RNA–Protein interactions for RNA: ENST00000464432.5

IMP4-211, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 5

Gene IMP4, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-211ENST00000464432 NISCHQ9Y2I1 1504 aa42.74■■■■■ 4.43
IMP4-211ENST00000464432 CCDC180Q9P1Z9 1646 aa38.05■■■■□ 3.68
IMP4-211ENST00000464432 ABCC9O60706 1549 aa37.45■■■■□ 3.59
IMP4-211ENST00000464432 RB1CC1Q8TDY2 1594 aa35.92■■■■□ 3.34
IMP4-211ENST00000464432 NACADO15069 1562 aa35.84■■■■□ 3.33
IMP4-211ENST00000464432 DCAF8L2P0C7V8 631 aa35.75■■■■□ 3.31
IMP4-211ENST00000464432 MYO15BQ96JP2 1530 aa35.58■■■■□ 3.29
IMP4-211ENST00000464432 ZCCHC6Q5VYS8 1495 aaKnown RBP35.57■■■■□ 3.28
IMP4-211ENST00000464432 DCAF1Q9Y4B6 1507 aa35.36■■■■□ 3.25
IMP4-211ENST00000464432 UNC13AQ9UPW8 1703 aa35.07■■■■□ 3.2
IMP4-211ENST00000464432 PABPN1Q86U42 306 aaKnown RBP eCLIP34.97■■■■□ 3.19
IMP4-211ENST00000464432 BICRAQ9NZM4 1560 aa34.87■■■■□ 3.17
IMP4-211ENST00000464432 SCRIBQ14160 1630 aa34.71■■■■□ 3.15
IMP4-211ENST00000464432 DNAJC5BQ9UF47 199 aa34.59■■■■□ 3.13
IMP4-211ENST00000464432 SHROOM4Q9ULL8 1493 aa34.48■■■■□ 3.11
IMP4-211ENST00000464432 EIF4G1Q04637 1599 aaKnown RBP33.96■■■■□ 3.03
IMP4-211ENST00000464432 CC2D2AQ9P2K1 1620 aa33.86■■■■□ 3.01
IMP4-211ENST00000464432 CECR2Q9BXF3 1484 aa33.68■■■□□ 2.98
IMP4-211ENST00000464432 SMARCA4P51532 1647 aa33.19■■■□□ 2.9
IMP4-211ENST00000464432 BAZ1AQ9NRL2 1556 aaPredicted RBP33.13■■■□□ 2.89
IMP4-211ENST00000464432 NCAPD3P42695 1498 aa33.1■■■□□ 2.89
IMP4-211ENST00000464432 ATAD2BQ9ULI0 1458 aa33.08■■■□□ 2.89
IMP4-211ENST00000464432 SMARCA2P51531 1590 aa33■■■□□ 2.87
IMP4-211ENST00000464432 MROH2BQ7Z745 1585 aa32.93■■■□□ 2.86
IMP4-211ENST00000464432 HMGXB3Q12766 1538 aa32.9■■■□□ 2.86
IMP4-211ENST00000464432 PEG3Q9GZU2 1588 aa32.89■■■□□ 2.86
IMP4-211ENST00000464432 BAZ1BQ9UIG0 1483 aaKnown RBP32.78■■■□□ 2.84
IMP4-211ENST00000464432 WIZO95785 1651 aa32.54■■■□□ 2.8
IMP4-211ENST00000464432 RSF1Q96T23 1441 aaPredicted RBP32.5■■■□□ 2.79
IMP4-211ENST00000464432 NESP48681 1621 aa32.36■■■□□ 2.77
IMP4-211ENST00000464432 ERCC6Q03468 1493 aa32.28■■■□□ 2.76
IMP4-211ENST00000464432 LAMC3Q9Y6N6 1575 aa32.23■■■□□ 2.75
IMP4-211ENST00000464432 TOP2AP11388 1531 aaKnown RBP32.21■■■□□ 2.75
IMP4-211ENST00000464432 CADPSQ9ULU8 1353 aa32.12■■■□□ 2.73
IMP4-211ENST00000464432 PDS5BQ9NTI5 1447 aa32.03■■■□□ 2.72
IMP4-211ENST00000464432 CUX2O14529 1486 aa32.03■■■□□ 2.72
IMP4-211ENST00000464432 KIF21AQ7Z4S6 1674 aa31.92■■■□□ 2.7
IMP4-211ENST00000464432 THOC2Q8NI27 1593 aaKnown RBP31.9■■■□□ 2.7
IMP4-211ENST00000464432 CFTRP13569 1480 aa31.89■■■□□ 2.7
IMP4-211ENST00000464432 CCDC88BA6NC98 1476 aa31.84■■■□□ 2.69
IMP4-211ENST00000464432 FANCD2Q9BXW9 1451 aa31.74■■■□□ 2.67
IMP4-211ENST00000464432 MRC2Q9UBG0 1479 aa31.72■■■□□ 2.67
IMP4-211ENST00000464432 CEP164Q9UPV0 1460 aa31.72■■■□□ 2.67
IMP4-211ENST00000464432 WDR62O43379 1518 aa31.63■■■□□ 2.65
IMP4-211ENST00000464432 PRDM2Q13029 1718 aa31.55■■■□□ 2.64
IMP4-211ENST00000464432 SUPT5HO00267 1087 aaKnown RBP31.49■■■□□ 2.63
IMP4-211ENST00000464432 URB2Q14146 1524 aaKnown RBP31.44■■■□□ 2.62
IMP4-211ENST00000464432 DNAJC5Q9H3Z4 198 aa31.29■■■□□ 2.6
IMP4-211ENST00000464432 TOPBP1Q92547 1522 aa31.21■■■□□ 2.59
IMP4-211ENST00000464432 ABCC8Q09428 1581 aa31.18■■■□□ 2.58
IMP4-211ENST00000464432 DNMBPQ6XZF7 1577 aa31.15■■■□□ 2.58
IMP4-211ENST00000464432 IFT140Q96RY7 1462 aa31.07■■■□□ 2.56
IMP4-211ENST00000464432 ZNF608Q9ULD9 1512 aaPredicted RBP30.95■■■□□ 2.55
IMP4-211ENST00000464432 POLA1P09884 1462 aaPredicted RBP30.95■■■□□ 2.54
IMP4-211ENST00000464432 CUX1P39880 1505 aa30.91■■■□□ 2.54
IMP4-211ENST00000464432 TARBP1Q13395 1621 aaKnown RBP30.88■■■□□ 2.53
IMP4-211ENST00000464432 FGD5Q6ZNL6 1462 aa30.83■■■□□ 2.53
IMP4-211ENST00000464432 RAD54L2Q9Y4B4 1467 aa30.81■■■□□ 2.52
IMP4-211ENST00000464432 EIF4G3O43432 1585 aaKnown RBP30.8■■■□□ 2.52
IMP4-211ENST00000464432 SOGA1O94964 1423 aa30.8■■■□□ 2.52
IMP4-211ENST00000464432 AQRO60306 1485 aaKnown RBP eCLIP30.75■■■□□ 2.515e-7■■■■■ 37.2
IMP4-211ENST00000464432 TDRD9Q8NDG6 1382 aaKnown RBP30.66■■■□□ 2.5
IMP4-211ENST00000464432 OSCARQ8IYS5 282 aa30.65■■■□□ 2.5
IMP4-211ENST00000464432 WRNQ14191 1432 aaPredicted RBP eCLIP30.64■■■□□ 2.49
IMP4-211ENST00000464432 WDR97A6NE52 1622 aa30.62■■■□□ 2.49
IMP4-211ENST00000464432 TOP2BQ02880 1626 aa30.58■■■□□ 2.49
IMP4-211ENST00000464432 SYNJ1O43426 1573 aa30.57■■■□□ 2.48
IMP4-211ENST00000464432 BIVM-ERCC5R4GMW8 1640 aa30.56■■■□□ 2.48
IMP4-211ENST00000464432 ABCA10Q8WWZ4 1543 aa30.52■■■□□ 2.48
IMP4-211ENST00000464432 GRIN2BQ13224 1484 aa30.46■■■□□ 2.47
IMP4-211ENST00000464432 SNAPC4Q5SXM2 1469 aa30.45■■■□□ 2.47
IMP4-211ENST00000464432 GAPVD1Q14C86 1478 aa30.44■■■□□ 2.46
IMP4-211ENST00000464432 CHD1O14646 1710 aa30.42■■■□□ 2.46
IMP4-211ENST00000464432 ABCA5Q8WWZ7 1642 aa30.41■■■□□ 2.46
IMP4-211ENST00000464432 MAGI1Q96QZ7 1491 aaPredicted RBP30.41■■■□□ 2.46
IMP4-211ENST00000464432 FBLN2P98095 1184 aa30.39■■■□□ 2.46
IMP4-211ENST00000464432 PBRM1Q86U86 1689 aa30.35■■■□□ 2.45
IMP4-211ENST00000464432 SYNJ2O15056 1496 aa30.3■■■□□ 2.44
IMP4-211ENST00000464432 CHMP7Q8WUX9 453 aaPredicted RBP30.29■■■□□ 2.44
IMP4-211ENST00000464432 RIMBP3CA6NJZ7 1639 aa30.18■■■□□ 2.42
IMP4-211ENST00000464432 RIMBP3BA6NNM3 1639 aa30.18■■■□□ 2.42
IMP4-211ENST00000464432 RIMBP3Q9UFD9 1639 aa30.18■■■□□ 2.42
IMP4-211ENST00000464432 ARHGEF11O15085 1522 aa30.17■■■□□ 2.42
IMP4-211ENST00000464432 TRIM41Q8WV44 630 aa30.15■■■□□ 2.42
IMP4-211ENST00000464432 ERICH3Q5RHP9 1530 aa30.15■■■□□ 2.42
IMP4-211ENST00000464432 CLASP1Q7Z460 1538 aa30.14■■■□□ 2.42
IMP4-211ENST00000464432 ADAMTS12P58397 1594 aa30.14■■■□□ 2.42
IMP4-211ENST00000464432 FHAD1B1AJZ9 1412 aa30.09■■■□□ 2.41
IMP4-211ENST00000464432 GRIN2AQ12879 1464 aa30.08■■■□□ 2.41
IMP4-211ENST00000464432 KIF27Q86VH2 1401 aa30■■■□□ 2.39
IMP4-211ENST00000464432 NUP160Q12769 1436 aa29.96■■■□□ 2.39
IMP4-211ENST00000464432 CEP170Q5SW79 1584 aa29.94■■■□□ 2.38
IMP4-211ENST00000464432 ARAP1Q96P48 1450 aa29.93■■■□□ 2.38
IMP4-211ENST00000464432 IGF1RP08069 1367 aa29.92■■■□□ 2.38
IMP4-211ENST00000464432 CYB5RLQ6IPT4 315 aa29.89■■■□□ 2.38
IMP4-211ENST00000464432 CUL7Q14999 1698 aa29.81■■■□□ 2.36
IMP4-211ENST00000464432 SHROOM2Q13796 1616 aa29.74■■■□□ 2.35
IMP4-211ENST00000464432 CARMIL1Q5VZK9 1371 aa29.73■■■□□ 2.35
IMP4-211ENST00000464432 ERCC6L2Q5T890 1561 aa29.71■■■□□ 2.35
IMP4-211ENST00000464432 RUSC2Q8N2Y8 1516 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 217.2 ms