RNA–Protein interactions for RNA: ENST00000558921.1

KLF13-206, Transcript of Kruppel like factor 13, humanhuman

TSL 3

Gene KLF13, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF13-206ENST00000558921 NISCHQ9Y2I1 1504 aa64.95■■■■■ 7.99
KLF13-206ENST00000558921 CCDC180Q9P1Z9 1646 aa57.97■■■■■ 6.87
KLF13-206ENST00000558921 ABCC9O60706 1549 aa57■■■■■ 6.72
KLF13-206ENST00000558921 RB1CC1Q8TDY2 1594 aa54.76■■■■■ 6.36
KLF13-206ENST00000558921 NACADO15069 1562 aa54.6■■■■■ 6.33
KLF13-206ENST00000558921 DCAF8L2P0C7V8 631 aa54.36■■■■■ 6.29
KLF13-206ENST00000558921 MYO15BQ96JP2 1530 aa54.19■■■■■ 6.27
KLF13-206ENST00000558921 ZCCHC6Q5VYS8 1495 aaKnown RBP54.02■■■■■ 6.24
KLF13-206ENST00000558921 DCAF1Q9Y4B6 1507 aa53.79■■■■■ 6.2
KLF13-206ENST00000558921 UNC13AQ9UPW8 1703 aa53.42■■■■■ 6.14
KLF13-206ENST00000558921 PABPN1Q86U42 306 aaKnown RBP eCLIP53.17■■■■■ 6.1
KLF13-206ENST00000558921 BICRAQ9NZM4 1560 aa53.03■■■■■ 6.08
KLF13-206ENST00000558921 SCRIBQ14160 1630 aa52.75■■■■■ 6.03
KLF13-206ENST00000558921 DNAJC5BQ9UF47 199 aa52.64■■■■■ 6.02
KLF13-206ENST00000558921 SHROOM4Q9ULL8 1493 aa52.6■■■■■ 6.01
KLF13-206ENST00000558921 EIF4G1Q04637 1599 aaKnown RBP51.7■■■■■ 5.87
KLF13-206ENST00000558921 CC2D2AQ9P2K1 1620 aa51.57■■■■■ 5.85
KLF13-206ENST00000558921 CECR2Q9BXF3 1484 aa51.31■■■■■ 5.8
KLF13-206ENST00000558921 SMARCA4P51532 1647 aa50.47■■■■■ 5.67
KLF13-206ENST00000558921 BAZ1AQ9NRL2 1556 aaPredicted RBP50.4■■■■■ 5.66
KLF13-206ENST00000558921 NCAPD3P42695 1498 aa50.38■■■■■ 5.66
KLF13-206ENST00000558921 ATAD2BQ9ULI0 1458 aa50.31■■■■■ 5.64
KLF13-206ENST00000558921 SMARCA2P51531 1590 aa50.28■■■■■ 5.64
KLF13-206ENST00000558921 HMGXB3Q12766 1538 aa50.1■■■■■ 5.61
KLF13-206ENST00000558921 PEG3Q9GZU2 1588 aa50.03■■■■■ 5.6
KLF13-206ENST00000558921 MROH2BQ7Z745 1585 aa50■■■■■ 5.59
KLF13-206ENST00000558921 BAZ1BQ9UIG0 1483 aaKnown RBP49.88■■■■■ 5.57
KLF13-206ENST00000558921 WIZO95785 1651 aa49.42■■■■■ 5.5
KLF13-206ENST00000558921 RSF1Q96T23 1441 aaPredicted RBP49.31■■■■■ 5.48
KLF13-206ENST00000558921 ERCC6Q03468 1493 aa49.22■■■■■ 5.47
KLF13-206ENST00000558921 NESP48681 1621 aa49.18■■■■■ 5.46
KLF13-206ENST00000558921 LAMC3Q9Y6N6 1575 aa49.12■■■■■ 5.45
KLF13-206ENST00000558921 TOP2AP11388 1531 aaKnown RBP48.94■■■■■ 5.43
KLF13-206ENST00000558921 CUX2O14529 1486 aa48.89■■■■■ 5.42
KLF13-206ENST00000558921 CADPSQ9ULU8 1353 aa48.88■■■■■ 5.41
KLF13-206ENST00000558921 PDS5BQ9NTI5 1447 aa48.82■■■■■ 5.41
KLF13-206ENST00000558921 KIF21AQ7Z4S6 1674 aa48.62■■■■■ 5.37
KLF13-206ENST00000558921 THOC2Q8NI27 1593 aaKnown RBP48.58■■■■■ 5.37
KLF13-206ENST00000558921 CFTRP13569 1480 aa48.5■■■■■ 5.35
KLF13-206ENST00000558921 CCDC88BA6NC98 1476 aa48.34■■■■■ 5.33
KLF13-206ENST00000558921 MRC2Q9UBG0 1479 aa48.3■■■■■ 5.32
KLF13-206ENST00000558921 FANCD2Q9BXW9 1451 aa48.29■■■■■ 5.32
KLF13-206ENST00000558921 CEP164Q9UPV0 1460 aa48.29■■■■■ 5.32
KLF13-206ENST00000558921 WDR62O43379 1518 aa48.15■■■■■ 5.3
KLF13-206ENST00000558921 PRDM2Q13029 1718 aa48.1■■■■■ 5.29
KLF13-206ENST00000558921 DNAJC5Q9H3Z4 198 aa47.84■■■■■ 5.25
KLF13-206ENST00000558921 URB2Q14146 1524 aaKnown RBP47.81■■■■■ 5.24
KLF13-206ENST00000558921 SUPT5HO00267 1087 aaKnown RBP47.7■■■■■ 5.23
KLF13-206ENST00000558921 ABCC8Q09428 1581 aa47.54■■■■■ 5.2
KLF13-206ENST00000558921 TOPBP1Q92547 1522 aa47.47■■■■■ 5.19
KLF13-206ENST00000558921 DNMBPQ6XZF7 1577 aa47.4■■■■■ 5.18
KLF13-206ENST00000558921 IFT140Q96RY7 1462 aa47.32■■■■■ 5.17
KLF13-206ENST00000558921 ZNF608Q9ULD9 1512 aaPredicted RBP47.05■■■■■ 5.12
KLF13-206ENST00000558921 POLA1P09884 1462 aaPredicted RBP47.03■■■■■ 5.12
KLF13-206ENST00000558921 TARBP1Q13395 1621 aaKnown RBP46.97■■■■■ 5.11
KLF13-206ENST00000558921 CUX1P39880 1505 aa46.94■■■■■ 5.1
KLF13-206ENST00000558921 EIF4G3O43432 1585 aaKnown RBP46.87■■■■■ 5.09
KLF13-206ENST00000558921 FGD5Q6ZNL6 1462 aa46.86■■■■■ 5.09
KLF13-206ENST00000558921 SOGA1O94964 1423 aa46.86■■■■■ 5.09
KLF13-206ENST00000558921 RAD54L2Q9Y4B4 1467 aa46.79■■■■■ 5.08
KLF13-206ENST00000558921 OSCARQ8IYS5 282 aa46.78■■■■■ 5.08
KLF13-206ENST00000558921 AQRO60306 1485 aaKnown RBP eCLIP46.75■■■■■ 5.07
KLF13-206ENST00000558921 WDR97A6NE52 1622 aa46.69■■■■■ 5.07
KLF13-206ENST00000558921 TDRD9Q8NDG6 1382 aaKnown RBP46.6■■■■■ 5.05
KLF13-206ENST00000558921 WRNQ14191 1432 aaPredicted RBP eCLIP46.53■■■■■ 5.04
KLF13-206ENST00000558921 TOP2BQ02880 1626 aa46.46■■■■■ 5.03
KLF13-206ENST00000558921 BIVM-ERCC5R4GMW8 1640 aa46.46■■■■■ 5.03
KLF13-206ENST00000558921 ABCA10Q8WWZ4 1543 aa46.43■■■■■ 5.02
KLF13-206ENST00000558921 GRIN2BQ13224 1484 aa46.38■■■■■ 5.02
KLF13-206ENST00000558921 SYNJ1O43426 1573 aa46.38■■■■■ 5.01
KLF13-206ENST00000558921 CHD1O14646 1710 aa46.35■■■■■ 5.01
KLF13-206ENST00000558921 SNAPC4Q5SXM2 1469 aa46.31■■■■■ 5
KLF13-206ENST00000558921 MAGI1Q96QZ7 1491 aaPredicted RBP46.31■■■■■ 5
KLF13-206ENST00000558921 GAPVD1Q14C86 1478 aa46.31■■■■■ 5
KLF13-206ENST00000558921 FBLN2P98095 1184 aa46.27■■■■■ 5
KLF13-206ENST00000558921 ABCA5Q8WWZ7 1642 aa46.25■■■■■ 4.99
KLF13-206ENST00000558921 PBRM1Q86U86 1689 aa46.2■■■■■ 4.99
KLF13-206ENST00000558921 CHMP7Q8WUX9 453 aaPredicted RBP46.14■■■■■ 4.98
KLF13-206ENST00000558921 SYNJ2O15056 1496 aa46.12■■■■■ 4.97
KLF13-206ENST00000558921 RIMBP3CA6NJZ7 1639 aa46.02■■■■■ 4.96
KLF13-206ENST00000558921 RIMBP3BA6NNM3 1639 aa46.02■■■■■ 4.96
KLF13-206ENST00000558921 RIMBP3Q9UFD9 1639 aa46.02■■■■■ 4.96
KLF13-206ENST00000558921 TRIM41Q8WV44 630 aa46.01■■■■■ 4.96
KLF13-206ENST00000558921 ARHGEF11O15085 1522 aa45.98■■■■■ 4.95
KLF13-206ENST00000558921 ERICH3Q5RHP9 1530 aa45.88■■■■■ 4.94
KLF13-206ENST00000558921 CLASP1Q7Z460 1538 aa45.87■■■■■ 4.93
KLF13-206ENST00000558921 ADAMTS12P58397 1594 aa45.84■■■■■ 4.93
KLF13-206ENST00000558921 FHAD1B1AJZ9 1412 aa45.78■■■■■ 4.92
KLF13-206ENST00000558921 GRIN2AQ12879 1464 aa45.75■■■■■ 4.91
KLF13-206ENST00000558921 KIF27Q86VH2 1401 aa45.61■■■■■ 4.89
KLF13-206ENST00000558921 NUP160Q12769 1436 aa45.59■■■■■ 4.89
KLF13-206ENST00000558921 ARAP1Q96P48 1450 aa45.57■■■■■ 4.89
KLF13-206ENST00000558921 CYB5RLQ6IPT4 315 aa45.56■■■■■ 4.88
KLF13-206ENST00000558921 CEP170Q5SW79 1584 aa45.51■■■■■ 4.88
KLF13-206ENST00000558921 IGF1RP08069 1367 aa45.44■■■■■ 4.86
KLF13-206ENST00000558921 CUL7Q14999 1698 aa45.38■■■■■ 4.86
KLF13-206ENST00000558921 SHROOM2Q13796 1616 aa45.28■■■■■ 4.84
KLF13-206ENST00000558921 CARMIL1Q5VZK9 1371 aa45.18■■■■■ 4.82
KLF13-206ENST00000558921 RUSC2Q8N2Y8 1516 aa45.16■■■■■ 4.82
KLF13-206ENST00000558921 ERCC6L2Q5T890 1561 aa45.13■■■■■ 4.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms