RNA–Protein interactions for RNA: ENST00000463233.1

TRABD-205, Transcript of TraB domain containing, humanhuman

TSL 1 (best)

Gene TRABD, Length 2,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-205ENST00000463233 NISCHQ9Y2I1 1504 aa43.76■■■■■ 4.6
TRABD-205ENST00000463233 CCDC180Q9P1Z9 1646 aa37.53■■■■□ 3.6
TRABD-205ENST00000463233 ZCCHC6Q5VYS8 1495 aaKnown RBP36.95■■■■□ 3.51
TRABD-205ENST00000463233 SHROOM4Q9ULL8 1493 aa36.78■■■■□ 3.48
TRABD-205ENST00000463233 DCAF8L2P0C7V8 631 aa36.2■■■■□ 3.39
TRABD-205ENST00000463233 DCAF1Q9Y4B6 1507 aa35.97■■■■□ 3.35
TRABD-205ENST00000463233 SUPT5HO00267 1087 aaKnown RBP35.79■■■■□ 3.32
TRABD-205ENST00000463233 MYO15BQ96JP2 1530 aa35.13■■■■□ 3.21
TRABD-205ENST00000463233 ABCC9O60706 1549 aa35.07■■■■□ 3.2
TRABD-205ENST00000463233 SCRIBQ14160 1630 aa35■■■■□ 3.19
TRABD-205ENST00000463233 NACADO15069 1562 aa34.77■■■■□ 3.16
TRABD-205ENST00000463233 CHIC1Q5VXU3 224 aa34.62■■■■□ 3.13
TRABD-205ENST00000463233 RSF1Q96T23 1441 aaPredicted RBP34.41■■■■□ 3.1
TRABD-205ENST00000463233 RB1CC1Q8TDY2 1594 aa34.3■■■■□ 3.08
TRABD-205ENST00000463233 CECR2Q9BXF3 1484 aa34.15■■■■□ 3.06
TRABD-205ENST00000463233 MROH2BQ7Z745 1585 aa33.99■■■■□ 3.03
TRABD-205ENST00000463233 UNC13AQ9UPW8 1703 aa33.85■■■■□ 3.01
TRABD-205ENST00000463233 WIZO95785 1651 aa33.79■■■■□ 3
TRABD-205ENST00000463233 BAZ1AQ9NRL2 1556 aaPredicted RBP33.65■■■□□ 2.98
TRABD-205ENST00000463233 LOC105371045A0A1W2PR82 267 aa33.53■■■□□ 2.96
TRABD-205ENST00000463233 SMARCA4P51532 1647 aa33.46■■■□□ 2.95
TRABD-205ENST00000463233 BICRAQ9NZM4 1560 aa33.42■■■□□ 2.94
TRABD-205ENST00000463233 TRIM41Q8WV44 630 aa33.4■■■□□ 2.94
TRABD-205ENST00000463233 PABPN1Q86U42 306 aaKnown RBP eCLIP33.37■■■□□ 2.93
TRABD-205ENST00000463233 TOP2AP11388 1531 aaKnown RBP33.27■■■□□ 2.92
TRABD-205ENST00000463233 EIF4G1Q04637 1599 aaKnown RBP33.19■■■□□ 2.9
TRABD-205ENST00000463233 SMARCA2P51531 1590 aa33.08■■■□□ 2.89
TRABD-205ENST00000463233 CCDC88BA6NC98 1476 aa33.08■■■□□ 2.89
TRABD-205ENST00000463233 FAM9AQ8IZU1 332 aaPredicted RBP33.08■■■□□ 2.89
TRABD-205ENST00000463233 PCGF6Q9BYE7 350 aa32.93■■■□□ 2.86
TRABD-205ENST00000463233 PEG3Q9GZU2 1588 aa32.88■■■□□ 2.85
TRABD-205ENST00000463233 ABCC8Q09428 1581 aa32.82■■■□□ 2.84
TRABD-205ENST00000463233 EHMT2Q96KQ7 1210 aa32.76■■■□□ 2.84
TRABD-205ENST00000463233 ATAD2BQ9ULI0 1458 aa32.7■■■□□ 2.83
TRABD-205ENST00000463233 HRCP23327 699 aa32.61■■■□□ 2.81
TRABD-205ENST00000463233 BAZ1BQ9UIG0 1483 aaKnown RBP32.56■■■□□ 2.8
TRABD-205ENST00000463233 TRIM26Q12899 539 aaPredicted RBP32.47■■■□□ 2.79
TRABD-205ENST00000463233 SOGA1O94964 1423 aa32.38■■■□□ 2.77
TRABD-205ENST00000463233 WRNQ14191 1432 aaPredicted RBP eCLIP32.32■■■□□ 2.76
TRABD-205ENST00000463233 RUSC2Q8N2Y8 1516 aa32.27■■■□□ 2.76
TRABD-205ENST00000463233 SYNJ1O43426 1573 aa32.23■■■□□ 2.75
TRABD-205ENST00000463233 NCAPD3P42695 1498 aa32.15■■■□□ 2.74
TRABD-205ENST00000463233 HMGXB3Q12766 1538 aa32.15■■■□□ 2.74
TRABD-205ENST00000463233 EEA1Q15075 1411 aa32.14■■■□□ 2.74
TRABD-205ENST00000463233 CSRNP3Q8WYN3 585 aa32.1■■■□□ 2.73
TRABD-205ENST00000463233 PPARGC1BQ86YN6 1023 aaKnown RBP32.02■■■□□ 2.72
TRABD-205ENST00000463233 CEP162Q5TB80 1403 aa31.98■■■□□ 2.71
TRABD-205ENST00000463233 TNIKQ9UKE5 1360 aa31.98■■■□□ 2.71
TRABD-205ENST00000463233 GOLGA3Q08378 1498 aa31.9■■■□□ 2.7
TRABD-205ENST00000463233 TOP2BQ02880 1626 aa31.89■■■□□ 2.7
TRABD-205ENST00000463233 UBTFP17480 764 aaKnown RBP31.87■■■□□ 2.69
TRABD-205ENST00000463233 BIVM-ERCC5R4GMW8 1640 aa31.81■■■□□ 2.68
TRABD-205ENST00000463233 KIF21BO75037 1637 aa31.79■■■□□ 2.68
TRABD-205ENST00000463233 CEP164Q9UPV0 1460 aa31.78■■■□□ 2.68
TRABD-205ENST00000463233 CFTRP13569 1480 aa31.75■■■□□ 2.67
TRABD-205ENST00000463233 CUX1P39880 1505 aa31.69■■■□□ 2.66
TRABD-205ENST00000463233 CC2D2AQ9P2K1 1620 aa31.64■■■□□ 2.66
TRABD-205ENST00000463233 RAPGEF2Q9Y4G8 1499 aa31.64■■■□□ 2.66
TRABD-205ENST00000463233 TTBK1Q5TCY1 1321 aaPredicted RBP31.58■■■□□ 2.65
TRABD-205ENST00000463233 PRDM2Q13029 1718 aa31.56■■■□□ 2.64
TRABD-205ENST00000463233 CLIP1P30622 1438 aa31.49■■■□□ 2.63
TRABD-205ENST00000463233 ZEB1P37275 1124 aaPredicted RBP31.48■■■□□ 2.63
TRABD-205ENST00000463233 CADPSQ9ULU8 1353 aa31.47■■■□□ 2.63
TRABD-205ENST00000463233 PRXQ9BXM0 1461 aa31.41■■■□□ 2.62
TRABD-205ENST00000463233 ERICH3Q5RHP9 1530 aa31.36■■■□□ 2.61
TRABD-205ENST00000463233 KIF27Q86VH2 1401 aa31.35■■■□□ 2.61
TRABD-205ENST00000463233 RANGAP1P46060 587 aaPredicted RBP31.34■■■□□ 2.61
TRABD-205ENST00000463233 VPS8Q8N3P4 1428 aa31.31■■■□□ 2.6
TRABD-205ENST00000463233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.28■■■□□ 2.6
TRABD-205ENST00000463233 FGD5Q6ZNL6 1462 aa31.18■■■□□ 2.58
TRABD-205ENST00000463233 FANCD2Q9BXW9 1451 aa31.18■■■□□ 2.58
TRABD-205ENST00000463233 CUX2O14529 1486 aa31.17■■■□□ 2.58
TRABD-205ENST00000463233 CCER1Q8TC90 406 aaPredicted RBP31.13■■■□□ 2.57
TRABD-205ENST00000463233 NESP48681 1621 aa31.13■■■□□ 2.57
TRABD-205ENST00000463233 ARAP1Q96P48 1450 aa31.1■■■□□ 2.57
TRABD-205ENST00000463233 IGF1RP08069 1367 aa31.07■■■□□ 2.56
TRABD-205ENST00000463233 APLP2Q06481 763 aa31■■■□□ 2.55
TRABD-205ENST00000463233 DNMBPQ6XZF7 1577 aa30.98■■■□□ 2.55
TRABD-205ENST00000463233 TOPBP1Q92547 1522 aa30.94■■■□□ 2.54
TRABD-205ENST00000463233 DNAJC5BQ9UF47 199 aa30.93■■■□□ 2.54
TRABD-205ENST00000463233 ARHGAP35Q9NRY4 1499 aa30.92■■■□□ 2.54
TRABD-205ENST00000463233 RAD54L2Q9Y4B4 1467 aa30.91■■■□□ 2.54
TRABD-205ENST00000463233 CARMIL1Q5VZK9 1371 aa30.91■■■□□ 2.54
TRABD-205ENST00000463233 POLA1P09884 1462 aaPredicted RBP30.89■■■□□ 2.54
TRABD-205ENST00000463233 LAMC3Q9Y6N6 1575 aa30.88■■■□□ 2.53
TRABD-205ENST00000463233 HNRNPUL2Q1KMD3 747 aaKnown RBP30.85■■■□□ 2.53
TRABD-205ENST00000463233 ABCA10Q8WWZ4 1543 aa30.82■■■□□ 2.52
TRABD-205ENST00000463233 KANK4Q5T7N3 995 aaPredicted RBP30.79■■■□□ 2.52
TRABD-205ENST00000463233 URB2Q14146 1524 aaKnown RBP30.78■■■□□ 2.52
TRABD-205ENST00000463233 WDR97A6NE52 1622 aa30.66■■■□□ 2.5
TRABD-205ENST00000463233 PDS5BQ9NTI5 1447 aa30.64■■■□□ 2.5
TRABD-205ENST00000463233 KIF21AQ7Z4S6 1674 aa30.64■■■□□ 2.49
TRABD-205ENST00000463233 CUL7Q14999 1698 aa30.59■■■□□ 2.49
TRABD-205ENST00000463233 TDRD9Q8NDG6 1382 aaKnown RBP30.53■■■□□ 2.48
TRABD-205ENST00000463233 ABCA5Q8WWZ7 1642 aa30.52■■■□□ 2.48
TRABD-205ENST00000463233 RRBP1Q9P2E9 1410 aaKnown RBP30.51■■■□□ 2.48
TRABD-205ENST00000463233 TIAM1Q13009 1591 aa30.5■■■□□ 2.47
TRABD-205ENST00000463233 P3H3Q8IVL6 736 aa30.49■■■□□ 2.47
TRABD-205ENST00000463233 CTTNBP2Q8WZ74 1663 aa30.46■■■□□ 2.47
TRABD-205ENST00000463233 GAPVD1Q14C86 1478 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms