RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 NISCHQ9Y2I1 1504 aa35.05■■■■□ 3.2
LINC01006-202ENST00000418309 CCDC180Q9P1Z9 1646 aa31.36■■■□□ 2.61
LINC01006-202ENST00000418309 ABCC9O60706 1549 aa31.34■■■□□ 2.61
LINC01006-202ENST00000418309 RB1CC1Q8TDY2 1594 aa29.85■■■□□ 2.37
LINC01006-202ENST00000418309 DCAF8L2P0C7V8 631 aa29.72■■■□□ 2.35
LINC01006-202ENST00000418309 NACADO15069 1562 aa29.65■■■□□ 2.34
LINC01006-202ENST00000418309 DNAJC5BQ9UF47 199 aa29.29■■■□□ 2.28
LINC01006-202ENST00000418309 PABPN1Q86U42 306 aaKnown RBP eCLIP29.24■■■□□ 2.27
LINC01006-202ENST00000418309 AEBP2Q6ZN18 517 aaPredicted RBP29.23■■■□□ 2.27
LINC01006-202ENST00000418309 MYO15BQ96JP2 1530 aa29.23■■■□□ 2.27
LINC01006-202ENST00000418309 UNC13AQ9UPW8 1703 aa29.15■■■□□ 2.26
LINC01006-202ENST00000418309 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
LINC01006-202ENST00000418309 BICRAQ9NZM4 1560 aa28.92■■■□□ 2.22
LINC01006-202ENST00000418309 DCAF1Q9Y4B6 1507 aa28.91■■■□□ 2.22
LINC01006-202ENST00000418309 SCRIBQ14160 1630 aa28.65■■■□□ 2.18
LINC01006-202ENST00000418309 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
LINC01006-202ENST00000418309 CC2D2AQ9P2K1 1620 aa28.28■■■□□ 2.12
LINC01006-202ENST00000418309 EIF4G1Q04637 1599 aaKnown RBP28.24■■■□□ 2.11
LINC01006-202ENST00000418309 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
LINC01006-202ENST00000418309 CHIC1Q5VXU3 224 aa27.78■■■□□ 2.04
LINC01006-202ENST00000418309 NCAPD3P42695 1498 aa27.38■■□□□ 1.97
LINC01006-202ENST00000418309 ATAD2BQ9ULI0 1458 aa27.32■■□□□ 1.96
LINC01006-202ENST00000418309 SMARCA4P51532 1647 aa27.31■■□□□ 1.96
LINC01006-202ENST00000418309 SMARCA2P51531 1590 aa27.26■■□□□ 1.95
LINC01006-202ENST00000418309 BAZ1AQ9NRL2 1556 aaPredicted RBP27.2■■□□□ 1.94
LINC01006-202ENST00000418309 HMGXB3Q12766 1538 aa27.16■■□□□ 1.94
LINC01006-202ENST00000418309 BAZ1BQ9UIG0 1483 aaKnown RBP27.08■■□□□ 1.93
LINC01006-202ENST00000418309 ERCC6Q03468 1493 aa27.07■■□□□ 1.92
LINC01006-202ENST00000418309 MROH2BQ7Z745 1585 aa27.01■■□□□ 1.92
LINC01006-202ENST00000418309 PEG3Q9GZU2 1588 aa27■■□□□ 1.91
LINC01006-202ENST00000418309 NESP48681 1621 aa26.94■■□□□ 1.9
LINC01006-202ENST00000418309 CUX2O14529 1486 aa26.92■■□□□ 1.9
LINC01006-202ENST00000418309 DNAJC5Q9H3Z4 198 aa26.82■■□□□ 1.88
LINC01006-202ENST00000418309 LAMC3Q9Y6N6 1575 aa26.74■■□□□ 1.87
LINC01006-202ENST00000418309 WIZO95785 1651 aa26.72■■□□□ 1.87
LINC01006-202ENST00000418309 PDS5BQ9NTI5 1447 aa26.63■■□□□ 1.85
LINC01006-202ENST00000418309 CADPSQ9ULU8 1353 aa26.58■■□□□ 1.85
LINC01006-202ENST00000418309 THOC2Q8NI27 1593 aaKnown RBP26.58■■□□□ 1.85
LINC01006-202ENST00000418309 KIF21AQ7Z4S6 1674 aa26.58■■□□□ 1.85
LINC01006-202ENST00000418309 RSF1Q96T23 1441 aaPredicted RBP26.5■■□□□ 1.83
LINC01006-202ENST00000418309 MRC2Q9UBG0 1479 aa26.36■■□□□ 1.81
LINC01006-202ENST00000418309 TOP2AP11388 1531 aaKnown RBP26.36■■□□□ 1.81
LINC01006-202ENST00000418309 CEP164Q9UPV0 1460 aa26.3■■□□□ 1.8
LINC01006-202ENST00000418309 FANCD2Q9BXW9 1451 aa26.28■■□□□ 1.8
LINC01006-202ENST00000418309 CFTRP13569 1480 aa26.27■■□□□ 1.8
LINC01006-202ENST00000418309 WDR62O43379 1518 aa26.26■■□□□ 1.79
LINC01006-202ENST00000418309 CCDC88BA6NC98 1476 aa26.09■■□□□ 1.77
LINC01006-202ENST00000418309 URB2Q14146 1524 aaKnown RBP26.03■■□□□ 1.76
LINC01006-202ENST00000418309 PRDM2Q13029 1718 aa26.01■■□□□ 1.75
LINC01006-202ENST00000418309 OSCARQ8IYS5 282 aa25.8■■□□□ 1.72
LINC01006-202ENST00000418309 TOPBP1Q92547 1522 aa25.78■■□□□ 1.72
LINC01006-202ENST00000418309 TRIM41Q8WV44 630 aa25.78■■□□□ 1.72
LINC01006-202ENST00000418309 IFT140Q96RY7 1462 aa25.75■■□□□ 1.71
LINC01006-202ENST00000418309 ABCC8Q09428 1581 aa25.74■■□□□ 1.71
LINC01006-202ENST00000418309 ZNF608Q9ULD9 1512 aaPredicted RBP25.7■■□□□ 1.7
LINC01006-202ENST00000418309 DNMBPQ6XZF7 1577 aa25.69■■□□□ 1.7
LINC01006-202ENST00000418309 SUPT5HO00267 1087 aaKnown RBP25.56■■□□□ 1.68
LINC01006-202ENST00000418309 EIF4G3O43432 1585 aaKnown RBP25.55■■□□□ 1.68
LINC01006-202ENST00000418309 AQRO60306 1485 aaKnown RBP eCLIP25.52■■□□□ 1.68
LINC01006-202ENST00000418309 POLA1P09884 1462 aaPredicted RBP25.52■■□□□ 1.68
LINC01006-202ENST00000418309 TARBP1Q13395 1621 aaKnown RBP25.52■■□□□ 1.68
LINC01006-202ENST00000418309 RAD54L2Q9Y4B4 1467 aa25.46■■□□□ 1.67
LINC01006-202ENST00000418309 SOGA1O94964 1423 aa25.46■■□□□ 1.67
LINC01006-202ENST00000418309 FBLN2P98095 1184 aa25.42■■□□□ 1.66
LINC01006-202ENST00000418309 TDRD9Q8NDG6 1382 aaKnown RBP25.4■■□□□ 1.66
LINC01006-202ENST00000418309 FGD5Q6ZNL6 1462 aa25.4■■□□□ 1.66
LINC01006-202ENST00000418309 CUX1P39880 1505 aa25.37■■□□□ 1.65
LINC01006-202ENST00000418309 RIMBP3CA6NJZ7 1639 aa25.37■■□□□ 1.65
LINC01006-202ENST00000418309 RIMBP3BA6NNM3 1639 aa25.37■■□□□ 1.65
LINC01006-202ENST00000418309 RIMBP3Q9UFD9 1639 aa25.37■■□□□ 1.65
LINC01006-202ENST00000418309 CHD1O14646 1710 aa25.36■■□□□ 1.65
LINC01006-202ENST00000418309 ARHGEF11O15085 1522 aa25.31■■□□□ 1.64
LINC01006-202ENST00000418309 WDR97A6NE52 1622 aa25.25■■□□□ 1.63
LINC01006-202ENST00000418309 SNAPC4Q5SXM2 1469 aa25.24■■□□□ 1.63
LINC01006-202ENST00000418309 CHMP7Q8WUX9 453 aaPredicted RBP25.22■■□□□ 1.63
LINC01006-202ENST00000418309 CYB5RLQ6IPT4 315 aa25.21■■□□□ 1.63
LINC01006-202ENST00000418309 GRIN2BQ13224 1484 aa25.19■■□□□ 1.62
LINC01006-202ENST00000418309 MAGI1Q96QZ7 1491 aaPredicted RBP25.16■■□□□ 1.62
LINC01006-202ENST00000418309 GAPVD1Q14C86 1478 aa25.13■■□□□ 1.61
LINC01006-202ENST00000418309 ABCA10Q8WWZ4 1543 aa25.09■■□□□ 1.61
LINC01006-202ENST00000418309 PBRM1Q86U86 1689 aa25.09■■□□□ 1.61
LINC01006-202ENST00000418309 SYNJ2O15056 1496 aa25.09■■□□□ 1.61
LINC01006-202ENST00000418309 SYNJ1O43426 1573 aa25.08■■□□□ 1.61
LINC01006-202ENST00000418309 WRNQ14191 1432 aaPredicted RBP eCLIP25.06■■□□□ 1.6
LINC01006-202ENST00000418309 ARAP1Q96P48 1450 aa25.06■■□□□ 1.6
LINC01006-202ENST00000418309 CLASP1Q7Z460 1538 aa25.02■■□□□ 1.6
LINC01006-202ENST00000418309 ABCA5Q8WWZ7 1642 aa25.02■■□□□ 1.6
LINC01006-202ENST00000418309 TOP2BQ02880 1626 aa24.99■■□□□ 1.59
LINC01006-202ENST00000418309 BIVM-ERCC5R4GMW8 1640 aa24.98■■□□□ 1.59
LINC01006-202ENST00000418309 TRHP20396 242 aaPredicted RBP24.93■■□□□ 1.58
LINC01006-202ENST00000418309 SENP3Q9H4L4 574 aaPredicted RBP24.9■■□□□ 1.58
LINC01006-202ENST00000418309 GRIN2AQ12879 1464 aa24.85■■□□□ 1.57
LINC01006-202ENST00000418309 ADAMTS12P58397 1594 aa24.83■■□□□ 1.57
LINC01006-202ENST00000418309 FHAD1B1AJZ9 1412 aa24.81■■□□□ 1.56
LINC01006-202ENST00000418309 ERICH3Q5RHP9 1530 aa24.78■■□□□ 1.56
LINC01006-202ENST00000418309 NUP160Q12769 1436 aa24.75■■□□□ 1.55
LINC01006-202ENST00000418309 CEP170Q5SW79 1584 aa24.75■■□□□ 1.55
LINC01006-202ENST00000418309 ERCC6L2Q5T890 1561 aa24.68■■□□□ 1.54
LINC01006-202ENST00000418309 SHROOM2Q13796 1616 aa24.61■■□□□ 1.53
LINC01006-202ENST00000418309 PHF23Q9BUL5 403 aaPredicted RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms