RNA–Protein interactions for RNA: ENST00000409649.5

IMP4-202, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 822 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-202ENST00000409649 NISCHQ9Y2I1 1504 aa39.27■■■■□ 3.88
IMP4-202ENST00000409649 CCDC180Q9P1Z9 1646 aa34.67■■■■□ 3.14
IMP4-202ENST00000409649 ABCC9O60706 1549 aa33.33■■■□□ 2.93
IMP4-202ENST00000409649 ZCCHC6Q5VYS8 1495 aaKnown RBP32.82■■■□□ 2.84
IMP4-202ENST00000409649 DCAF1Q9Y4B6 1507 aa32.59■■■□□ 2.81
IMP4-202ENST00000409649 DCAF8L2P0C7V8 631 aa32.58■■■□□ 2.81
IMP4-202ENST00000409649 MYO15BQ96JP2 1530 aa32.56■■■□□ 2.8
IMP4-202ENST00000409649 NACADO15069 1562 aa32.52■■■□□ 2.8
IMP4-202ENST00000409649 RB1CC1Q8TDY2 1594 aa32.41■■■□□ 2.78
IMP4-202ENST00000409649 SCRIBQ14160 1630 aa31.6■■■□□ 2.65
IMP4-202ENST00000409649 UNC13AQ9UPW8 1703 aa31.47■■■□□ 2.63
IMP4-202ENST00000409649 BICRAQ9NZM4 1560 aa31.28■■■□□ 2.6
IMP4-202ENST00000409649 SHROOM4Q9ULL8 1493 aa31.26■■■□□ 2.59
IMP4-202ENST00000409649 PABPN1Q86U42 306 aaKnown RBP eCLIP31.24■■■□□ 2.59
IMP4-202ENST00000409649 EIF4G1Q04637 1599 aaKnown RBP30.47■■■□□ 2.47
IMP4-202ENST00000409649 CECR2Q9BXF3 1484 aa30.44■■■□□ 2.46
IMP4-202ENST00000409649 BAZ1AQ9NRL2 1556 aaPredicted RBP30.44■■■□□ 2.46
IMP4-202ENST00000409649 SMARCA4P51532 1647 aa30.32■■■□□ 2.44
IMP4-202ENST00000409649 MROH2BQ7Z745 1585 aa30.21■■■□□ 2.43
IMP4-202ENST00000409649 CC2D2AQ9P2K1 1620 aa30.18■■■□□ 2.42
IMP4-202ENST00000409649 RSF1Q96T23 1441 aaPredicted RBP30.12■■■□□ 2.41
IMP4-202ENST00000409649 SMARCA2P51531 1590 aa30.1■■■□□ 2.41
IMP4-202ENST00000409649 PEG3Q9GZU2 1588 aa30.07■■■□□ 2.4
IMP4-202ENST00000409649 ATAD2BQ9ULI0 1458 aa30.05■■■□□ 2.4
IMP4-202ENST00000409649 DNAJC5BQ9UF47 199 aa30.03■■■□□ 2.4
IMP4-202ENST00000409649 NCAPD3P42695 1498 aa29.99■■■□□ 2.39
IMP4-202ENST00000409649 HMGXB3Q12766 1538 aa29.88■■■□□ 2.37
IMP4-202ENST00000409649 WIZO95785 1651 aa29.88■■■□□ 2.37
IMP4-202ENST00000409649 BAZ1BQ9UIG0 1483 aaKnown RBP29.86■■■□□ 2.37
IMP4-202ENST00000409649 SUPT5HO00267 1087 aaKnown RBP29.75■■■□□ 2.35
IMP4-202ENST00000409649 TOP2AP11388 1531 aaKnown RBP29.7■■■□□ 2.34
IMP4-202ENST00000409649 CCDC88BA6NC98 1476 aa29.31■■■□□ 2.28
IMP4-202ENST00000409649 CADPSQ9ULU8 1353 aa29.15■■■□□ 2.26
IMP4-202ENST00000409649 LAMC3Q9Y6N6 1575 aa29.1■■■□□ 2.25
IMP4-202ENST00000409649 CFTRP13569 1480 aa29.07■■■□□ 2.24
IMP4-202ENST00000409649 NESP48681 1621 aa28.96■■■□□ 2.23
IMP4-202ENST00000409649 PDS5BQ9NTI5 1447 aa28.94■■■□□ 2.22
IMP4-202ENST00000409649 PRDM2Q13029 1718 aa28.82■■■□□ 2.2
IMP4-202ENST00000409649 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
IMP4-202ENST00000409649 ERCC6Q03468 1493 aa28.78■■■□□ 2.2
IMP4-202ENST00000409649 CEP164Q9UPV0 1460 aa28.72■■■□□ 2.19
IMP4-202ENST00000409649 KIF21AQ7Z4S6 1674 aa28.62■■■□□ 2.17
IMP4-202ENST00000409649 MRC2Q9UBG0 1479 aa28.55■■■□□ 2.16
IMP4-202ENST00000409649 ABCC8Q09428 1581 aa28.53■■■□□ 2.16
IMP4-202ENST00000409649 THOC2Q8NI27 1593 aaKnown RBP28.44■■■□□ 2.14
IMP4-202ENST00000409649 WDR62O43379 1518 aa28.42■■■□□ 2.14
IMP4-202ENST00000409649 WRNQ14191 1432 aaPredicted RBP eCLIP28.42■■■□□ 2.14
IMP4-202ENST00000409649 URB2Q14146 1524 aaKnown RBP28.4■■■□□ 2.14
IMP4-202ENST00000409649 DNMBPQ6XZF7 1577 aa28.4■■■□□ 2.14
IMP4-202ENST00000409649 TOPBP1Q92547 1522 aa28.37■■■□□ 2.13
IMP4-202ENST00000409649 CUX1P39880 1505 aa28.32■■■□□ 2.12
IMP4-202ENST00000409649 CUX2O14529 1486 aa28.3■■■□□ 2.12
IMP4-202ENST00000409649 TOP2BQ02880 1626 aa28.26■■■□□ 2.11
IMP4-202ENST00000409649 BIVM-ERCC5R4GMW8 1640 aa28.23■■■□□ 2.11
IMP4-202ENST00000409649 SYNJ1O43426 1573 aa28.21■■■□□ 2.11
IMP4-202ENST00000409649 FGD5Q6ZNL6 1462 aa28.16■■■□□ 2.1
IMP4-202ENST00000409649 TRIM41Q8WV44 630 aa28.16■■■□□ 2.1
IMP4-202ENST00000409649 POLA1P09884 1462 aaPredicted RBP28.15■■■□□ 2.1
IMP4-202ENST00000409649 IFT140Q96RY7 1462 aa28.11■■■□□ 2.09
IMP4-202ENST00000409649 CHIC1Q5VXU3 224 aa28.1■■■□□ 2.09
IMP4-202ENST00000409649 SOGA1O94964 1423 aa28.09■■■□□ 2.09
IMP4-202ENST00000409649 RAD54L2Q9Y4B4 1467 aa27.98■■■□□ 2.07
IMP4-202ENST00000409649 TARBP1Q13395 1621 aaKnown RBP27.97■■■□□ 2.07
IMP4-202ENST00000409649 ABCA10Q8WWZ4 1543 aa27.96■■■□□ 2.07
IMP4-202ENST00000409649 WDR97A6NE52 1622 aa27.92■■■□□ 2.06
IMP4-202ENST00000409649 KIF27Q86VH2 1401 aa27.83■■■□□ 2.05
IMP4-202ENST00000409649 TDRD9Q8NDG6 1382 aaKnown RBP27.82■■■□□ 2.04
IMP4-202ENST00000409649 ZNF608Q9ULD9 1512 aaPredicted RBP27.82■■■□□ 2.04
IMP4-202ENST00000409649 GAPVD1Q14C86 1478 aa27.77■■■□□ 2.04
IMP4-202ENST00000409649 EIF4G3O43432 1585 aaKnown RBP27.76■■■□□ 2.03
IMP4-202ENST00000409649 AQRO60306 1485 aaKnown RBP eCLIP27.76■■■□□ 2.035e-7■■■■■ 37.2
IMP4-202ENST00000409649 ABCA5Q8WWZ7 1642 aa27.74■■■□□ 2.03
IMP4-202ENST00000409649 GRIN2BQ13224 1484 aa27.72■■■□□ 2.03
IMP4-202ENST00000409649 EEA1Q15075 1411 aa27.72■■■□□ 2.03
IMP4-202ENST00000409649 ERICH3Q5RHP9 1530 aa27.66■■■□□ 2.02
IMP4-202ENST00000409649 MAGI1Q96QZ7 1491 aaPredicted RBP27.6■■■□□ 2.01
IMP4-202ENST00000409649 IGF1RP08069 1367 aa27.59■■■□□ 2.01
IMP4-202ENST00000409649 PBRM1Q86U86 1689 aa27.59■■■□□ 2.01
IMP4-202ENST00000409649 RUSC2Q8N2Y8 1516 aa27.57■■■□□ 2
IMP4-202ENST00000409649 SNAPC4Q5SXM2 1469 aa27.54■■■□□ 2
IMP4-202ENST00000409649 CSRNP3Q8WYN3 585 aa27.53■■■□□ 2
IMP4-202ENST00000409649 FHAD1B1AJZ9 1412 aa27.5■■□□□ 1.99
IMP4-202ENST00000409649 CUL7Q14999 1698 aa27.49■■□□□ 1.99
IMP4-202ENST00000409649 SYNJ2O15056 1496 aa27.46■■□□□ 1.99
IMP4-202ENST00000409649 CARMIL1Q5VZK9 1371 aa27.46■■□□□ 1.99
IMP4-202ENST00000409649 FAM9AQ8IZU1 332 aaPredicted RBP27.45■■□□□ 1.98
IMP4-202ENST00000409649 ADAMTS12P58397 1594 aa27.44■■□□□ 1.98
IMP4-202ENST00000409649 CHMP7Q8WUX9 453 aaPredicted RBP27.44■■□□□ 1.98
IMP4-202ENST00000409649 FBLN2P98095 1184 aa27.38■■□□□ 1.97
IMP4-202ENST00000409649 PRXQ9BXM0 1461 aa27.38■■□□□ 1.97
IMP4-202ENST00000409649 RAPGEF2Q9Y4G8 1499 aa27.37■■□□□ 1.97
IMP4-202ENST00000409649 GRIN2AQ12879 1464 aa27.33■■□□□ 1.97
IMP4-202ENST00000409649 KIF21BO75037 1637 aa27.27■■□□□ 1.96
IMP4-202ENST00000409649 CHD1O14646 1710 aa27.24■■□□□ 1.95
IMP4-202ENST00000409649 OSCARQ8IYS5 282 aa27.24■■□□□ 1.95
IMP4-202ENST00000409649 GOLGA3Q08378 1498 aa27.19■■□□□ 1.94
IMP4-202ENST00000409649 NUP160Q12769 1436 aa27.19■■□□□ 1.94
IMP4-202ENST00000409649 CEP170Q5SW79 1584 aa27.1■■□□□ 1.93
IMP4-202ENST00000409649 KIAA0586Q9BVV6 1533 aa27.1■■□□□ 1.93
IMP4-202ENST00000409649 UBTFP17480 764 aaKnown RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms