RNA–Protein interactions for RNA: ENST00000392008.6

COPS8-202, Transcript of COP9 signalosome subunit 8, humanhuman

TSL 2 BASIC

Gene COPS8, Length 1,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-202ENST00000392008 NISCHQ9Y2I1 1504 aa41.79■■■■■ 4.28
COPS8-202ENST00000392008 CCDC180Q9P1Z9 1646 aa37.07■■■■□ 3.52
COPS8-202ENST00000392008 ABCC9O60706 1549 aa36.47■■■■□ 3.43
COPS8-202ENST00000392008 DCAF8L2P0C7V8 631 aa35.08■■■■□ 3.21
COPS8-202ENST00000392008 RB1CC1Q8TDY2 1594 aa34.96■■■■□ 3.19
COPS8-202ENST00000392008 NACADO15069 1562 aa34.9■■■■□ 3.18
COPS8-202ENST00000392008 ZCCHC6Q5VYS8 1495 aaKnown RBP34.79■■■■□ 3.16
COPS8-202ENST00000392008 MYO15BQ96JP2 1530 aa34.64■■■■□ 3.14
COPS8-202ENST00000392008 DCAF1Q9Y4B6 1507 aa34.5■■■■□ 3.11
COPS8-202ENST00000392008 UNC13AQ9UPW8 1703 aa34.16■■■■□ 3.06
COPS8-202ENST00000392008 PABPN1Q86U42 306 aaKnown RBP eCLIP34.13■■■■□ 3.05
COPS8-202ENST00000392008 SCRIBQ14160 1630 aa33.94■■■■□ 3.02
COPS8-202ENST00000392008 BICRAQ9NZM4 1560 aa33.94■■■■□ 3.02
COPS8-202ENST00000392008 DNAJC5BQ9UF47 199 aa33.55■■■□□ 2.96
COPS8-202ENST00000392008 SHROOM4Q9ULL8 1493 aa33.46■■■□□ 2.95
COPS8-202ENST00000392008 EIF4G1Q04637 1599 aaKnown RBP33.05■■■□□ 2.88
COPS8-202ENST00000392008 CC2D2AQ9P2K1 1620 aa32.93■■■□□ 2.86
COPS8-202ENST00000392008 CECR2Q9BXF3 1484 aa32.73■■■□□ 2.83
COPS8-202ENST00000392008 SMARCA4P51532 1647 aa32.41■■■□□ 2.78
COPS8-202ENST00000392008 BAZ1AQ9NRL2 1556 aaPredicted RBP32.36■■■□□ 2.77
COPS8-202ENST00000392008 ATAD2BQ9ULI0 1458 aa32.28■■■□□ 2.76
COPS8-202ENST00000392008 MROH2BQ7Z745 1585 aa32.25■■■□□ 2.75
COPS8-202ENST00000392008 NCAPD3P42695 1498 aa32.24■■■□□ 2.75
COPS8-202ENST00000392008 SMARCA2P51531 1590 aa32.18■■■□□ 2.74
COPS8-202ENST00000392008 PEG3Q9GZU2 1588 aa32.06■■■□□ 2.72
COPS8-202ENST00000392008 HMGXB3Q12766 1538 aa32.04■■■□□ 2.72
COPS8-202ENST00000392008 BAZ1BQ9UIG0 1483 aaKnown RBP32■■■□□ 2.71
COPS8-202ENST00000392008 WIZO95785 1651 aa31.89■■■□□ 2.69
COPS8-202ENST00000392008 RSF1Q96T23 1441 aaPredicted RBP31.86■■■□□ 2.69
COPS8-202ENST00000392008 NESP48681 1621 aa31.55■■■□□ 2.64
COPS8-202ENST00000392008 TOP2AP11388 1531 aaKnown RBP31.5■■■□□ 2.63
COPS8-202ENST00000392008 ERCC6Q03468 1493 aa31.4■■■□□ 2.62
COPS8-202ENST00000392008 LAMC3Q9Y6N6 1575 aa31.36■■■□□ 2.61
COPS8-202ENST00000392008 CADPSQ9ULU8 1353 aa31.32■■■□□ 2.61
COPS8-202ENST00000392008 PDS5BQ9NTI5 1447 aa31.19■■■□□ 2.58
COPS8-202ENST00000392008 CCDC88BA6NC98 1476 aa31.19■■■□□ 2.58
COPS8-202ENST00000392008 SUPT5HO00267 1087 aaKnown RBP31.14■■■□□ 2.58
COPS8-202ENST00000392008 CFTRP13569 1480 aa31.12■■■□□ 2.57
COPS8-202ENST00000392008 KIF21AQ7Z4S6 1674 aa31.1■■■□□ 2.57
COPS8-202ENST00000392008 CUX2O14529 1486 aa31.01■■■□□ 2.55
COPS8-202ENST00000392008 THOC2Q8NI27 1593 aaKnown RBP31■■■□□ 2.55
COPS8-202ENST00000392008 FANCD2Q9BXW9 1451 aa30.97■■■□□ 2.55
COPS8-202ENST00000392008 CEP164Q9UPV0 1460 aa30.92■■■□□ 2.54
COPS8-202ENST00000392008 MRC2Q9UBG0 1479 aa30.87■■■□□ 2.53
COPS8-202ENST00000392008 PRDM2Q13029 1718 aa30.78■■■□□ 2.52
COPS8-202ENST00000392008 WDR62O43379 1518 aa30.75■■■□□ 2.51
COPS8-202ENST00000392008 URB2Q14146 1524 aaKnown RBP30.67■■■□□ 2.5
COPS8-202ENST00000392008 TOPBP1Q92547 1522 aa30.46■■■□□ 2.47
COPS8-202ENST00000392008 ABCC8Q09428 1581 aa30.4■■■□□ 2.46
COPS8-202ENST00000392008 DNMBPQ6XZF7 1577 aa30.39■■■□□ 2.46
COPS8-202ENST00000392008 IFT140Q96RY7 1462 aa30.25■■■□□ 2.43
COPS8-202ENST00000392008 CUX1P39880 1505 aa30.24■■■□□ 2.43
COPS8-202ENST00000392008 POLA1P09884 1462 aaPredicted RBP30.21■■■□□ 2.43
COPS8-202ENST00000392008 ZNF608Q9ULD9 1512 aaPredicted RBP30.19■■■□□ 2.42
COPS8-202ENST00000392008 DNAJC5Q9H3Z4 198 aa30.18■■■□□ 2.42
COPS8-202ENST00000392008 FGD5Q6ZNL6 1462 aa30.14■■■□□ 2.42
COPS8-202ENST00000392008 RAD54L2Q9Y4B4 1467 aa30.13■■■□□ 2.41
COPS8-202ENST00000392008 SOGA1O94964 1423 aa30.11■■■□□ 2.41
COPS8-202ENST00000392008 TARBP1Q13395 1621 aaKnown RBP30.11■■■□□ 2.41
COPS8-202ENST00000392008 WRNQ14191 1432 aaPredicted RBP eCLIP30.04■■■□□ 2.4
COPS8-202ENST00000392008 AQRO60306 1485 aaKnown RBP eCLIP30.03■■■□□ 2.4
COPS8-202ENST00000392008 EIF4G3O43432 1585 aaKnown RBP30.01■■■□□ 2.39
COPS8-202ENST00000392008 TDRD9Q8NDG6 1382 aaKnown RBP29.98■■■□□ 2.39
COPS8-202ENST00000392008 SYNJ1O43426 1573 aa29.96■■■□□ 2.39
COPS8-202ENST00000392008 TOP2BQ02880 1626 aa29.93■■■□□ 2.38
COPS8-202ENST00000392008 BIVM-ERCC5R4GMW8 1640 aa29.9■■■□□ 2.38
COPS8-202ENST00000392008 WDR97A6NE52 1622 aa29.82■■■□□ 2.36
COPS8-202ENST00000392008 ABCA10Q8WWZ4 1543 aa29.82■■■□□ 2.36
COPS8-202ENST00000392008 OSCARQ8IYS5 282 aa29.8■■■□□ 2.36
COPS8-202ENST00000392008 GAPVD1Q14C86 1478 aa29.73■■■□□ 2.35
COPS8-202ENST00000392008 GRIN2BQ13224 1484 aa29.72■■■□□ 2.35
COPS8-202ENST00000392008 FBLN2P98095 1184 aa29.72■■■□□ 2.35
COPS8-202ENST00000392008 SNAPC4Q5SXM2 1469 aa29.71■■■□□ 2.35
COPS8-202ENST00000392008 ABCA5Q8WWZ7 1642 aa29.68■■■□□ 2.34
COPS8-202ENST00000392008 PBRM1Q86U86 1689 aa29.63■■■□□ 2.33
COPS8-202ENST00000392008 CHD1O14646 1710 aa29.63■■■□□ 2.33
COPS8-202ENST00000392008 MAGI1Q96QZ7 1491 aaPredicted RBP29.62■■■□□ 2.33
COPS8-202ENST00000392008 CHMP7Q8WUX9 453 aaPredicted RBP29.59■■■□□ 2.33
COPS8-202ENST00000392008 SYNJ2O15056 1496 aa29.53■■■□□ 2.32
COPS8-202ENST00000392008 ERICH3Q5RHP9 1530 aa29.44■■■□□ 2.3
COPS8-202ENST00000392008 ADAMTS12P58397 1594 aa29.41■■■□□ 2.3
COPS8-202ENST00000392008 KIF27Q86VH2 1401 aa29.39■■■□□ 2.3
COPS8-202ENST00000392008 FHAD1B1AJZ9 1412 aa29.38■■■□□ 2.29
COPS8-202ENST00000392008 TRIM41Q8WV44 630 aa29.36■■■□□ 2.29
COPS8-202ENST00000392008 GRIN2AQ12879 1464 aa29.35■■■□□ 2.29
COPS8-202ENST00000392008 IGF1RP08069 1367 aa29.31■■■□□ 2.28
COPS8-202ENST00000392008 CLASP1Q7Z460 1538 aa29.31■■■□□ 2.28
COPS8-202ENST00000392008 RIMBP3CA6NJZ7 1639 aa29.29■■■□□ 2.28
COPS8-202ENST00000392008 RIMBP3BA6NNM3 1639 aa29.29■■■□□ 2.28
COPS8-202ENST00000392008 RIMBP3Q9UFD9 1639 aa29.29■■■□□ 2.28
COPS8-202ENST00000392008 ARHGEF11O15085 1522 aa29.29■■■□□ 2.28
COPS8-202ENST00000392008 CEP170Q5SW79 1584 aa29.21■■■□□ 2.27
COPS8-202ENST00000392008 NUP160Q12769 1436 aa29.21■■■□□ 2.27
COPS8-202ENST00000392008 RUSC2Q8N2Y8 1516 aa29.2■■■□□ 2.27
COPS8-202ENST00000392008 CUL7Q14999 1698 aa29.14■■■□□ 2.26
COPS8-202ENST00000392008 CARMIL1Q5VZK9 1371 aa29.14■■■□□ 2.25
COPS8-202ENST00000392008 CYB5RLQ6IPT4 315 aa29.11■■■□□ 2.25
COPS8-202ENST00000392008 ARAP1Q96P48 1450 aa29.07■■■□□ 2.24
COPS8-202ENST00000392008 CHIC1Q5VXU3 224 aa28.99■■■□□ 2.23
COPS8-202ENST00000392008 ERCC6L2Q5T890 1561 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms