RNA–Protein interactions for RNA: ENST00000357730.6

SLC6A9-201, Transcript of solute carrier family 6 member 9, humanhuman

TSL 1 (best) BASIC

Gene SLC6A9, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9-201ENST00000357730 NISCHQ9Y2I1 1504 aa40.65■■■■■ 4.1
SLC6A9-201ENST00000357730 CCDC180Q9P1Z9 1646 aa34.97■■■■□ 3.19
SLC6A9-201ENST00000357730 ZCCHC6Q5VYS8 1495 aaKnown RBP34.25■■■■□ 3.07
SLC6A9-201ENST00000357730 SHROOM4Q9ULL8 1493 aa33.98■■■■□ 3.03
SLC6A9-201ENST00000357730 DCAF8L2P0C7V8 631 aa33.72■■■□□ 2.99
SLC6A9-201ENST00000357730 DCAF1Q9Y4B6 1507 aa33.46■■■□□ 2.95
SLC6A9-201ENST00000357730 SUPT5HO00267 1087 aaKnown RBP33.04■■■□□ 2.88
SLC6A9-201ENST00000357730 ABCC9O60706 1549 aa32.76■■■□□ 2.84
SLC6A9-201ENST00000357730 MYO15BQ96JP2 1530 aa32.76■■■□□ 2.84
SLC6A9-201ENST00000357730 SCRIBQ14160 1630 aa32.51■■■□□ 2.79
SLC6A9-201ENST00000357730 NACADO15069 1562 aa32.47■■■□□ 2.79
SLC6A9-201ENST00000357730 RB1CC1Q8TDY2 1594 aa32.07■■■□□ 2.72
SLC6A9-201ENST00000357730 RSF1Q96T23 1441 aaPredicted RBP31.87■■■□□ 2.69
SLC6A9-201ENST00000357730 CHIC1Q5VXU3 224 aa31.86■■■□□ 2.69
SLC6A9-201ENST00000357730 CECR2Q9BXF3 1484 aa31.66■■■□□ 2.66
SLC6A9-201ENST00000357730 MROH2BQ7Z745 1585 aa31.51■■■□□ 2.64
SLC6A9-201ENST00000357730 UNC13AQ9UPW8 1703 aa31.51■■■□□ 2.63
SLC6A9-201ENST00000357730 WIZO95785 1651 aa31.31■■■□□ 2.6
SLC6A9-201ENST00000357730 BAZ1AQ9NRL2 1556 aaPredicted RBP31.3■■■□□ 2.6
SLC6A9-201ENST00000357730 PABPN1Q86U42 306 aaKnown RBP eCLIP31.15■■■□□ 2.58
SLC6A9-201ENST00000357730 BICRAQ9NZM4 1560 aa31.14■■■□□ 2.58
SLC6A9-201ENST00000357730 SMARCA4P51532 1647 aa31.1■■■□□ 2.57
SLC6A9-201ENST00000357730 TRIM41Q8WV44 630 aa30.91■■■□□ 2.54
SLC6A9-201ENST00000357730 TOP2AP11388 1531 aaKnown RBP30.88■■■□□ 2.53
SLC6A9-201ENST00000357730 LOC105371045A0A1W2PR82 267 aa30.82■■■□□ 2.52
SLC6A9-201ENST00000357730 CCDC88BA6NC98 1476 aa30.69■■■□□ 2.5
SLC6A9-201ENST00000357730 SMARCA2P51531 1590 aa30.66■■■□□ 2.5
SLC6A9-201ENST00000357730 EIF4G1Q04637 1599 aaKnown RBP30.63■■■□□ 2.49
SLC6A9-201ENST00000357730 PEG3Q9GZU2 1588 aa30.59■■■□□ 2.49
SLC6A9-201ENST00000357730 FAM9AQ8IZU1 332 aaPredicted RBP30.52■■■□□ 2.48
SLC6A9-201ENST00000357730 PELP1Q8IZL8 1130 aaKnown RBP30.45■■■□□ 2.47
SLC6A9-201ENST00000357730 ATAD2BQ9ULI0 1458 aa30.44■■■□□ 2.46
SLC6A9-201ENST00000357730 HRCP23327 699 aa30.44■■■□□ 2.46
SLC6A9-201ENST00000357730 ABCC8Q09428 1581 aa30.33■■■□□ 2.45
SLC6A9-201ENST00000357730 BAZ1BQ9UIG0 1483 aaKnown RBP30.33■■■□□ 2.45
SLC6A9-201ENST00000357730 EHMT2Q96KQ7 1210 aa30.2■■■□□ 2.42
SLC6A9-201ENST00000357730 PCGF6Q9BYE7 350 aa30.14■■■□□ 2.42
SLC6A9-201ENST00000357730 NCAPD3P42695 1498 aa30.01■■■□□ 2.39
SLC6A9-201ENST00000357730 WRNQ14191 1432 aaPredicted RBP eCLIP29.98■■■□□ 2.39
SLC6A9-201ENST00000357730 HMGXB3Q12766 1538 aa29.97■■■□□ 2.39
SLC6A9-201ENST00000357730 SOGA1O94964 1423 aa29.92■■■□□ 2.38
SLC6A9-201ENST00000357730 SYNJ1O43426 1573 aa29.83■■■□□ 2.37
SLC6A9-201ENST00000357730 TRIM26Q12899 539 aaPredicted RBP29.82■■■□□ 2.36
SLC6A9-201ENST00000357730 EEA1Q15075 1411 aa29.8■■■□□ 2.36
SLC6A9-201ENST00000357730 RUSC2Q8N2Y8 1516 aa29.79■■■□□ 2.36
SLC6A9-201ENST00000357730 CSRNP3Q8WYN3 585 aa29.74■■■□□ 2.35
SLC6A9-201ENST00000357730 MYT1Q01538 1121 aa29.58■■■□□ 2.33
SLC6A9-201ENST00000357730 TOP2BQ02880 1626 aa29.58■■■□□ 2.33
SLC6A9-201ENST00000357730 CC2D2AQ9P2K1 1620 aa29.57■■■□□ 2.32
SLC6A9-201ENST00000357730 CFTRP13569 1480 aa29.56■■■□□ 2.32
SLC6A9-201ENST00000357730 TNIKQ9UKE5 1360 aa29.55■■■□□ 2.32
SLC6A9-201ENST00000357730 UBTFP17480 764 aaKnown RBP29.53■■■□□ 2.32
SLC6A9-201ENST00000357730 GOLGA3Q08378 1498 aa29.51■■■□□ 2.31
SLC6A9-201ENST00000357730 CEP162Q5TB80 1403 aa29.5■■■□□ 2.31
SLC6A9-201ENST00000357730 BIVM-ERCC5R4GMW8 1640 aa29.5■■■□□ 2.31
SLC6A9-201ENST00000357730 CEP164Q9UPV0 1460 aa29.42■■■□□ 2.3
SLC6A9-201ENST00000357730 PPARGC1BQ86YN6 1023 aaKnown RBP29.41■■■□□ 2.3
SLC6A9-201ENST00000357730 CUX1P39880 1505 aa29.4■■■□□ 2.3
SLC6A9-201ENST00000357730 KIF21BO75037 1637 aa29.4■■■□□ 2.3
SLC6A9-201ENST00000357730 CADPSQ9ULU8 1353 aa29.36■■■□□ 2.29
SLC6A9-201ENST00000357730 PRDM2Q13029 1718 aa29.35■■■□□ 2.29
SLC6A9-201ENST00000357730 RAPGEF2Q9Y4G8 1499 aa29.24■■■□□ 2.27
SLC6A9-201ENST00000357730 KIF27Q86VH2 1401 aa29.14■■■□□ 2.25
SLC6A9-201ENST00000357730 CLIP1P30622 1438 aa29.11■■■□□ 2.25
SLC6A9-201ENST00000357730 PRXQ9BXM0 1461 aa29.09■■■□□ 2.25
SLC6A9-201ENST00000357730 TTBK1Q5TCY1 1321 aaPredicted RBP29.06■■■□□ 2.24
SLC6A9-201ENST00000357730 FANCD2Q9BXW9 1451 aa29.06■■■□□ 2.24
SLC6A9-201ENST00000357730 ERICH3Q5RHP9 1530 aa29.05■■■□□ 2.24
SLC6A9-201ENST00000357730 RANGAP1P46060 587 aaPredicted RBP29.01■■■□□ 2.23
SLC6A9-201ENST00000357730 NESP48681 1621 aa28.99■■■□□ 2.23
SLC6A9-201ENST00000357730 FGD5Q6ZNL6 1462 aa28.98■■■□□ 2.23
SLC6A9-201ENST00000357730 CUX2O14529 1486 aa28.95■■■□□ 2.23
SLC6A9-201ENST00000357730 ZEB1P37275 1124 aaPredicted RBP28.92■■■□□ 2.22
SLC6A9-201ENST00000357730 VPS8Q8N3P4 1428 aa28.92■■■□□ 2.22
SLC6A9-201ENST00000357730 LAMC3Q9Y6N6 1575 aa28.85■■■□□ 2.21
SLC6A9-201ENST00000357730 DNMBPQ6XZF7 1577 aa28.85■■■□□ 2.21
SLC6A9-201ENST00000357730 IGF1RP08069 1367 aa28.85■■■□□ 2.21
SLC6A9-201ENST00000357730 SCAF1Q9H7N4 1312 aaKnown RBP28.85■■■□□ 2.21
SLC6A9-201ENST00000357730 DNAJC5BQ9UF47 199 aa28.84■■■□□ 2.21
SLC6A9-201ENST00000357730 TOPBP1Q92547 1522 aa28.8■■■□□ 2.2
SLC6A9-201ENST00000357730 APLP2Q06481 763 aa28.77■■■□□ 2.2
SLC6A9-201ENST00000357730 POLA1P09884 1462 aaPredicted RBP28.73■■■□□ 2.19
SLC6A9-201ENST00000357730 RAD54L2Q9Y4B4 1467 aa28.73■■■□□ 2.19
SLC6A9-201ENST00000357730 CARMIL1Q5VZK9 1371 aa28.72■■■□□ 2.19
SLC6A9-201ENST00000357730 ARAP1Q96P48 1450 aa28.72■■■□□ 2.19
SLC6A9-201ENST00000357730 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.68■■■□□ 2.18
SLC6A9-201ENST00000357730 PDS5BQ9NTI5 1447 aa28.67■■■□□ 2.18
SLC6A9-201ENST00000357730 ABCA10Q8WWZ4 1543 aa28.67■■■□□ 2.18
SLC6A9-201ENST00000357730 URB2Q14146 1524 aaKnown RBP28.66■■■□□ 2.18
SLC6A9-201ENST00000357730 CCER1Q8TC90 406 aaPredicted RBP28.61■■■□□ 2.17
SLC6A9-201ENST00000357730 ARHGAP35Q9NRY4 1499 aa28.59■■■□□ 2.17
SLC6A9-201ENST00000357730 KIF21AQ7Z4S6 1674 aa28.54■■■□□ 2.16
SLC6A9-201ENST00000357730 WDR97A6NE52 1622 aa28.47■■■□□ 2.15
SLC6A9-201ENST00000357730 CUL7Q14999 1698 aa28.43■■■□□ 2.14
SLC6A9-201ENST00000357730 HNRNPUL2Q1KMD3 747 aaKnown RBP28.42■■■□□ 2.14
SLC6A9-201ENST00000357730 KANK4Q5T7N3 995 aaPredicted RBP28.42■■■□□ 2.14
SLC6A9-201ENST00000357730 TDRD9Q8NDG6 1382 aaKnown RBP28.42■■■□□ 2.14
SLC6A9-201ENST00000357730 ABCA5Q8WWZ7 1642 aa28.36■■■□□ 2.13
SLC6A9-201ENST00000357730 GAPVD1Q14C86 1478 aa28.35■■■□□ 2.13
SLC6A9-201ENST00000357730 P3H3Q8IVL6 736 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms