RNA–Protein interactions for RNA: ENST00000458645.5

LINC01006-207, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 4 BASIC

Gene LINC01006, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-207ENST00000458645 NISCHQ9Y2I1 1504 aa19.41■□□□□ 0.7
LINC01006-207ENST00000458645 ABCC9O60706 1549 aa17.98■□□□□ 0.47
LINC01006-207ENST00000458645 CCDC180Q9P1Z9 1646 aa17.51■□□□□ 0.39
LINC01006-207ENST00000458645 AEBP2Q6ZN18 517 aaPredicted RBP17.5■□□□□ 0.39
LINC01006-207ENST00000458645 DNAJC5BQ9UF47 199 aa17.28■□□□□ 0.36
LINC01006-207ENST00000458645 RB1CC1Q8TDY2 1594 aa16.85■□□□□ 0.29
LINC01006-207ENST00000458645 PABPN1Q86U42 306 aaKnown RBP eCLIP16.7■□□□□ 0.26
LINC01006-207ENST00000458645 NACADO15069 1562 aa16.64■□□□□ 0.25
LINC01006-207ENST00000458645 UNC13AQ9UPW8 1703 aa16.54■□□□□ 0.24
LINC01006-207ENST00000458645 DCAF8L2P0C7V8 631 aa16.52■□□□□ 0.24
LINC01006-207ENST00000458645 BICRAQ9NZM4 1560 aa16.5■□□□□ 0.23
LINC01006-207ENST00000458645 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
LINC01006-207ENST00000458645 MYO15BQ96JP2 1530 aa16.27■□□□□ 0.2
LINC01006-207ENST00000458645 CC2D2AQ9P2K1 1620 aa16.19■□□□□ 0.18
LINC01006-207ENST00000458645 CECR2Q9BXF3 1484 aa16.19■□□□□ 0.18
LINC01006-207ENST00000458645 EIF4G1Q04637 1599 aaKnown RBP16.07■□□□□ 0.16
LINC01006-207ENST00000458645 SHROOM4Q9ULL8 1493 aa16.05■□□□□ 0.16
LINC01006-207ENST00000458645 SCRIBQ14160 1630 aa16.04■□□□□ 0.16
LINC01006-207ENST00000458645 ZCCHC6Q5VYS8 1495 aaKnown RBP16.03■□□□□ 0.16
LINC01006-207ENST00000458645 DNAJC5Q9H3Z4 198 aa16■□□□□ 0.15
LINC01006-207ENST00000458645 DCAF1Q9Y4B6 1507 aa15.95■□□□□ 0.14
LINC01006-207ENST00000458645 CUX2O14529 1486 aa15.54■□□□□ 0.08
LINC01006-207ENST00000458645 ERCC6Q03468 1493 aa15.46■□□□□ 0.06
LINC01006-207ENST00000458645 NCAPD3P42695 1498 aa15.4■□□□□ 0.06
LINC01006-207ENST00000458645 NESP48681 1621 aa15.39■□□□□ 0.05
LINC01006-207ENST00000458645 ATAD2BQ9ULI0 1458 aa15.33■□□□□ 0.05
LINC01006-207ENST00000458645 THOC2Q8NI27 1593 aaKnown RBP15.26■□□□□ 0.03
LINC01006-207ENST00000458645 HMGXB3Q12766 1538 aa15.24■□□□□ 0.03
LINC01006-207ENST00000458645 SMARCA4P51532 1647 aa15.22■□□□□ 0.03
LINC01006-207ENST00000458645 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
LINC01006-207ENST00000458645 TRIM41Q8WV44 630 aa15.17■□□□□ 0.02
LINC01006-207ENST00000458645 BAZ1BQ9UIG0 1483 aaKnown RBP15.13■□□□□ 0.01
LINC01006-207ENST00000458645 KIF21AQ7Z4S6 1674 aa15.12■□□□□ 0.01
LINC01006-207ENST00000458645 LAMC3Q9Y6N6 1575 aa15.08■□□□□ 0
LINC01006-207ENST00000458645 PEG3Q9GZU2 1588 aa15.06■□□□□ 0
LINC01006-207ENST00000458645 BAZ1AQ9NRL2 1556 aaPredicted RBP15.04■□□□□ -0
LINC01006-207ENST00000458645 MROH2BQ7Z745 1585 aa15.02□□□□□ -0.01
LINC01006-207ENST00000458645 SENP3Q9H4L4 574 aaPredicted RBP15.01□□□□□ -0.01
LINC01006-207ENST00000458645 PDS5BQ9NTI5 1447 aa14.99□□□□□ -0.01
LINC01006-207ENST00000458645 MRC2Q9UBG0 1479 aa14.94□□□□□ -0.02
LINC01006-207ENST00000458645 WDR62O43379 1518 aa14.92□□□□□ -0.02
LINC01006-207ENST00000458645 CADPSQ9ULU8 1353 aa14.91□□□□□ -0.02
LINC01006-207ENST00000458645 WIZO95785 1651 aa14.81□□□□□ -0.04
LINC01006-207ENST00000458645 CEP164Q9UPV0 1460 aa14.79□□□□□ -0.04
LINC01006-207ENST00000458645 FANCD2Q9BXW9 1451 aa14.76□□□□□ -0.05
LINC01006-207ENST00000458645 OSCARQ8IYS5 282 aa14.76□□□□□ -0.05
LINC01006-207ENST00000458645 PHF23Q9BUL5 403 aaPredicted RBP14.74□□□□□ -0.05
LINC01006-207ENST00000458645 URB2Q14146 1524 aaKnown RBP14.72□□□□□ -0.05
LINC01006-207ENST00000458645 RIMBP3CA6NJZ7 1639 aa14.7□□□□□ -0.06
LINC01006-207ENST00000458645 RIMBP3BA6NNM3 1639 aa14.7□□□□□ -0.06
LINC01006-207ENST00000458645 RIMBP3Q9UFD9 1639 aa14.7□□□□□ -0.06
LINC01006-207ENST00000458645 CFTRP13569 1480 aa14.69□□□□□ -0.06
LINC01006-207ENST00000458645 ZNF608Q9ULD9 1512 aaPredicted RBP14.62□□□□□ -0.07
LINC01006-207ENST00000458645 ARHGEF11O15085 1522 aa14.61□□□□□ -0.07
LINC01006-207ENST00000458645 RSF1Q96T23 1441 aaPredicted RBP14.54□□□□□ -0.08
LINC01006-207ENST00000458645 TOP2AP11388 1531 aaKnown RBP14.54□□□□□ -0.08
LINC01006-207ENST00000458645 CYB5RLQ6IPT4 315 aa14.5□□□□□ -0.09
LINC01006-207ENST00000458645 IFT140Q96RY7 1462 aa14.5□□□□□ -0.09
LINC01006-207ENST00000458645 EIF4G3O43432 1585 aaKnown RBP14.47□□□□□ -0.09
LINC01006-207ENST00000458645 ARAP1Q96P48 1450 aa14.47□□□□□ -0.09
LINC01006-207ENST00000458645 TOPBP1Q92547 1522 aa14.46□□□□□ -0.1
LINC01006-207ENST00000458645 PRDM2Q13029 1718 aa14.44□□□□□ -0.1
LINC01006-207ENST00000458645 CHD1O14646 1710 aa14.42□□□□□ -0.1
LINC01006-207ENST00000458645 TRHP20396 242 aaPredicted RBP14.42□□□□□ -0.1
LINC01006-207ENST00000458645 CCDC88BA6NC98 1476 aa14.42□□□□□ -0.1
LINC01006-207ENST00000458645 AQRO60306 1485 aaKnown RBP eCLIP14.42□□□□□ -0.1
LINC01006-207ENST00000458645 TARBP1Q13395 1621 aaKnown RBP14.37□□□□□ -0.11
LINC01006-207ENST00000458645 DNMBPQ6XZF7 1577 aa14.34□□□□□ -0.11
LINC01006-207ENST00000458645 FBLN2P98095 1184 aa14.33□□□□□ -0.12
LINC01006-207ENST00000458645 POLA1P09884 1462 aaPredicted RBP14.3□□□□□ -0.12
LINC01006-207ENST00000458645 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
LINC01006-207ENST00000458645 ABCC8Q09428 1581 aa14.27□□□□□ -0.12
LINC01006-207ENST00000458645 CLASP1Q7Z460 1538 aa14.27□□□□□ -0.12
LINC01006-207ENST00000458645 TDRD9Q8NDG6 1382 aaKnown RBP14.26□□□□□ -0.13
LINC01006-207ENST00000458645 SNAPC4Q5SXM2 1469 aa14.24□□□□□ -0.13
LINC01006-207ENST00000458645 SOGA1O94964 1423 aa14.19□□□□□ -0.14
LINC01006-207ENST00000458645 FGD5Q6ZNL6 1462 aa14.16□□□□□ -0.14
LINC01006-207ENST00000458645 SYNJ1O43426 1573 aa14.14□□□□□ -0.15
LINC01006-207ENST00000458645 CHMP7Q8WUX9 453 aaPredicted RBP14.12□□□□□ -0.15
LINC01006-207ENST00000458645 CUX1P39880 1505 aa14.11□□□□□ -0.15
LINC01006-207ENST00000458645 GAPVD1Q14C86 1478 aa14.11□□□□□ -0.15
LINC01006-207ENST00000458645 MAGI1Q96QZ7 1491 aaPredicted RBP14.11□□□□□ -0.15
LINC01006-207ENST00000458645 ERCC6L2Q5T890 1561 aa14.1□□□□□ -0.15
LINC01006-207ENST00000458645 SYNJ2O15056 1496 aa14.1□□□□□ -0.15
LINC01006-207ENST00000458645 GRIN2BQ13224 1484 aa14.09□□□□□ -0.15
LINC01006-207ENST00000458645 WDR97A6NE52 1622 aa14.08□□□□□ -0.16
LINC01006-207ENST00000458645 PBRM1Q86U86 1689 aa14.04□□□□□ -0.16
LINC01006-207ENST00000458645 FOXD1Q16676 465 aa14.01□□□□□ -0.17
LINC01006-207ENST00000458645 ABCA5Q8WWZ7 1642 aa13.98□□□□□ -0.17
LINC01006-207ENST00000458645 CEP170Q5SW79 1584 aa13.96□□□□□ -0.17
LINC01006-207ENST00000458645 ABCA10Q8WWZ4 1543 aa13.94□□□□□ -0.18
LINC01006-207ENST00000458645 GRIN2AQ12879 1464 aa13.93□□□□□ -0.18
LINC01006-207ENST00000458645 NUP160Q12769 1436 aa13.91□□□□□ -0.18
LINC01006-207ENST00000458645 KIF13AQ9H1H9 1805 aa13.91□□□□□ -0.18
LINC01006-207ENST00000458645 ADAMTS12P58397 1594 aa13.91□□□□□ -0.18
LINC01006-207ENST00000458645 SHROOM2Q13796 1616 aa13.9□□□□□ -0.19
LINC01006-207ENST00000458645 PRG4Q92954 1404 aaPredicted RBP13.81□□□□□ -0.2
LINC01006-207ENST00000458645 KDM4FA0A1W2PPD8 638 aa13.8□□□□□ -0.2
LINC01006-207ENST00000458645 FHAD1B1AJZ9 1412 aa13.8□□□□□ -0.2
LINC01006-207ENST00000458645 ABCC10Q5T3U5 1492 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms