Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.972e-8■■■■■ 39.5
XRN2Q9H0D6 C19orf25-212ENST00000592605 357 ntTSL 320.72■□□□□ 0.912e-8■■■■■ 39.5
XRN2Q9H0D6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.6■□□□□ 0.892e-8■■■■■ 39.5
XRN2Q9H0D6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.58■□□□□ 0.882e-8■■■■■ 39.5
XRN2Q9H0D6 C19orf25-208ENST00000589421 492 ntTSL 219.29■□□□□ 0.682e-8■■■■■ 39.5
XRN2Q9H0D6 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.082e-6■■■■■ 39.5
XRN2Q9H0D6 TRABD-205ENST00000463233 2404 ntTSL 1 (best)20.52■□□□□ 0.886e-8■■■■■ 39.4
XRN2Q9H0D6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.56e-8■■■■■ 39.4
XRN2Q9H0D6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.446e-8■■■■■ 39.4
XRN2Q9H0D6 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.312e-7■■■■■ 39.4
XRN2Q9H0D6 RAB40C-211ENST00000568586 648 ntTSL 234.92■■■■□ 3.181e-10■■■■■ 39.4
XRN2Q9H0D6 RAB40C-212ENST00000569575 692 ntTSL 226.44■■□□□ 1.821e-10■■■■■ 39.4
XRN2Q9H0D6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.631e-10■■■■■ 39.4
XRN2Q9H0D6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.591e-10■■■■■ 39.4
XRN2Q9H0D6 RAB40C-210ENST00000566290 753 ntTSL 318.7■□□□□ 0.581e-10■■■■■ 39.4
XRN2Q9H0D6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.451e-10■■■■■ 39.4
XRN2Q9H0D6 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.09■□□□□ 0.332e-6■■■■■ 39.4
XRN2Q9H0D6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.291e-10■■■■■ 39.4
XRN2Q9H0D6 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC9.47□□□□□ -0.892e-6■■■■■ 39.4
XRN2Q9H0D6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.8■□□□□ 0.124e-8■■■■■ 39.4
XRN2Q9H0D6 DEAF1-203ENST00000525626 585 ntTSL 315.48■□□□□ 0.072e-7■■■■■ 39.3
XRN2Q9H0D6 KLF13-206ENST00000558921 440 ntTSL 331.34■■■□□ 2.613e-9■■■■■ 39.3
XRN2Q9H0D6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.553e-9■■■■■ 39.3
XRN2Q9H0D6 RPL3-212ENST00000467105 1396 ntTSL 1 (best)17.33■□□□□ 0.362e-10■■■■■ 39.2
XRN2Q9H0D6 YTHDF3-211ENST00000619337 545 ntTSL 427.71■■■□□ 2.031e-9■■■■■ 39.1
XRN2Q9H0D6 YTHDF3-207ENST00000613853 563 ntTSL 425.19■■□□□ 1.621e-9■■■■■ 39.1
XRN2Q9H0D6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.07■□□□□ 0.81e-9■■■■■ 39.1
XRN2Q9H0D6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.95■□□□□ 0.621e-9■■■■■ 39.1
XRN2Q9H0D6 TNRC6B-204ENST00000441751 415 ntTSL 517.74■□□□□ 0.431e-9■■■■■ 39.1
XRN2Q9H0D6 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.291e-9■■■■■ 39.1
XRN2Q9H0D6 YPEL5-203ENST00000379520 2560 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.661e-7■■■■■ 39.1
XRN2Q9H0D6 YPEL5-208ENST00000490211 653 ntTSL 57.22□□□□□ -1.251e-7■■■■■ 39.1
XRN2Q9H0D6 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.341e-7■■■■■ 39.1
XRN2Q9H0D6 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.361e-7■■■■■ 39.1
XRN2Q9H0D6 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.441e-7■■■■■ 39.1
XRN2Q9H0D6 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.571e-9■■■■■ 39.1
XRN2Q9H0D6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.1■□□□□ 0.653e-6■■■■■ 39.1
XRN2Q9H0D6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.46■□□□□ 0.233e-6■■■■■ 39.1
XRN2Q9H0D6 TULP4-207ENST00000620026 680 ntTSL 425.11■■□□□ 1.614e-8■■■■■ 39.1
XRN2Q9H0D6 POLR2H-207ENST00000455712 823 ntTSL 315.19■□□□□ 0.025e-12■■■■■ 39.1
XRN2Q9H0D6 HMBOX1-209ENST00000522468 817 ntTSL 317.12■□□□□ 0.335e-10■■■■■ 38.9
XRN2Q9H0D6 NFKBIA-202ENST00000553342 212 ntTSL 524.13■■□□□ 1.453e-9■■■■■ 38.9
XRN2Q9H0D6 RBMS1-214ENST00000491781 1533 ntTSL 1 (best)19.51■□□□□ 0.717e-7■■■■■ 38.9
XRN2Q9H0D6 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.317e-7■■■■■ 38.9
XRN2Q9H0D6 RBMS1-209ENST00000474820 4016 ntTSL 1 (best)5.05□□□□□ -1.67e-7■■■■■ 38.9
XRN2Q9H0D6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.143e-9■■■■■ 38.8
XRN2Q9H0D6 OAZ1-201ENST00000581150 1131 ntTSL 520.25■□□□□ 0.833e-9■■■■■ 38.8
XRN2Q9H0D6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.783e-9■■■■■ 38.8
XRN2Q9H0D6 OAZ1-210ENST00000593012 1357 ntTSL 219.36■□□□□ 0.693e-9■■■■■ 38.8
XRN2Q9H0D6 OAZ1-207ENST00000590943 1012 ntTSL 218.65■□□□□ 0.583e-9■■■■■ 38.8
XRN2Q9H0D6 AAMP-210ENST00000494720 1134 ntTSL 227.04■■□□□ 1.924e-6■■■■■ 38.8
XRN2Q9H0D6 OAZ1-204ENST00000588673 780 ntTSL 324.03■■□□□ 1.445e-9■■■■■ 38.7
XRN2Q9H0D6 PCF11-206ENST00000533018 580 ntTSL 321.55■■□□□ 1.045e-9■■■■■ 38.6
XRN2Q9H0D6 PCF11-203ENST00000530304 2649 ntTSL 1 (best)19.22■□□□□ 0.675e-9■■■■■ 38.6
XRN2Q9H0D6 PCF11-207ENST00000624931 1720 nt18.58■□□□□ 0.575e-9■■■■■ 38.6
XRN2Q9H0D6 PCF11-204ENST00000530660 3309 ntTSL 213.17□□□□□ -0.35e-9■■■■■ 38.6
XRN2Q9H0D6 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.485e-9■■■■■ 38.6
XRN2Q9H0D6 PROSER2-204ENST00000474155 728 ntTSL 325.43■■□□□ 1.662e-6■■■■■ 38.6
XRN2Q9H0D6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.522e-6■■■■■ 38.6
XRN2Q9H0D6 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.262e-6■■■■■ 38.6
XRN2Q9H0D6 KIAA0930-205ENST00000417906 516 ntTSL 519.82■□□□□ 0.764e-6■■■■■ 38.4
XRN2Q9H0D6 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.94e-6■■■■■ 38.4
XRN2Q9H0D6 ADARB1-208ENST00000462214 587 ntTSL 310.37□□□□□ -0.751e-6■■■■■ 38.4
XRN2Q9H0D6 ARHGEF2-215ENST00000487755 2176 ntTSL 215.94■□□□□ 0.142e-9■■■■■ 38.3
XRN2Q9H0D6 ASNS-211ENST00000451771 562 ntTSL 223.07■■□□□ 1.281e-10■■■■■ 38.3
XRN2Q9H0D6 AC079781.5-203ENST00000641315 2059 nt20.24■□□□□ 0.831e-10■■■■■ 38.3
XRN2Q9H0D6 AC079781.5-201ENST00000641390 3211 nt17.73■□□□□ 0.431e-10■■■■■ 38.3
XRN2Q9H0D6 ASNS-212ENST00000453600 573 ntTSL 317.11■□□□□ 0.331e-10■■■■■ 38.3
XRN2Q9H0D6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.121e-10■■■■■ 38.3
XRN2Q9H0D6 AC079781.5-202ENST00000641784 3743 ntBASIC14.24□□□□□ -0.131e-10■■■■■ 38.3
XRN2Q9H0D6 ASNS-205ENST00000422745 1865 ntTSL 5 BASIC11.17□□□□□ -0.621e-10■■■■■ 38.3
XRN2Q9H0D6 ASNS-202ENST00000394308 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.691e-10■■■■■ 38.3
XRN2Q9H0D6 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC9.03□□□□□ -0.961e-10■■■■■ 38.3
XRN2Q9H0D6 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.22□□□□□ -1.411e-10■■■■■ 38.3
XRN2Q9H0D6 CTTN-206ENST00000482755 1087 ntTSL 223.82■■□□□ 1.43e-9■■■■■ 38.3
XRN2Q9H0D6 CTTN-211ENST00000527622 597 ntTSL 422.74■■□□□ 1.233e-9■■■■■ 38.3
XRN2Q9H0D6 MVD-208ENST00000563785 888 ntTSL 221.32■■□□□ 15e-7■■■■■ 38.2
XRN2Q9H0D6 TFRC-211ENST00000475593 875 ntTSL 37.66□□□□□ -1.181e-15■■■■■ 38.2
XRN2Q9H0D6 TFRC-214ENST00000483983 757 ntTSL 25.73□□□□□ -1.491e-15■■■■■ 38.2
XRN2Q9H0D6 IMP4-213ENST00000473689 877 ntTSL 524.91■■□□□ 1.584e-11■■■■■ 38.2
XRN2Q9H0D6 IMP4-210ENST00000462392 1793 ntTSL 321.92■■□□□ 1.14e-11■■■■■ 38.2
XRN2Q9H0D6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.61■□□□□ 0.894e-11■■■■■ 38.2
XRN2Q9H0D6 IQSEC1-202ENST00000473088 545 ntTSL 420.61■□□□□ 0.894e-7■■■■■ 38.2
XRN2Q9H0D6 IMP4-211ENST00000464432 939 ntTSL 520.57■□□□□ 0.884e-11■■■■■ 38.2
XRN2Q9H0D6 IMP4-208ENST00000460766 2379 ntTSL 1 (best)20.41■□□□□ 0.864e-11■■■■■ 38.2
XRN2Q9H0D6 IMP4-215ENST00000477375 564 ntTSL 220.31■□□□□ 0.844e-11■■■■■ 38.2
XRN2Q9H0D6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.714e-11■■■■■ 38.2
XRN2Q9H0D6 IMP4-202ENST00000409649 822 ntTSL 218.78■□□□□ 0.64e-11■■■■■ 38.2
XRN2Q9H0D6 IMP4-216ENST00000490895 776 ntTSL 318.43■□□□□ 0.544e-11■■■■■ 38.2
XRN2Q9H0D6 IMP4-204ENST00000428740 924 ntTSL 317.82■□□□□ 0.444e-11■■■■■ 38.2
XRN2Q9H0D6 IMP4-205ENST00000452955 923 ntTSL 314.54□□□□□ -0.084e-11■■■■■ 38.2
XRN2Q9H0D6 DDIT4-203ENST00000473155 753 ntTSL 1 (best)25.1■■□□□ 1.613e-9■■■■■ 38.2
XRN2Q9H0D6 SLC2A4RG-204ENST00000482718 541 ntTSL 231.44■■■□□ 2.621e-16■■■■■ 38.2
XRN2Q9H0D6 SLC2A4RG-205ENST00000485897 518 ntTSL 526.57■■□□□ 1.841e-8■■■■■ 38.2
XRN2Q9H0D6 SLC2A4RG-206ENST00000491109 637 ntTSL 217.38■□□□□ 0.371e-8■■■■■ 38.2
XRN2Q9H0D6 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.191e-7■■■■■ 38.2
XRN2Q9H0D6 SIAH1-207ENST00000568007 2683 ntTSL 1 (best)12.42□□□□□ -0.421e-7■■■■■ 38.2
XRN2Q9H0D6 SIAH1-204ENST00000563745 589 ntTSL 49.5□□□□□ -0.891e-7■■■■■ 38.2
XRN2Q9H0D6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.972e-11■■■■■ 38.1
XRN2Q9H0D6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.85■□□□□ 0.772e-11■■■■■ 38.1
Retrieved 100 of 21,068 protein–RNA pairs in 364.8 ms