RNA–Protein interactions for RNA: ENST00000589421.1

C19orf25-208, Transcript of chromosome 19 open reading frame 25, humanhuman

TSL 2

Gene C19orf25, Length 492 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf25-208ENST00000589421 NISCHQ9Y2I1 1504 aa39.71■■■■□ 3.95
C19orf25-208ENST00000589421 CCDC180Q9P1Z9 1646 aa35.52■■■■□ 3.28
C19orf25-208ENST00000589421 ABCC9O60706 1549 aa35.27■■■■□ 3.24
C19orf25-208ENST00000589421 RB1CC1Q8TDY2 1594 aa33.67■■■□□ 2.98
C19orf25-208ENST00000589421 DCAF8L2P0C7V8 631 aa33.56■■■□□ 2.96
C19orf25-208ENST00000589421 NACADO15069 1562 aa33.47■■■□□ 2.95
C19orf25-208ENST00000589421 MYO15BQ96JP2 1530 aa33.03■■■□□ 2.88
C19orf25-208ENST00000589421 UNC13AQ9UPW8 1703 aa32.99■■■□□ 2.87
C19orf25-208ENST00000589421 ZCCHC6Q5VYS8 1495 aaKnown RBP32.98■■■□□ 2.87
C19orf25-208ENST00000589421 PABPN1Q86U42 306 aaKnown RBP eCLIP32.9■■■□□ 2.86
C19orf25-208ENST00000589421 DCAF1Q9Y4B6 1507 aa32.76■■■□□ 2.83
C19orf25-208ENST00000589421 DNAJC5BQ9UF47 199 aa32.72■■■□□ 2.83
C19orf25-208ENST00000589421 BICRAQ9NZM4 1560 aa32.65■■■□□ 2.82
C19orf25-208ENST00000589421 SCRIBQ14160 1630 aa32.48■■■□□ 2.79
C19orf25-208ENST00000589421 SHROOM4Q9ULL8 1493 aa32.16■■■□□ 2.74
C19orf25-208ENST00000589421 CC2D2AQ9P2K1 1620 aa31.85■■■□□ 2.69
C19orf25-208ENST00000589421 EIF4G1Q04637 1599 aaKnown RBP31.84■■■□□ 2.69
C19orf25-208ENST00000589421 CECR2Q9BXF3 1484 aa31.7■■■□□ 2.66
C19orf25-208ENST00000589421 SMARCA4P51532 1647 aa30.96■■■□□ 2.55
C19orf25-208ENST00000589421 NCAPD3P42695 1498 aa30.86■■■□□ 2.53
C19orf25-208ENST00000589421 ATAD2BQ9ULI0 1458 aa30.85■■■□□ 2.53
C19orf25-208ENST00000589421 BAZ1AQ9NRL2 1556 aaPredicted RBP30.83■■■□□ 2.53
C19orf25-208ENST00000589421 SMARCA2P51531 1590 aa30.81■■■□□ 2.52
C19orf25-208ENST00000589421 HMGXB3Q12766 1538 aa30.7■■■□□ 2.51
C19orf25-208ENST00000589421 MROH2BQ7Z745 1585 aa30.64■■■□□ 2.5
C19orf25-208ENST00000589421 BAZ1BQ9UIG0 1483 aaKnown RBP30.63■■■□□ 2.49
C19orf25-208ENST00000589421 PEG3Q9GZU2 1588 aa30.56■■■□□ 2.48
C19orf25-208ENST00000589421 ERCC6Q03468 1493 aa30.44■■■□□ 2.46
C19orf25-208ENST00000589421 NESP48681 1621 aa30.39■■■□□ 2.46
C19orf25-208ENST00000589421 WIZO95785 1651 aa30.35■■■□□ 2.45
C19orf25-208ENST00000589421 CUX2O14529 1486 aa30.18■■■□□ 2.42
C19orf25-208ENST00000589421 LAMC3Q9Y6N6 1575 aa30.17■■■□□ 2.42
C19orf25-208ENST00000589421 RSF1Q96T23 1441 aaPredicted RBP30.09■■■□□ 2.41
C19orf25-208ENST00000589421 KIF21AQ7Z4S6 1674 aa30.04■■■□□ 2.4
C19orf25-208ENST00000589421 PDS5BQ9NTI5 1447 aa29.98■■■□□ 2.39
C19orf25-208ENST00000589421 CADPSQ9ULU8 1353 aa29.98■■■□□ 2.39
C19orf25-208ENST00000589421 THOC2Q8NI27 1593 aaKnown RBP29.98■■■□□ 2.39
C19orf25-208ENST00000589421 TOP2AP11388 1531 aaKnown RBP29.93■■■□□ 2.38
C19orf25-208ENST00000589421 DNAJC5Q9H3Z4 198 aa29.78■■■□□ 2.36
C19orf25-208ENST00000589421 MRC2Q9UBG0 1479 aa29.73■■■□□ 2.35
C19orf25-208ENST00000589421 CFTRP13569 1480 aa29.68■■■□□ 2.34
C19orf25-208ENST00000589421 CEP164Q9UPV0 1460 aa29.68■■■□□ 2.34
C19orf25-208ENST00000589421 FANCD2Q9BXW9 1451 aa29.68■■■□□ 2.34
C19orf25-208ENST00000589421 WDR62O43379 1518 aa29.61■■■□□ 2.33
C19orf25-208ENST00000589421 CCDC88BA6NC98 1476 aa29.58■■■□□ 2.33
C19orf25-208ENST00000589421 PRDM2Q13029 1718 aa29.54■■■□□ 2.32
C19orf25-208ENST00000589421 URB2Q14146 1524 aaKnown RBP29.4■■■□□ 2.3
C19orf25-208ENST00000589421 SUPT5HO00267 1087 aaKnown RBP29.16■■■□□ 2.26
C19orf25-208ENST00000589421 TOPBP1Q92547 1522 aa29.15■■■□□ 2.26
C19orf25-208ENST00000589421 DNMBPQ6XZF7 1577 aa29.08■■■□□ 2.25
C19orf25-208ENST00000589421 ABCC8Q09428 1581 aa29.07■■■□□ 2.24
C19orf25-208ENST00000589421 IFT140Q96RY7 1462 aa29.05■■■□□ 2.24
C19orf25-208ENST00000589421 ZNF608Q9ULD9 1512 aaPredicted RBP29■■■□□ 2.23
C19orf25-208ENST00000589421 OSCARQ8IYS5 282 aa28.89■■■□□ 2.22
C19orf25-208ENST00000589421 EIF4G3O43432 1585 aaKnown RBP28.88■■■□□ 2.21
C19orf25-208ENST00000589421 POLA1P09884 1462 aaPredicted RBP28.86■■■□□ 2.21
C19orf25-208ENST00000589421 TARBP1Q13395 1621 aaKnown RBP28.85■■■□□ 2.21
C19orf25-208ENST00000589421 AQRO60306 1485 aaKnown RBP eCLIP28.79■■■□□ 2.23e-6■■■■□ 23.2
C19orf25-208ENST00000589421 RAD54L2Q9Y4B4 1467 aa28.79■■■□□ 2.2
C19orf25-208ENST00000589421 TRIM41Q8WV44 630 aa28.77■■■□□ 2.2
C19orf25-208ENST00000589421 CUX1P39880 1505 aa28.77■■■□□ 2.2
C19orf25-208ENST00000589421 FGD5Q6ZNL6 1462 aa28.76■■■□□ 2.19
C19orf25-208ENST00000589421 SOGA1O94964 1423 aa28.76■■■□□ 2.19
C19orf25-208ENST00000589421 TDRD9Q8NDG6 1382 aaKnown RBP28.68■■■□□ 2.18
C19orf25-208ENST00000589421 CHD1O14646 1710 aa28.67■■■□□ 2.18
C19orf25-208ENST00000589421 FBLN2P98095 1184 aa28.62■■■□□ 2.17
C19orf25-208ENST00000589421 WDR97A6NE52 1622 aa28.54■■■□□ 2.16
C19orf25-208ENST00000589421 RIMBP3CA6NJZ7 1639 aa28.53■■■□□ 2.16
C19orf25-208ENST00000589421 RIMBP3BA6NNM3 1639 aa28.53■■■□□ 2.16
C19orf25-208ENST00000589421 RIMBP3Q9UFD9 1639 aa28.53■■■□□ 2.16
C19orf25-208ENST00000589421 SNAPC4Q5SXM2 1469 aa28.52■■■□□ 2.16
C19orf25-208ENST00000589421 PBRM1Q86U86 1689 aa28.45■■■□□ 2.15
C19orf25-208ENST00000589421 GRIN2BQ13224 1484 aa28.45■■■□□ 2.14
C19orf25-208ENST00000589421 ARHGEF11O15085 1522 aa28.43■■■□□ 2.14
C19orf25-208ENST00000589421 WRNQ14191 1432 aaPredicted RBP eCLIP28.43■■■□□ 2.14
C19orf25-208ENST00000589421 GAPVD1Q14C86 1478 aa28.41■■■□□ 2.14
C19orf25-208ENST00000589421 BIVM-ERCC5R4GMW8 1640 aa28.41■■■□□ 2.14
C19orf25-208ENST00000589421 MAGI1Q96QZ7 1491 aaPredicted RBP28.4■■■□□ 2.14
C19orf25-208ENST00000589421 ABCA10Q8WWZ4 1543 aa28.4■■■□□ 2.14
C19orf25-208ENST00000589421 CHMP7Q8WUX9 453 aaPredicted RBP28.4■■■□□ 2.14
C19orf25-208ENST00000589421 SYNJ1O43426 1573 aa28.4■■■□□ 2.14
C19orf25-208ENST00000589421 TOP2BQ02880 1626 aa28.4■■■□□ 2.14
C19orf25-208ENST00000589421 ABCA5Q8WWZ7 1642 aa28.36■■■□□ 2.13
C19orf25-208ENST00000589421 SYNJ2O15056 1496 aa28.31■■■□□ 2.12
C19orf25-208ENST00000589421 CYB5RLQ6IPT4 315 aa28.24■■■□□ 2.11
C19orf25-208ENST00000589421 CLASP1Q7Z460 1538 aa28.23■■■□□ 2.11
C19orf25-208ENST00000589421 ARAP1Q96P48 1450 aa28.17■■■□□ 2.1
C19orf25-208ENST00000589421 ADAMTS12P58397 1594 aa28.15■■■□□ 2.1
C19orf25-208ENST00000589421 GRIN2AQ12879 1464 aa28.09■■■□□ 2.09
C19orf25-208ENST00000589421 ERICH3Q5RHP9 1530 aa28.05■■■□□ 2.08
C19orf25-208ENST00000589421 FHAD1B1AJZ9 1412 aa28.04■■■□□ 2.08
C19orf25-208ENST00000589421 CEP170Q5SW79 1584 aa27.99■■■□□ 2.07
C19orf25-208ENST00000589421 NUP160Q12769 1436 aa27.94■■■□□ 2.06
C19orf25-208ENST00000589421 TRHP20396 242 aaPredicted RBP27.88■■■□□ 2.05
C19orf25-208ENST00000589421 ERCC6L2Q5T890 1561 aa27.88■■■□□ 2.05
C19orf25-208ENST00000589421 KIF27Q86VH2 1401 aa27.85■■■□□ 2.05
C19orf25-208ENST00000589421 SHROOM2Q13796 1616 aa27.81■■■□□ 2.04
C19orf25-208ENST00000589421 IGF1RP08069 1367 aa27.76■■■□□ 2.03
C19orf25-208ENST00000589421 CUL7Q14999 1698 aa27.76■■■□□ 2.03
C19orf25-208ENST00000589421 RUSC2Q8N2Y8 1516 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms