RNA–Protein interactions for RNA: ENST00000402203.5

TNRC6B-203, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNRC6B, Length 3,444 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-203ENST00000402203 NISCHQ9Y2I1 1504 aa27.81■■■□□ 2.04
TNRC6B-203ENST00000402203 SHROOM4Q9ULL8 1493 aa24.25■■□□□ 1.47
TNRC6B-203ENST00000402203 DCAF8L2P0C7V8 631 aa23.93■■□□□ 1.42
TNRC6B-203ENST00000402203 SUPT5HO00267 1087 aaKnown RBP23.68■■□□□ 1.38
TNRC6B-203ENST00000402203 CCDC180Q9P1Z9 1646 aa23.41■■□□□ 1.34
TNRC6B-203ENST00000402203 ZCCHC6Q5VYS8 1495 aaKnown RBP23.41■■□□□ 1.34
TNRC6B-203ENST00000402203 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
TNRC6B-203ENST00000402203 ABCC9O60706 1549 aa22.55■■□□□ 1.2
TNRC6B-203ENST00000402203 MYO15BQ96JP2 1530 aa22.51■■□□□ 1.19
TNRC6B-203ENST00000402203 DCAF1Q9Y4B6 1507 aa22.48■■□□□ 1.19
TNRC6B-203ENST00000402203 SCRIBQ14160 1630 aa22.44■■□□□ 1.18
TNRC6B-203ENST00000402203 LOC105371045A0A1W2PR82 267 aa22.25■■□□□ 1.15
TNRC6B-203ENST00000402203 EHMT2Q96KQ7 1210 aa22.11■■□□□ 1.13
TNRC6B-203ENST00000402203 RSF1Q96T23 1441 aaPredicted RBP22.07■■□□□ 1.12
TNRC6B-203ENST00000402203 FAM9AQ8IZU1 332 aaPredicted RBP22.01■■□□□ 1.11
TNRC6B-203ENST00000402203 CECR2Q9BXF3 1484 aa21.99■■□□□ 1.11
TNRC6B-203ENST00000402203 PCGF6Q9BYE7 350 aa21.96■■□□□ 1.11
TNRC6B-203ENST00000402203 TRIM41Q8WV44 630 aa21.85■■□□□ 1.09
TNRC6B-203ENST00000402203 RB1CC1Q8TDY2 1594 aa21.84■■□□□ 1.09
TNRC6B-203ENST00000402203 NACADO15069 1562 aa21.83■■□□□ 1.08
TNRC6B-203ENST00000402203 MROH2BQ7Z745 1585 aa21.78■■□□□ 1.08
TNRC6B-203ENST00000402203 PABPN1Q86U42 306 aaKnown RBP eCLIP21.75■■□□□ 1.07
TNRC6B-203ENST00000402203 WIZO95785 1651 aa21.65■■□□□ 1.06
TNRC6B-203ENST00000402203 PPARGC1BQ86YN6 1023 aaKnown RBP21.54■■□□□ 1.04
TNRC6B-203ENST00000402203 HRCP23327 699 aa21.51■■□□□ 1.03
TNRC6B-203ENST00000402203 UNC13AQ9UPW8 1703 aa21.33■■□□□ 1.01
TNRC6B-203ENST00000402203 BAZ1AQ9NRL2 1556 aaPredicted RBP21.31■■□□□ 1
TNRC6B-203ENST00000402203 TRIM26Q12899 539 aaPredicted RBP21.26■□□□□ 0.99
TNRC6B-203ENST00000402203 TTBK1Q5TCY1 1321 aaPredicted RBP21.26■□□□□ 0.99
TNRC6B-203ENST00000402203 ABCC8Q09428 1581 aa21.22■□□□□ 0.99
TNRC6B-203ENST00000402203 CCDC88BA6NC98 1476 aa21.21■□□□□ 0.99
TNRC6B-203ENST00000402203 SMARCA4P51532 1647 aa21.2■□□□□ 0.98
TNRC6B-203ENST00000402203 BICRAQ9NZM4 1560 aa21.12■□□□□ 0.97
TNRC6B-203ENST00000402203 TOP2AP11388 1531 aaKnown RBP21.08■□□□□ 0.97
TNRC6B-203ENST00000402203 SMARCA2P51531 1590 aa21.05■□□□□ 0.96
TNRC6B-203ENST00000402203 SOGA1O94964 1423 aa21.01■□□□□ 0.95
TNRC6B-203ENST00000402203 EIF4G1Q04637 1599 aaKnown RBP20.97■□□□□ 0.95
TNRC6B-203ENST00000402203 RUSC2Q8N2Y8 1516 aa20.97■□□□□ 0.95
TNRC6B-203ENST00000402203 RANGAP1P46060 587 aaPredicted RBP20.95■□□□□ 0.95
TNRC6B-203ENST00000402203 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
TNRC6B-203ENST00000402203 CSRNP3Q8WYN3 585 aa20.82■□□□□ 0.92
TNRC6B-203ENST00000402203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.8■□□□□ 0.92
TNRC6B-203ENST00000402203 ATAD2BQ9ULI0 1458 aa20.8■□□□□ 0.92
TNRC6B-203ENST00000402203 BAZ1BQ9UIG0 1483 aaKnown RBP20.76■□□□□ 0.91
TNRC6B-203ENST00000402203 WRNQ14191 1432 aaPredicted RBP eCLIP20.73■□□□□ 0.91
TNRC6B-203ENST00000402203 CEP162Q5TB80 1403 aa20.69■□□□□ 0.9
TNRC6B-203ENST00000402203 SYNJ1O43426 1573 aa20.63■□□□□ 0.89
TNRC6B-203ENST00000402203 CCER1Q8TC90 406 aaPredicted RBP20.6■□□□□ 0.89
TNRC6B-203ENST00000402203 PEG3Q9GZU2 1588 aa20.58■□□□□ 0.89
TNRC6B-203ENST00000402203 TNIKQ9UKE5 1360 aa20.54■□□□□ 0.88
TNRC6B-203ENST00000402203 ZEB1P37275 1124 aaPredicted RBP20.49■□□□□ 0.87
TNRC6B-203ENST00000402203 HNRNPUL2Q1KMD3 747 aaKnown RBP20.46■□□□□ 0.87
TNRC6B-203ENST00000402203 GOLGA3Q08378 1498 aa20.45■□□□□ 0.86
TNRC6B-203ENST00000402203 RAPGEF2Q9Y4G8 1499 aa20.43■□□□□ 0.86
TNRC6B-203ENST00000402203 EEA1Q15075 1411 aa20.4■□□□□ 0.86
TNRC6B-203ENST00000402203 CLIP1P30622 1438 aa20.35■□□□□ 0.85
TNRC6B-203ENST00000402203 CEP164Q9UPV0 1460 aa20.33■□□□□ 0.85
TNRC6B-203ENST00000402203 NCAPD3P42695 1498 aa20.31■□□□□ 0.84
TNRC6B-203ENST00000402203 APLP2Q06481 763 aa20.28■□□□□ 0.84
TNRC6B-203ENST00000402203 CUX1P39880 1505 aa20.23■□□□□ 0.83
TNRC6B-203ENST00000402203 TOP2BQ02880 1626 aa20.22■□□□□ 0.83
TNRC6B-203ENST00000402203 DNAJC5BQ9UF47 199 aa20.18■□□□□ 0.82
TNRC6B-203ENST00000402203 KIF21BO75037 1637 aa20.17■□□□□ 0.82
TNRC6B-203ENST00000402203 HMGXB3Q12766 1538 aa20.16■□□□□ 0.82
TNRC6B-203ENST00000402203 KANK4Q5T7N3 995 aaPredicted RBP20.15■□□□□ 0.82
TNRC6B-203ENST00000402203 CFTRP13569 1480 aa20.14■□□□□ 0.81
TNRC6B-203ENST00000402203 P3H3Q8IVL6 736 aa20.12■□□□□ 0.81
TNRC6B-203ENST00000402203 VPS8Q8N3P4 1428 aa20.12■□□□□ 0.81
TNRC6B-203ENST00000402203 ITGAEP38570 1179 aa20.11■□□□□ 0.81
TNRC6B-203ENST00000402203 ATP1B4Q9UN42 357 aaPredicted RBP20.07■□□□□ 0.8
TNRC6B-203ENST00000402203 KIF27Q86VH2 1401 aa20.07■□□□□ 0.8
TNRC6B-203ENST00000402203 BIVM-ERCC5R4GMW8 1640 aa20.07■□□□□ 0.8
TNRC6B-203ENST00000402203 CC2D2AQ9P2K1 1620 aa20.06■□□□□ 0.8
TNRC6B-203ENST00000402203 CADPSQ9ULU8 1353 aa20.05■□□□□ 0.8
TNRC6B-203ENST00000402203 CUX2O14529 1486 aa20.05■□□□□ 0.8
TNRC6B-203ENST00000402203 PRXQ9BXM0 1461 aa20.04■□□□□ 0.8
TNRC6B-203ENST00000402203 NESP48681 1621 aa20.03■□□□□ 0.8
TNRC6B-203ENST00000402203 ARAP1Q96P48 1450 aa20.01■□□□□ 0.79
TNRC6B-203ENST00000402203 DIEXFQ68CQ4 756 aaKnown RBP20■□□□□ 0.79
TNRC6B-203ENST00000402203 IGF1RP08069 1367 aa19.97■□□□□ 0.79
TNRC6B-203ENST00000402203 FGD5Q6ZNL6 1462 aa19.94■□□□□ 0.78
TNRC6B-203ENST00000402203 RAD54L2Q9Y4B4 1467 aa19.93■□□□□ 0.78
TNRC6B-203ENST00000402203 CARMIL1Q5VZK9 1371 aa19.89■□□□□ 0.77
TNRC6B-203ENST00000402203 FANCD2Q9BXW9 1451 aa19.89■□□□□ 0.77
TNRC6B-203ENST00000402203 ARHGAP35Q9NRY4 1499 aa19.87■□□□□ 0.77
TNRC6B-203ENST00000402203 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
TNRC6B-203ENST00000402203 SCAF1Q9H7N4 1312 aaKnown RBP19.85■□□□□ 0.77
TNRC6B-203ENST00000402203 YTHDC1Q96MU7 727 aaKnown RBP19.84■□□□□ 0.77
TNRC6B-203ENST00000402203 ZNF316A6NFI3 1004 aaPredicted RBP19.82■□□□□ 0.76
TNRC6B-203ENST00000402203 TDRD9Q8NDG6 1382 aaKnown RBP19.78■□□□□ 0.76
TNRC6B-203ENST00000402203 NEUROD1Q13562 356 aa19.77■□□□□ 0.76
TNRC6B-203ENST00000402203 FAM50AQ14320 339 aaKnown RBP19.75■□□□□ 0.75
TNRC6B-203ENST00000402203 POLA1P09884 1462 aaPredicted RBP19.71■□□□□ 0.75
TNRC6B-203ENST00000402203 FHOD3Q2V2M9 1422 aa19.7■□□□□ 0.74
TNRC6B-203ENST00000402203 MIER1Q8N108 512 aa19.69■□□□□ 0.74
TNRC6B-203ENST00000402203 TOPBP1Q92547 1522 aa19.69■□□□□ 0.74
TNRC6B-203ENST00000402203 ARID3CA6NKF2 412 aa19.69■□□□□ 0.74
TNRC6B-203ENST00000402203 PRDM2Q13029 1718 aa19.68■□□□□ 0.74
TNRC6B-203ENST00000402203 DHX57Q6P158 1386 aaKnown RBP19.66■□□□□ 0.74
TNRC6B-203ENST00000402203 CCNB3Q8WWL7 1395 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms