RNA–Protein interactions for RNA: ENST00000467105.1

RPL3-212, Transcript of ribosomal protein L3, humanhuman

TSL 1 (best)

Gene RPL3, Length 1,396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3-212ENST00000467105 NISCHQ9Y2I1 1504 aa35.58■■■■□ 3.29
RPL3-212ENST00000467105 ABCC9O60706 1549 aa32.04■■■□□ 2.72
RPL3-212ENST00000467105 CCDC180Q9P1Z9 1646 aa31.85■■■□□ 2.69
RPL3-212ENST00000467105 RB1CC1Q8TDY2 1594 aa30.39■■■□□ 2.45
RPL3-212ENST00000467105 DNAJC5BQ9UF47 199 aa30.19■■■□□ 2.42
RPL3-212ENST00000467105 NACADO15069 1562 aa30.18■■■□□ 2.42
RPL3-212ENST00000467105 DCAF8L2P0C7V8 631 aa30.15■■■□□ 2.42
RPL3-212ENST00000467105 PABPN1Q86U42 306 aaKnown RBP eCLIP29.89■■■□□ 2.37
RPL3-212ENST00000467105 MYO15BQ96JP2 1530 aa29.73■■■□□ 2.35
RPL3-212ENST00000467105 UNC13AQ9UPW8 1703 aa29.66■■■□□ 2.34
RPL3-212ENST00000467105 BICRAQ9NZM4 1560 aa29.55■■■□□ 2.32
RPL3-212ENST00000467105 ZCCHC6Q5VYS8 1495 aaKnown RBP29.46■■■□□ 2.31
RPL3-212ENST00000467105 DCAF1Q9Y4B6 1507 aa29.34■■■□□ 2.29
RPL3-212ENST00000467105 SCRIBQ14160 1630 aa29.09■■■□□ 2.25
RPL3-212ENST00000467105 SHROOM4Q9ULL8 1493 aa29.08■■■□□ 2.25
RPL3-212ENST00000467105 CC2D2AQ9P2K1 1620 aa28.89■■■□□ 2.22
RPL3-212ENST00000467105 CECR2Q9BXF3 1484 aa28.86■■■□□ 2.21
RPL3-212ENST00000467105 EIF4G1Q04637 1599 aaKnown RBP28.82■■■□□ 2.2
RPL3-212ENST00000467105 NCAPD3P42695 1498 aa27.91■■■□□ 2.06
RPL3-212ENST00000467105 ATAD2BQ9ULI0 1458 aa27.82■■■□□ 2.04
RPL3-212ENST00000467105 SMARCA4P51532 1647 aa27.73■■■□□ 2.03
RPL3-212ENST00000467105 DNAJC5Q9H3Z4 198 aa27.72■■■□□ 2.03
RPL3-212ENST00000467105 SMARCA2P51531 1590 aa27.68■■■□□ 2.02
RPL3-212ENST00000467105 HMGXB3Q12766 1538 aa27.64■■■□□ 2.01
RPL3-212ENST00000467105 ERCC6Q03468 1493 aa27.64■■■□□ 2.01
RPL3-212ENST00000467105 BAZ1AQ9NRL2 1556 aaPredicted RBP27.59■■■□□ 2.01
RPL3-212ENST00000467105 CUX2O14529 1486 aa27.57■■■□□ 2
RPL3-212ENST00000467105 BAZ1BQ9UIG0 1483 aaKnown RBP27.52■■■□□ 2
RPL3-212ENST00000467105 NESP48681 1621 aa27.52■■■□□ 2
RPL3-212ENST00000467105 PEG3Q9GZU2 1588 aa27.45■■□□□ 1.99
RPL3-212ENST00000467105 MROH2BQ7Z745 1585 aa27.44■■□□□ 1.98
RPL3-212ENST00000467105 LAMC3Q9Y6N6 1575 aa27.22■■□□□ 1.95
RPL3-212ENST00000467105 THOC2Q8NI27 1593 aaKnown RBP27.17■■□□□ 1.94
RPL3-212ENST00000467105 PDS5BQ9NTI5 1447 aa27.12■■□□□ 1.93
RPL3-212ENST00000467105 CADPSQ9ULU8 1353 aa27.08■■□□□ 1.93
RPL3-212ENST00000467105 KIF21AQ7Z4S6 1674 aa27.07■■□□□ 1.92
RPL3-212ENST00000467105 WIZO95785 1651 aa27.06■■□□□ 1.92
RPL3-212ENST00000467105 MRC2Q9UBG0 1479 aa26.88■■□□□ 1.89
RPL3-212ENST00000467105 RSF1Q96T23 1441 aaPredicted RBP26.86■■□□□ 1.89
RPL3-212ENST00000467105 WDR62O43379 1518 aa26.81■■□□□ 1.88
RPL3-212ENST00000467105 CEP164Q9UPV0 1460 aa26.76■■□□□ 1.87
RPL3-212ENST00000467105 FANCD2Q9BXW9 1451 aa26.75■■□□□ 1.87
RPL3-212ENST00000467105 CFTRP13569 1480 aa26.74■■□□□ 1.87
RPL3-212ENST00000467105 TOP2AP11388 1531 aaKnown RBP26.72■■□□□ 1.87
RPL3-212ENST00000467105 URB2Q14146 1524 aaKnown RBP26.54■■□□□ 1.84
RPL3-212ENST00000467105 TRIM41Q8WV44 630 aa26.49■■□□□ 1.83
RPL3-212ENST00000467105 CCDC88BA6NC98 1476 aa26.46■■□□□ 1.83
RPL3-212ENST00000467105 OSCARQ8IYS5 282 aa26.38■■□□□ 1.81
RPL3-212ENST00000467105 PRDM2Q13029 1718 aa26.31■■□□□ 1.8
RPL3-212ENST00000467105 ZNF608Q9ULD9 1512 aaPredicted RBP26.25■■□□□ 1.79
RPL3-212ENST00000467105 IFT140Q96RY7 1462 aa26.24■■□□□ 1.79
RPL3-212ENST00000467105 TOPBP1Q92547 1522 aa26.23■■□□□ 1.79
RPL3-212ENST00000467105 ABCC8Q09428 1581 aa26.13■■□□□ 1.77
RPL3-212ENST00000467105 DNMBPQ6XZF7 1577 aa26.09■■□□□ 1.77
RPL3-212ENST00000467105 EIF4G3O43432 1585 aaKnown RBP26.03■■□□□ 1.76
RPL3-212ENST00000467105 AQRO60306 1485 aaKnown RBP eCLIP26.01■■□□□ 1.759e-8■■■■■ 46.2
RPL3-212ENST00000467105 RIMBP3CA6NJZ7 1639 aa25.97■■□□□ 1.75
RPL3-212ENST00000467105 RIMBP3BA6NNM3 1639 aa25.97■■□□□ 1.75
RPL3-212ENST00000467105 TARBP1Q13395 1621 aaKnown RBP25.97■■□□□ 1.75
RPL3-212ENST00000467105 RIMBP3Q9UFD9 1639 aa25.97■■□□□ 1.75
RPL3-212ENST00000467105 POLA1P09884 1462 aaPredicted RBP25.97■■□□□ 1.75
RPL3-212ENST00000467105 ARHGEF11O15085 1522 aa25.92■■□□□ 1.74
RPL3-212ENST00000467105 RAD54L2Q9Y4B4 1467 aa25.91■■□□□ 1.74
RPL3-212ENST00000467105 SOGA1O94964 1423 aa25.87■■□□□ 1.73
RPL3-212ENST00000467105 FBLN2P98095 1184 aa25.86■■□□□ 1.73
RPL3-212ENST00000467105 TDRD9Q8NDG6 1382 aaKnown RBP25.86■■□□□ 1.73
RPL3-212ENST00000467105 CHD1O14646 1710 aa25.81■■□□□ 1.72
RPL3-212ENST00000467105 CYB5RLQ6IPT4 315 aa25.8■■□□□ 1.72
RPL3-212ENST00000467105 FGD5Q6ZNL6 1462 aa25.79■■□□□ 1.72
RPL3-212ENST00000467105 CUX1P39880 1505 aa25.76■■□□□ 1.71
RPL3-212ENST00000467105 SNAPC4Q5SXM2 1469 aa25.71■■□□□ 1.71
RPL3-212ENST00000467105 SUPT5HO00267 1087 aaKnown RBP25.69■■□□□ 1.7
RPL3-212ENST00000467105 ARAP1Q96P48 1450 aa25.67■■□□□ 1.7
RPL3-212ENST00000467105 CHMP7Q8WUX9 453 aaPredicted RBP25.65■■□□□ 1.7
RPL3-212ENST00000467105 WDR97A6NE52 1622 aa25.65■■□□□ 1.7
RPL3-212ENST00000467105 GRIN2BQ13224 1484 aa25.63■■□□□ 1.69
RPL3-212ENST00000467105 MAGI1Q96QZ7 1491 aaPredicted RBP25.61■■□□□ 1.69
RPL3-212ENST00000467105 CLASP1Q7Z460 1538 aa25.56■■□□□ 1.68
RPL3-212ENST00000467105 SYNJ2O15056 1496 aa25.54■■□□□ 1.68
RPL3-212ENST00000467105 GAPVD1Q14C86 1478 aa25.53■■□□□ 1.68
RPL3-212ENST00000467105 SYNJ1O43426 1573 aa25.51■■□□□ 1.68
RPL3-212ENST00000467105 TRHP20396 242 aaPredicted RBP25.51■■□□□ 1.67
RPL3-212ENST00000467105 ABCA10Q8WWZ4 1543 aa25.49■■□□□ 1.67
RPL3-212ENST00000467105 PBRM1Q86U86 1689 aa25.43■■□□□ 1.66
RPL3-212ENST00000467105 ABCA5Q8WWZ7 1642 aa25.42■■□□□ 1.66
RPL3-212ENST00000467105 WRNQ14191 1432 aaPredicted RBP eCLIP25.39■■□□□ 1.65
RPL3-212ENST00000467105 TOP2BQ02880 1626 aa25.3■■□□□ 1.64
RPL3-212ENST00000467105 GRIN2AQ12879 1464 aa25.29■■□□□ 1.64
RPL3-212ENST00000467105 BIVM-ERCC5R4GMW8 1640 aa25.27■■□□□ 1.64
RPL3-212ENST00000467105 ADAMTS12P58397 1594 aa25.24■■□□□ 1.63
RPL3-212ENST00000467105 NUP160Q12769 1436 aa25.22■■□□□ 1.63
RPL3-212ENST00000467105 ERCC6L2Q5T890 1561 aa25.21■■□□□ 1.63
RPL3-212ENST00000467105 FHAD1B1AJZ9 1412 aa25.21■■□□□ 1.63
RPL3-212ENST00000467105 CEP170Q5SW79 1584 aa25.2■■□□□ 1.62
RPL3-212ENST00000467105 ERICH3Q5RHP9 1530 aa25.14■■□□□ 1.62
RPL3-212ENST00000467105 SHROOM2Q13796 1616 aa25.06■■□□□ 1.6
RPL3-212ENST00000467105 JPH4Q96JJ6 628 aa25.01■■□□□ 1.59
RPL3-212ENST00000467105 PRG4Q92954 1404 aaPredicted RBP25■■□□□ 1.59
RPL3-212ENST00000467105 IGF1RP08069 1367 aa24.89■■□□□ 1.58
RPL3-212ENST00000467105 RUSC2Q8N2Y8 1516 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms