RNA–Protein interactions for RNA: ENST00000482755.6

CTTN-206, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-206ENST00000482755 NISCHQ9Y2I1 1504 aa49.02■■■■■ 5.44
CTTN-206ENST00000482755 ABCC9O60706 1549 aa43.97■■■■■ 4.63
CTTN-206ENST00000482755 CCDC180Q9P1Z9 1646 aa43.86■■■■■ 4.61
CTTN-206ENST00000482755 RB1CC1Q8TDY2 1594 aa41.8■■■■■ 4.28
CTTN-206ENST00000482755 NACADO15069 1562 aa41.54■■■■■ 4.24
CTTN-206ENST00000482755 DCAF8L2P0C7V8 631 aa41.4■■■■■ 4.22
CTTN-206ENST00000482755 DNAJC5BQ9UF47 199 aa41.31■■■■■ 4.2
CTTN-206ENST00000482755 MYO15BQ96JP2 1530 aa41.02■■■■■ 4.16
CTTN-206ENST00000482755 PABPN1Q86U42 306 aaKnown RBP eCLIP41■■■■■ 4.15
CTTN-206ENST00000482755 UNC13AQ9UPW8 1703 aa40.73■■■■■ 4.11
CTTN-206ENST00000482755 ZCCHC6Q5VYS8 1495 aaKnown RBP40.64■■■■■ 4.1
CTTN-206ENST00000482755 BICRAQ9NZM4 1560 aa40.61■■■■■ 4.09
CTTN-206ENST00000482755 DCAF1Q9Y4B6 1507 aa40.49■■■■■ 4.07
CTTN-206ENST00000482755 SHROOM4Q9ULL8 1493 aa40.08■■■■■ 4.01
CTTN-206ENST00000482755 SCRIBQ14160 1630 aa40.02■■■■■ 4
CTTN-206ENST00000482755 CC2D2AQ9P2K1 1620 aa39.67■■■■□ 3.94
CTTN-206ENST00000482755 EIF4G1Q04637 1599 aaKnown RBP39.62■■■■□ 3.93
CTTN-206ENST00000482755 CECR2Q9BXF3 1484 aa39.62■■■■□ 3.93
CTTN-206ENST00000482755 NCAPD3P42695 1498 aa38.42■■■■□ 3.74
CTTN-206ENST00000482755 ATAD2BQ9ULI0 1458 aa38.29■■■■□ 3.72
CTTN-206ENST00000482755 SMARCA4P51532 1647 aa38.18■■■■□ 3.7
CTTN-206ENST00000482755 SMARCA2P51531 1590 aa38.13■■■■□ 3.69
CTTN-206ENST00000482755 HMGXB3Q12766 1538 aa38.07■■■■□ 3.69
CTTN-206ENST00000482755 BAZ1AQ9NRL2 1556 aaPredicted RBP38.02■■■■□ 3.68
CTTN-206ENST00000482755 ERCC6Q03468 1493 aa37.95■■■■□ 3.67
CTTN-206ENST00000482755 DNAJC5Q9H3Z4 198 aa37.91■■■■□ 3.66
CTTN-206ENST00000482755 BAZ1BQ9UIG0 1483 aaKnown RBP37.89■■■■□ 3.66
CTTN-206ENST00000482755 CUX2O14529 1486 aa37.88■■■■□ 3.65
CTTN-206ENST00000482755 PEG3Q9GZU2 1588 aa37.85■■■■□ 3.65
CTTN-206ENST00000482755 MROH2BQ7Z745 1585 aa37.78■■■■□ 3.64
CTTN-206ENST00000482755 NESP48681 1621 aa37.78■■■■□ 3.64
CTTN-206ENST00000482755 LAMC3Q9Y6N6 1575 aa37.47■■■■□ 3.59
CTTN-206ENST00000482755 THOC2Q8NI27 1593 aaKnown RBP37.34■■■■□ 3.57
CTTN-206ENST00000482755 PDS5BQ9NTI5 1447 aa37.31■■■■□ 3.56
CTTN-206ENST00000482755 CADPSQ9ULU8 1353 aa37.26■■■■□ 3.55
CTTN-206ENST00000482755 WIZO95785 1651 aa37.25■■■■□ 3.55
CTTN-206ENST00000482755 KIF21AQ7Z4S6 1674 aa37.17■■■■□ 3.54
CTTN-206ENST00000482755 RSF1Q96T23 1441 aaPredicted RBP37.04■■■■□ 3.52
CTTN-206ENST00000482755 MRC2Q9UBG0 1479 aa36.97■■■■□ 3.51
CTTN-206ENST00000482755 WDR62O43379 1518 aa36.86■■■■□ 3.49
CTTN-206ENST00000482755 CFTRP13569 1480 aa36.82■■■■□ 3.49
CTTN-206ENST00000482755 CEP164Q9UPV0 1460 aa36.82■■■■□ 3.49
CTTN-206ENST00000482755 TOP2AP11388 1531 aaKnown RBP36.82■■■■□ 3.48
CTTN-206ENST00000482755 FANCD2Q9BXW9 1451 aa36.81■■■■□ 3.48
CTTN-206ENST00000482755 URB2Q14146 1524 aaKnown RBP36.5■■■■□ 3.43
CTTN-206ENST00000482755 CCDC88BA6NC98 1476 aa36.45■■■■□ 3.43
CTTN-206ENST00000482755 PRDM2Q13029 1718 aa36.22■■■■□ 3.39
CTTN-206ENST00000482755 TRIM41Q8WV44 630 aa36.22■■■■□ 3.39
CTTN-206ENST00000482755 OSCARQ8IYS5 282 aa36.2■■■■□ 3.39
CTTN-206ENST00000482755 IFT140Q96RY7 1462 aa36.11■■■■□ 3.37
CTTN-206ENST00000482755 TOPBP1Q92547 1522 aa36.09■■■■□ 3.37
CTTN-206ENST00000482755 ZNF608Q9ULD9 1512 aaPredicted RBP36.06■■■■□ 3.36
CTTN-206ENST00000482755 ABCC8Q09428 1581 aa36.01■■■■□ 3.35
CTTN-206ENST00000482755 DNMBPQ6XZF7 1577 aa35.93■■■■□ 3.34
CTTN-206ENST00000482755 EIF4G3O43432 1585 aaKnown RBP35.78■■■■□ 3.32
CTTN-206ENST00000482755 TARBP1Q13395 1621 aaKnown RBP35.75■■■■□ 3.31
CTTN-206ENST00000482755 AQRO60306 1485 aaKnown RBP eCLIP35.74■■■■□ 3.311e-8■■■■□ 24.7
CTTN-206ENST00000482755 POLA1P09884 1462 aaPredicted RBP35.74■■■■□ 3.31
CTTN-206ENST00000482755 RIMBP3CA6NJZ7 1639 aa35.63■■■■□ 3.29
CTTN-206ENST00000482755 RIMBP3BA6NNM3 1639 aa35.63■■■■□ 3.29
CTTN-206ENST00000482755 RIMBP3Q9UFD9 1639 aa35.63■■■■□ 3.29
CTTN-206ENST00000482755 RAD54L2Q9Y4B4 1467 aa35.62■■■■□ 3.29
CTTN-206ENST00000482755 SOGA1O94964 1423 aa35.59■■■■□ 3.29
CTTN-206ENST00000482755 ARHGEF11O15085 1522 aa35.57■■■■□ 3.29
CTTN-206ENST00000482755 TDRD9Q8NDG6 1382 aaKnown RBP35.54■■■■□ 3.28
CTTN-206ENST00000482755 FGD5Q6ZNL6 1462 aa35.51■■■■□ 3.28
CTTN-206ENST00000482755 FBLN2P98095 1184 aa35.5■■■■□ 3.27
CTTN-206ENST00000482755 CUX1P39880 1505 aa35.48■■■■□ 3.27
CTTN-206ENST00000482755 CHD1O14646 1710 aa35.43■■■■□ 3.26
CTTN-206ENST00000482755 SUPT5HO00267 1087 aaKnown RBP35.4■■■■□ 3.26
CTTN-206ENST00000482755 CYB5RLQ6IPT4 315 aa35.36■■■■□ 3.25
CTTN-206ENST00000482755 WDR97A6NE52 1622 aa35.35■■■■□ 3.25
CTTN-206ENST00000482755 SNAPC4Q5SXM2 1469 aa35.35■■■■□ 3.25
CTTN-206ENST00000482755 GRIN2BQ13224 1484 aa35.27■■■■□ 3.24
CTTN-206ENST00000482755 MAGI1Q96QZ7 1491 aaPredicted RBP35.25■■■■□ 3.23
CTTN-206ENST00000482755 CHMP7Q8WUX9 453 aaPredicted RBP35.25■■■■□ 3.23
CTTN-206ENST00000482755 ARAP1Q96P48 1450 aa35.24■■■■□ 3.23
CTTN-206ENST00000482755 CLASP1Q7Z460 1538 aa35.15■■■■□ 3.22
CTTN-206ENST00000482755 SYNJ2O15056 1496 aa35.15■■■■□ 3.22
CTTN-206ENST00000482755 GAPVD1Q14C86 1478 aa35.15■■■■□ 3.22
CTTN-206ENST00000482755 ABCA10Q8WWZ4 1543 aa35.11■■■■□ 3.21
CTTN-206ENST00000482755 SYNJ1O43426 1573 aa35.09■■■■□ 3.21
CTTN-206ENST00000482755 ABCA5Q8WWZ7 1642 aa35.01■■■■□ 3.19
CTTN-206ENST00000482755 WRNQ14191 1432 aaPredicted RBP eCLIP34.99■■■■□ 3.19
CTTN-206ENST00000482755 PBRM1Q86U86 1689 aa34.99■■■■□ 3.19
CTTN-206ENST00000482755 TRHP20396 242 aaPredicted RBP34.93■■■■□ 3.18
CTTN-206ENST00000482755 TOP2BQ02880 1626 aa34.88■■■■□ 3.17
CTTN-206ENST00000482755 BIVM-ERCC5R4GMW8 1640 aa34.84■■■■□ 3.17
CTTN-206ENST00000482755 GRIN2AQ12879 1464 aa34.81■■■■□ 3.16
CTTN-206ENST00000482755 ADAMTS12P58397 1594 aa34.74■■■■□ 3.15
CTTN-206ENST00000482755 NUP160Q12769 1436 aa34.72■■■■□ 3.15
CTTN-206ENST00000482755 FHAD1B1AJZ9 1412 aa34.72■■■■□ 3.15
CTTN-206ENST00000482755 CEP170Q5SW79 1584 aa34.66■■■■□ 3.14
CTTN-206ENST00000482755 ERICH3Q5RHP9 1530 aa34.65■■■■□ 3.14
CTTN-206ENST00000482755 ERCC6L2Q5T890 1561 aa34.61■■■■□ 3.13
CTTN-206ENST00000482755 SHROOM2Q13796 1616 aa34.48■■■■□ 3.11
CTTN-206ENST00000482755 JPH4Q96JJ6 628 aa34.39■■■■□ 3.1
CTTN-206ENST00000482755 PRG4Q92954 1404 aaPredicted RBP34.38■■■■□ 3.09
CTTN-206ENST00000482755 IGF1RP08069 1367 aa34.29■■■■□ 3.08
CTTN-206ENST00000482755 KIF27Q86VH2 1401 aa34.26■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 191.7 ms