RNA–Protein interactions for RNA: ENST00000278826.10

TMEM138-201, Transcript of transmembrane protein 138, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM138, Length 1,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM138-201ENST00000278826 NISCHQ9Y2I1 1504 aa37.27■■■■□ 3.56
TMEM138-201ENST00000278826 CCDC180Q9P1Z9 1646 aa32.28■■■□□ 2.76
TMEM138-201ENST00000278826 ZCCHC6Q5VYS8 1495 aaKnown RBP31.35■■■□□ 2.61
TMEM138-201ENST00000278826 DCAF1Q9Y4B6 1507 aa30.79■■■□□ 2.52
TMEM138-201ENST00000278826 DCAF8L2P0C7V8 631 aa30.77■■■□□ 2.52
TMEM138-201ENST00000278826 SHROOM4Q9ULL8 1493 aa30.7■■■□□ 2.51
TMEM138-201ENST00000278826 MYO15BQ96JP2 1530 aa30.29■■■□□ 2.44
TMEM138-201ENST00000278826 ABCC9O60706 1549 aa30.27■■■□□ 2.44
TMEM138-201ENST00000278826 NACADO15069 1562 aa30.01■■■□□ 2.4
TMEM138-201ENST00000278826 SCRIBQ14160 1630 aa29.76■■■□□ 2.36
TMEM138-201ENST00000278826 SUPT5HO00267 1087 aaKnown RBP29.76■■■□□ 2.35
TMEM138-201ENST00000278826 RB1CC1Q8TDY2 1594 aa29.67■■■□□ 2.34
TMEM138-201ENST00000278826 UNC13AQ9UPW8 1703 aa29.08■■■□□ 2.25
TMEM138-201ENST00000278826 RSF1Q96T23 1441 aaPredicted RBP29.07■■■□□ 2.24
TMEM138-201ENST00000278826 CECR2Q9BXF3 1484 aa28.95■■■□□ 2.23
TMEM138-201ENST00000278826 MROH2BQ7Z745 1585 aa28.81■■■□□ 2.2
TMEM138-201ENST00000278826 BICRAQ9NZM4 1560 aa28.77■■■□□ 2.2
TMEM138-201ENST00000278826 BAZ1AQ9NRL2 1556 aaPredicted RBP28.74■■■□□ 2.19
TMEM138-201ENST00000278826 PABPN1Q86U42 306 aaKnown RBP eCLIP28.67■■■□□ 2.18
TMEM138-201ENST00000278826 CHIC1Q5VXU3 224 aa28.66■■■□□ 2.18
TMEM138-201ENST00000278826 WIZO95785 1651 aa28.59■■■□□ 2.17
TMEM138-201ENST00000278826 SMARCA4P51532 1647 aa28.55■■■□□ 2.16
TMEM138-201ENST00000278826 TOP2AP11388 1531 aaKnown RBP28.28■■■□□ 2.12
TMEM138-201ENST00000278826 PEG3Q9GZU2 1588 aa28.18■■■□□ 2.1
TMEM138-201ENST00000278826 CCDC88BA6NC98 1476 aa28.05■■■□□ 2.08
TMEM138-201ENST00000278826 SMARCA2P51531 1590 aa28.04■■■□□ 2.08
TMEM138-201ENST00000278826 ATAD2BQ9ULI0 1458 aa28.02■■■□□ 2.08
TMEM138-201ENST00000278826 TRIM41Q8WV44 630 aa27.96■■■□□ 2.07
TMEM138-201ENST00000278826 EIF4G1Q04637 1599 aaKnown RBP27.91■■■□□ 2.06
TMEM138-201ENST00000278826 BAZ1BQ9UIG0 1483 aaKnown RBP27.88■■■□□ 2.05
TMEM138-201ENST00000278826 NCAPD3P42695 1498 aa27.73■■■□□ 2.03
TMEM138-201ENST00000278826 HMGXB3Q12766 1538 aa27.68■■■□□ 2.02
TMEM138-201ENST00000278826 LOC105371045A0A1W2PR82 267 aa27.61■■■□□ 2.01
TMEM138-201ENST00000278826 ABCC8Q09428 1581 aa27.55■■■□□ 2
TMEM138-201ENST00000278826 FAM9AQ8IZU1 332 aaPredicted RBP27.46■■□□□ 1.99
TMEM138-201ENST00000278826 CC2D2AQ9P2K1 1620 aa27.39■■□□□ 1.97
TMEM138-201ENST00000278826 WRNQ14191 1432 aaPredicted RBP eCLIP27.35■■□□□ 1.97
TMEM138-201ENST00000278826 CFTRP13569 1480 aa27.21■■□□□ 1.95
TMEM138-201ENST00000278826 SYNJ1O43426 1573 aa27.19■■□□□ 1.94
TMEM138-201ENST00000278826 EEA1Q15075 1411 aa27.15■■□□□ 1.94
TMEM138-201ENST00000278826 SOGA1O94964 1423 aa27.14■■□□□ 1.93
TMEM138-201ENST00000278826 TOP2BQ02880 1626 aa27.06■■□□□ 1.92
TMEM138-201ENST00000278826 CADPSQ9ULU8 1353 aa27.06■■□□□ 1.92
TMEM138-201ENST00000278826 EHMT2Q96KQ7 1210 aa27.06■■□□□ 1.92
TMEM138-201ENST00000278826 PRDM2Q13029 1718 aa27.04■■□□□ 1.92
TMEM138-201ENST00000278826 CSRNP3Q8WYN3 585 aa27.02■■□□□ 1.92
TMEM138-201ENST00000278826 RUSC2Q8N2Y8 1516 aa27.01■■□□□ 1.91
TMEM138-201ENST00000278826 BIVM-ERCC5R4GMW8 1640 aa27.01■■□□□ 1.91
TMEM138-201ENST00000278826 CUX1P39880 1505 aa26.91■■□□□ 1.9
TMEM138-201ENST00000278826 TNIKQ9UKE5 1360 aa26.79■■□□□ 1.88
TMEM138-201ENST00000278826 GOLGA3Q08378 1498 aa26.78■■□□□ 1.88
TMEM138-201ENST00000278826 CEP164Q9UPV0 1460 aa26.75■■□□□ 1.87
TMEM138-201ENST00000278826 KIF21BO75037 1637 aa26.74■■□□□ 1.87
TMEM138-201ENST00000278826 FANCD2Q9BXW9 1451 aa26.74■■□□□ 1.87
TMEM138-201ENST00000278826 UBTFP17480 764 aaKnown RBP26.72■■□□□ 1.87
TMEM138-201ENST00000278826 PCGF6Q9BYE7 350 aa26.72■■□□□ 1.87
TMEM138-201ENST00000278826 LAMC3Q9Y6N6 1575 aa26.7■■□□□ 1.86
TMEM138-201ENST00000278826 NESP48681 1621 aa26.69■■□□□ 1.86
TMEM138-201ENST00000278826 CEP162Q5TB80 1403 aa26.66■■□□□ 1.86
TMEM138-201ENST00000278826 DNAJC5BQ9UF47 199 aa26.64■■□□□ 1.85
TMEM138-201ENST00000278826 KIF27Q86VH2 1401 aa26.64■■□□□ 1.85
TMEM138-201ENST00000278826 TRIM26Q12899 539 aaPredicted RBP26.62■■□□□ 1.85
TMEM138-201ENST00000278826 FGD5Q6ZNL6 1462 aa26.57■■□□□ 1.84
TMEM138-201ENST00000278826 RAPGEF2Q9Y4G8 1499 aa26.56■■□□□ 1.84
TMEM138-201ENST00000278826 DNMBPQ6XZF7 1577 aa26.55■■□□□ 1.84
TMEM138-201ENST00000278826 PRXQ9BXM0 1461 aa26.53■■□□□ 1.84
TMEM138-201ENST00000278826 PDS5BQ9NTI5 1447 aa26.52■■□□□ 1.84
TMEM138-201ENST00000278826 ERICH3Q5RHP9 1530 aa26.51■■□□□ 1.83
TMEM138-201ENST00000278826 TOPBP1Q92547 1522 aa26.49■■□□□ 1.83
TMEM138-201ENST00000278826 CUX2O14529 1486 aa26.48■■□□□ 1.83
TMEM138-201ENST00000278826 CLIP1P30622 1438 aa26.39■■□□□ 1.81
TMEM138-201ENST00000278826 POLA1P09884 1462 aaPredicted RBP26.38■■□□□ 1.81
TMEM138-201ENST00000278826 IGF1RP08069 1367 aa26.38■■□□□ 1.81
TMEM138-201ENST00000278826 URB2Q14146 1524 aaKnown RBP26.38■■□□□ 1.81
TMEM138-201ENST00000278826 KIF21AQ7Z4S6 1674 aa26.34■■□□□ 1.81
TMEM138-201ENST00000278826 ABCA10Q8WWZ4 1543 aa26.34■■□□□ 1.81
TMEM138-201ENST00000278826 RAD54L2Q9Y4B4 1467 aa26.32■■□□□ 1.8
TMEM138-201ENST00000278826 PPARGC1BQ86YN6 1023 aaKnown RBP26.28■■□□□ 1.8
TMEM138-201ENST00000278826 CARMIL1Q5VZK9 1371 aa26.25■■□□□ 1.79
TMEM138-201ENST00000278826 HRCP23327 699 aa26.23■■□□□ 1.79
TMEM138-201ENST00000278826 VPS8Q8N3P4 1428 aa26.19■■□□□ 1.78
TMEM138-201ENST00000278826 RANGAP1P46060 587 aaPredicted RBP26.18■■□□□ 1.78
TMEM138-201ENST00000278826 WDR97A6NE52 1622 aa26.17■■□□□ 1.78
TMEM138-201ENST00000278826 MRC2Q9UBG0 1479 aa26.13■■□□□ 1.77
TMEM138-201ENST00000278826 CUL7Q14999 1698 aa26.08■■□□□ 1.77
TMEM138-201ENST00000278826 ABCA5Q8WWZ7 1642 aa26.06■■□□□ 1.76
TMEM138-201ENST00000278826 TDRD9Q8NDG6 1382 aaKnown RBP26.06■■□□□ 1.76
TMEM138-201ENST00000278826 TARBP1Q13395 1621 aaKnown RBP26.05■■□□□ 1.76
TMEM138-201ENST00000278826 ARAP1Q96P48 1450 aa26.05■■□□□ 1.76
TMEM138-201ENST00000278826 GAPVD1Q14C86 1478 aa26.03■■□□□ 1.76
TMEM138-201ENST00000278826 APLP2Q06481 763 aa26.02■■□□□ 1.76
TMEM138-201ENST00000278826 ARHGAP35Q9NRY4 1499 aa25.99■■□□□ 1.75
TMEM138-201ENST00000278826 TTBK1Q5TCY1 1321 aaPredicted RBP25.98■■□□□ 1.75
TMEM138-201ENST00000278826 WDR62O43379 1518 aa25.96■■□□□ 1.75
TMEM138-201ENST00000278826 ERCC6Q03468 1493 aa25.92■■□□□ 1.74
TMEM138-201ENST00000278826 IFT140Q96RY7 1462 aa25.88■■□□□ 1.73
TMEM138-201ENST00000278826 CTTNBP2Q8WZ74 1663 aa25.85■■□□□ 1.73
TMEM138-201ENST00000278826 AQRO60306 1485 aaKnown RBP eCLIP25.82■■□□□ 1.726e-7■■□□□ 12.6
TMEM138-201ENST00000278826 PBRM1Q86U86 1689 aa25.82■■□□□ 1.72
TMEM138-201ENST00000278826 THOC2Q8NI27 1593 aaKnown RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms