RNA–Protein interactions for RNA: ENST00000517570.5

MTCL1-205, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MTCL1, Length 6,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-205ENST00000517570 DCAF8L2P0C7V8 631 aa28.13■■■□□ 2.09
MTCL1-205ENST00000517570 SUPT5HO00267 1087 aaKnown RBP27.15■■□□□ 1.94
MTCL1-205ENST00000517570 PELP1Q8IZL8 1130 aaKnown RBP26.77■■□□□ 1.88
MTCL1-205ENST00000517570 EHMT2Q96KQ7 1210 aa26.64■■□□□ 1.86
MTCL1-205ENST00000517570 SHROOM4Q9ULL8 1493 aa26.54■■□□□ 1.84
MTCL1-205ENST00000517570 NISCHQ9Y2I1 1504 aa26.32■■□□□ 1.8
MTCL1-205ENST00000517570 PCGF6Q9BYE7 350 aa25.94■■□□□ 1.74
MTCL1-205ENST00000517570 APLP2Q06481 763 aa25.92■■□□□ 1.74
MTCL1-205ENST00000517570 ERICH6Q7L0X2 663 aa25.87■■□□□ 1.73
MTCL1-205ENST00000517570 TTBK1Q5TCY1 1321 aaPredicted RBP25.83■■□□□ 1.73
MTCL1-205ENST00000517570 CENPBP07199 599 aaPredicted RBP25.75■■□□□ 1.71
MTCL1-205ENST00000517570 FAM9AQ8IZU1 332 aaPredicted RBP25.71■■□□□ 1.71
MTCL1-205ENST00000517570 CCER1Q8TC90 406 aaPredicted RBP25.55■■□□□ 1.68
MTCL1-205ENST00000517570 ZEB1P37275 1124 aaPredicted RBP25.49■■□□□ 1.67
MTCL1-205ENST00000517570 MYT1Q01538 1121 aa25.38■■□□□ 1.65
MTCL1-205ENST00000517570 YTHDC1Q96MU7 727 aaKnown RBP25.31■■□□□ 1.64
MTCL1-205ENST00000517570 RANGAP1P46060 587 aaPredicted RBP25.26■■□□□ 1.63
MTCL1-205ENST00000517570 NEFLP07196 543 aa25.14■■□□□ 1.61
MTCL1-205ENST00000517570 TRIM41Q8WV44 630 aa25.02■■□□□ 1.6
MTCL1-205ENST00000517570 ATP1B4Q9UN42 357 aaPredicted RBP24.96■■□□□ 1.59
MTCL1-205ENST00000517570 UBTFP17480 764 aaKnown RBP24.79■■□□□ 1.56
MTCL1-205ENST00000517570 PPARGC1BQ86YN6 1023 aaKnown RBP24.79■■□□□ 1.56
MTCL1-205ENST00000517570 HRCP23327 699 aa24.63■■□□□ 1.53
MTCL1-205ENST00000517570 TRIM26Q12899 539 aaPredicted RBP24.62■■□□□ 1.53
MTCL1-205ENST00000517570 DAXXQ9UER7 740 aaPredicted RBP24.52■■□□□ 1.52
MTCL1-205ENST00000517570 POLR3GLQ9BT43 218 aa24.29■■□□□ 1.48
MTCL1-205ENST00000517570 ITGAEP38570 1179 aa24.25■■□□□ 1.47
MTCL1-205ENST00000517570 LOC105371045A0A1W2PR82 267 aa24.15■■□□□ 1.46
MTCL1-205ENST00000517570 CNGB1Q14028 1251 aaPredicted RBP24.14■■□□□ 1.46
MTCL1-205ENST00000517570 HNRNPUL2Q1KMD3 747 aaKnown RBP24.11■■□□□ 1.45
MTCL1-205ENST00000517570 RTL5Q5HYW3 569 aaPredicted RBP24.09■■□□□ 1.45
MTCL1-205ENST00000517570 DIEXFQ68CQ4 756 aaKnown RBP24.04■■□□□ 1.44
MTCL1-205ENST00000517570 ZNF316A6NFI3 1004 aaPredicted RBP24.01■■□□□ 1.43
MTCL1-205ENST00000517570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.96■■□□□ 1.43
MTCL1-205ENST00000517570 CHIC1Q5VXU3 224 aa23.86■■□□□ 1.41
MTCL1-205ENST00000517570 MYT1LQ9UL68 1186 aa23.85■■□□□ 1.41
MTCL1-205ENST00000517570 BCANQ96GW7 911 aa23.83■■□□□ 1.41
MTCL1-205ENST00000517570 CLSPNQ9HAW4 1339 aa23.83■■□□□ 1.41
MTCL1-205ENST00000517570 GTF3C3Q9Y5Q9 886 aa23.83■■□□□ 1.41
MTCL1-205ENST00000517570 SLC4A1APQ9BWU0 796 aaKnown RBP23.71■■□□□ 1.39
MTCL1-205ENST00000517570 CDK11AQ9UQ88 783 aaPredicted RBP23.57■■□□□ 1.36
MTCL1-205ENST00000517570 NEUROD1Q13562 356 aa23.53■■□□□ 1.36
MTCL1-205ENST00000517570 FAM50AQ14320 339 aaKnown RBP23.52■■□□□ 1.36
MTCL1-205ENST00000517570 ANP32CO43423 234 aa23.43■■□□□ 1.34
MTCL1-205ENST00000517570 TRIM52Q96A61 297 aa23.42■■□□□ 1.34
MTCL1-205ENST00000517570 ACIN1Q9UKV3 1341 aaKnown RBP23.37■■□□□ 1.33
MTCL1-205ENST00000517570 ZNF326Q5BKZ1 582 aaKnown RBP23.24■■□□□ 1.31
MTCL1-205ENST00000517570 ANP32AP39687 249 aaKnown RBP23.2■■□□□ 1.3
MTCL1-205ENST00000517570 ZBTB47Q9UFB7 747 aaPredicted RBP23.18■■□□□ 1.3
MTCL1-205ENST00000517570 CANXP27824 592 aaKnown RBP23.16■■□□□ 1.3
MTCL1-205ENST00000517570 NPM2Q86SE8 214 aaKnown RBP23.16■■□□□ 1.3
MTCL1-205ENST00000517570 BCL11AQ9H165 835 aa23.16■■□□□ 1.3
MTCL1-205ENST00000517570 EIF5BO60841 1220 aaKnown RBP23.09■■□□□ 1.29
MTCL1-205ENST00000517570 FKBP8Q14318 412 aa23.01■■□□□ 1.27
MTCL1-205ENST00000517570 SLC24A1O60721 1099 aa22.92■■□□□ 1.26
MTCL1-205ENST00000517570 ANP32BQ92688 251 aaKnown RBP22.82■■□□□ 1.24
MTCL1-205ENST00000517570 NBR1Q14596 966 aa22.82■■□□□ 1.24
MTCL1-205ENST00000517570 NEFMP07197 916 aa22.76■■□□□ 1.23
MTCL1-205ENST00000517570 GLIPR1L2Q4G1C9 344 aa22.74■■□□□ 1.23
MTCL1-205ENST00000517570 HNRNPUQ00839 825 aaKnown RBP eCLIP22.72■■□□□ 1.23
MTCL1-205ENST00000517570 HSP90AA1P07900 732 aaKnown RBP22.71■■□□□ 1.23
MTCL1-205ENST00000517570 SCAF1Q9H7N4 1312 aaKnown RBP22.7■■□□□ 1.22
MTCL1-205ENST00000517570 P3H3Q8IVL6 736 aa22.69■■□□□ 1.22
MTCL1-205ENST00000517570 FAM9BQ8IZU0 186 aa22.67■■□□□ 1.22
MTCL1-205ENST00000517570 ARID3CA6NKF2 412 aa22.66■■□□□ 1.22
MTCL1-205ENST00000517570 ARXQ96QS3 562 aa22.63■■□□□ 1.21
MTCL1-205ENST00000517570 PABPN1Q86U42 306 aaKnown RBP eCLIP22.63■■□□□ 1.21
MTCL1-205ENST00000517570 UPF2Q9HAU5 1272 aaKnown RBP22.63■■□□□ 1.21
MTCL1-205ENST00000517570 DDX10Q13206 875 aaKnown RBP22.62■■□□□ 1.21
MTCL1-205ENST00000517570 SALL2Q9Y467 1007 aaPredicted RBP22.57■■□□□ 1.2
MTCL1-205ENST00000517570 TONSLQ96HA7 1378 aa22.57■■□□□ 1.2
MTCL1-205ENST00000517570 CCDC136Q96JN2 1154 aa22.55■■□□□ 1.2
MTCL1-205ENST00000517570 FBLN2P98095 1184 aa22.54■■□□□ 1.2
MTCL1-205ENST00000517570 ZNF777Q9ULD5 760 aaPredicted RBP22.54■■□□□ 1.2
MTCL1-205ENST00000517570 CSRNP3Q8WYN3 585 aa22.51■■□□□ 1.19
MTCL1-205ENST00000517570 IRX6P78412 446 aaPredicted RBP22.5■■□□□ 1.19
MTCL1-205ENST00000517570 DCAF1Q9Y4B6 1507 aa22.5■■□□□ 1.19
MTCL1-205ENST00000517570 MIER1Q8N108 512 aa22.43■■□□□ 1.18
MTCL1-205ENST00000517570 ABCC9O60706 1549 aa22.38■■□□□ 1.17
MTCL1-205ENST00000517570 TMC1Q8TDI8 760 aa22.36■■□□□ 1.17
MTCL1-205ENST00000517570 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.35■■□□□ 1.17
MTCL1-205ENST00000517570 MRS2Q9HD23 443 aa22.32■■□□□ 1.16
MTCL1-205ENST00000517570 WDR43Q15061 677 aaKnown RBP eCLIP22.27■■□□□ 1.16
MTCL1-205ENST00000517570 CHGAP10645 457 aaKnown RBP22.27■■□□□ 1.16
MTCL1-205ENST00000517570 ANP32EQ9BTT0 268 aa22.26■■□□□ 1.15
MTCL1-205ENST00000517570 HIRIP3Q9BW71 556 aaPredicted RBP22.25■■□□□ 1.15
MTCL1-205ENST00000517570 DDRGK1Q96HY6 314 aa22.23■■□□□ 1.15
MTCL1-205ENST00000517570 CHIC2Q9UKJ5 165 aa22.2■■□□□ 1.14
MTCL1-205ENST00000517570 TRIM44Q96DX7 344 aaPredicted RBP22.16■■□□□ 1.14
MTCL1-205ENST00000517570 BECN1Q14457 450 aa22.14■■□□□ 1.13
MTCL1-205ENST00000517570 KDM2AQ9Y2K7 1162 aa22.12■■□□□ 1.13
MTCL1-205ENST00000517570 STAG3Q9UJ98 1225 aa22.11■■□□□ 1.13
MTCL1-205ENST00000517570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.09■■□□□ 1.13
MTCL1-205ENST00000517570 MYH16Q9H6N6 1097 aa22.08■■□□□ 1.13
MTCL1-205ENST00000517570 RTN4Q9NQC3 1192 aaKnown RBP22.08■■□□□ 1.12
MTCL1-205ENST00000517570 NCLP19338 710 aaKnown RBP22.03■■□□□ 1.12
MTCL1-205ENST00000517570 SENP3-EIF4A1A0A087X0R7 540 aa22.02■■□□□ 1.12
MTCL1-205ENST00000517570 ESF1Q9H501 851 aaKnown RBP22■■□□□ 1.11
MTCL1-205ENST00000517570 SUPT16HQ9Y5B9 1047 aaKnown RBP22■■□□□ 1.11
MTCL1-205ENST00000517570 LAS1LQ9Y4W2 734 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms