ02880 1626 aa26.45■■□□□ 1.82
ETFA-203ENST00000557943 KIF21BO75037 1637 aa26.38■■□□□ 1.81
ETFA-203ENST00000557943 BIVM-ERCC5R4GMW8 1640 aa26.38■■□□□ 1.81
ETFA-203ENST00000557943 CEP164Q9UPV0 1460 aa26.38■■□□□ 1.81
ETFA-203ENST00000557943 CFTRP13569 1480 aa26.31■■□□□ 1.8
ETFA-203ENST00000557943 TTBK1Q5TCY1 1321 aaPredicted RBP26.28■■□□□ 1.8
ETFA-203ENST00000557943 CUX1P39880 1505 aa26.28■■□□□ 1.8
ETFA-203ENST00000557943 RAPGEF2Q9Y4G8 1499 aa26.25■■□□□ 1.79
ETFA-203ENST00000557943 ZEB1P37275 1124 aaPredicted RBP26.21■■□□□ 1.79
ETFA-203ENST00000557943 CC2D2AQ9P2K1 1620 aa26.2■■□□□ 1.79
ETFA-203ENST00000557943 PRDM2Q13029 1718 aa26.17■■□□□ 1.78
ETFA-203ENST00000557943 CLIP1P30622 1438 aa26.16■■□□□ 1.78
ETFA-203ENST00000557943 CADPSQ9ULU8 1353 aa26.07■■□□□ 1.76
ETFA-203ENST00000557943 RANGAP1P46060 587 aaPredicted RBP26.05■■□□□ 1.76
ETFA-203ENST00000557943 PRXQ9BXM0 1461 aa26.05■■□□□ 1.76
ETFA-203ENST00000557943 ERICH3Q5RHP9 1530 aa26.02■■□□□ 1.76
ETFA-203ENST00000557943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.01■■□□□ 1.75
ETFA-203ENST00000557943 KIF27Q86VH2 1401 aa26.01■■□□□ 1.75
ETFA-203ENST00000557943 VPS8Q8N3P4 1428 aa26■■□□□ 1.75
ETFA-203ENST00000557943 CCER1Q8TC90 406 aaPredicted RBP25.9■■□□□ 1.74
ETFA-203ENST00000557943 CUX2O14529 1486 aa25.86■■□□□ 1.73
ETFA-203ENST00000557943 FGD5Q6ZNL6 1462 aa25.86■■□□□ 1.73
ETFA-203ENST00000557943 FANCD2Q9BXW9 1451 aa25.84■■□□□ 1.73
ETFA-203ENST00000557943 ARAP1Q96P48 1450 aa25.82■■□□□ 1.72
ETFA-203ENST00000557943 NESP48681 1621 aa25.79■■□□□ 1.72
ETFA-203ENST00000557943 APLP2Q06481 763 aa25.77■■□□□ 1.72
ETFA-203ENST00000557943 IGF1RP08069 1367 aa25.76■■□□□ 1.71
ETFA-203ENST00000557943 DNMBPQ6XZF7 1577 aa25.69■■□□□ 1.7
ETFA-203ENST00000557943 HNRNPUL2Q1KMD3 747 aaKnown RBP25.66■■□□□ 1.7
ETFA-203ENST00000557943 ARHGAP35Q9NRY4 1499 aa25.65■■□□□ 1.7
ETFA-203ENST00000557943 TOPBP1Q92547 1522 aa25.64■■□□□ 1.7
ETFA-203ENST00000557943 CARMIL1Q5VZK9 1371 aa25.64■■□□□ 1.69
ETFA-203ENST00000557943 RAD54L2Q9Y4B4 1467 aa25.63■■□□□ 1.69
ETFA-203ENST00000557943 POLA1P09884 1462 aaPredicted RBP25.6■■□□□ 1.69
ETFA-203ENST00000557943 DNAJC5BQ9UF47 199 aa25.58■■□□□ 1.69
ETFA-203ENST00000557943 LAMC3Q9Y6N6 1575 aa25.58■■□□□ 1.69
ETFA-203ENST00000557943 KANK4Q5T7N3 995 aaPredicted RBP25.56■■□□□ 1.68
ETFA-203ENST00000557943 ABCA10Q8WWZ4 1543 aa25.55■■□□□ 1.68
ETFA-203ENST00000557943 URB2Q14146 1524 aaKnown RBP25.51■■□□□ 1.67
ETFA-203ENST00000557943 WDR97A6NE52 1622 aa25.41■■□□□ 1.66
ETFA-203ENST00000557943 KIF21AQ7Z4S6 1674 aa25.4■■□□□ 1.66
ETFA-203ENST00000557943 PDS5BQ9NTI5 1447 aa25.39■■□□□ 1.65
ETFA-203ENST00000557943 CUL7Q14999 1698 aa25.37■■□□□ 1.65
ETFA-203ENST00000557943 RRBP1Q9P2E9 1410 aaKnown RBP25.33■■□□□ 1.65
ETFA-203ENST00000557943 P3H3Q8IVL6 736 aa25.32■■□□□ 1.64
ETFA-203ENST00000557943 TIAM1Q13009 1591 aa25.32■■□□□ 1.64
ETFA-203ENST00000557943 TDRD9Q8NDG6 1382 aaKnown RBP25.31■■□□□ 1.64
ETFA-203ENST00000557943 ABCA5Q8WWZ7 1642 aa25.3■■□□□ 1.64
ETFA-203ENST00000557943 CTTNBP2Q8WZ74 1663 aa25.28■■□□□ 1.64
ETFA-203ENST00000557943 PCF11O94913 1555 aaKnown RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms