RNA–Protein interactions for RNA: ENST00000473689.5

IMP4-213, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 5

Gene IMP4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-213ENST00000473689 NISCHQ9Y2I1 1504 aa51.4■■■■■ 5.82
IMP4-213ENST00000473689 CCDC180Q9P1Z9 1646 aa45.86■■■■■ 4.93
IMP4-213ENST00000473689 ABCC9O60706 1549 aa45.74■■■■■ 4.91
IMP4-213ENST00000473689 RB1CC1Q8TDY2 1594 aa43.6■■■■■ 4.57
IMP4-213ENST00000473689 NACADO15069 1562 aa43.41■■■■■ 4.54
IMP4-213ENST00000473689 DCAF8L2P0C7V8 631 aa43.3■■■■■ 4.52
IMP4-213ENST00000473689 MYO15BQ96JP2 1530 aa42.97■■■■■ 4.47
IMP4-213ENST00000473689 DNAJC5BQ9UF47 199 aa42.84■■■■■ 4.45
IMP4-213ENST00000473689 PABPN1Q86U42 306 aaKnown RBP eCLIP42.71■■■■■ 4.43
IMP4-213ENST00000473689 ZCCHC6Q5VYS8 1495 aaKnown RBP42.63■■■■■ 4.42
IMP4-213ENST00000473689 DCAF1Q9Y4B6 1507 aa42.49■■■■■ 4.39
IMP4-213ENST00000473689 UNC13AQ9UPW8 1703 aa42.47■■■■■ 4.39
IMP4-213ENST00000473689 BICRAQ9NZM4 1560 aa42.37■■■■■ 4.37
IMP4-213ENST00000473689 SHROOM4Q9ULL8 1493 aa41.84■■■■■ 4.29
IMP4-213ENST00000473689 SCRIBQ14160 1630 aa41.82■■■■■ 4.29
IMP4-213ENST00000473689 CC2D2AQ9P2K1 1620 aa41.29■■■■■ 4.2
IMP4-213ENST00000473689 EIF4G1Q04637 1599 aaKnown RBP41.28■■■■■ 4.2
IMP4-213ENST00000473689 CECR2Q9BXF3 1484 aa41.2■■■■■ 4.19
IMP4-213ENST00000473689 NCAPD3P42695 1498 aa40.17■■■■■ 4.02
IMP4-213ENST00000473689 ATAD2BQ9ULI0 1458 aa40.05■■■■■ 4
IMP4-213ENST00000473689 SMARCA4P51532 1647 aa39.96■■■■□ 3.99
IMP4-213ENST00000473689 SMARCA2P51531 1590 aa39.87■■■■□ 3.97
IMP4-213ENST00000473689 BAZ1AQ9NRL2 1556 aaPredicted RBP39.84■■■■□ 3.97
IMP4-213ENST00000473689 HMGXB3Q12766 1538 aa39.78■■■■□ 3.96
IMP4-213ENST00000473689 PEG3Q9GZU2 1588 aa39.63■■■■□ 3.94
IMP4-213ENST00000473689 MROH2BQ7Z745 1585 aa39.61■■■■□ 3.93
IMP4-213ENST00000473689 BAZ1BQ9UIG0 1483 aaKnown RBP39.6■■■■□ 3.93
IMP4-213ENST00000473689 ERCC6Q03468 1493 aa39.43■■■■□ 3.9
IMP4-213ENST00000473689 NESP48681 1621 aa39.37■■■■□ 3.89
IMP4-213ENST00000473689 CUX2O14529 1486 aa39.33■■■■□ 3.89
IMP4-213ENST00000473689 DNAJC5Q9H3Z4 198 aa39.14■■■■□ 3.86
IMP4-213ENST00000473689 LAMC3Q9Y6N6 1575 aa39.09■■■■□ 3.85
IMP4-213ENST00000473689 WIZO95785 1651 aa39.05■■■■□ 3.84
IMP4-213ENST00000473689 CADPSQ9ULU8 1353 aa38.95■■■■□ 3.83
IMP4-213ENST00000473689 PDS5BQ9NTI5 1447 aa38.94■■■■□ 3.82
IMP4-213ENST00000473689 RSF1Q96T23 1441 aaPredicted RBP38.93■■■■□ 3.82
IMP4-213ENST00000473689 THOC2Q8NI27 1593 aaKnown RBP38.84■■■■□ 3.81
IMP4-213ENST00000473689 KIF21AQ7Z4S6 1674 aa38.71■■■■□ 3.79
IMP4-213ENST00000473689 TOP2AP11388 1531 aaKnown RBP38.62■■■■□ 3.77
IMP4-213ENST00000473689 CFTRP13569 1480 aa38.54■■■■□ 3.76
IMP4-213ENST00000473689 MRC2Q9UBG0 1479 aa38.54■■■■□ 3.76
IMP4-213ENST00000473689 FANCD2Q9BXW9 1451 aa38.44■■■■□ 3.74
IMP4-213ENST00000473689 WDR62O43379 1518 aa38.43■■■■□ 3.74
IMP4-213ENST00000473689 CEP164Q9UPV0 1460 aa38.42■■■■□ 3.74
IMP4-213ENST00000473689 CCDC88BA6NC98 1476 aa38.25■■■■□ 3.71
IMP4-213ENST00000473689 URB2Q14146 1524 aaKnown RBP38.12■■■■□ 3.69
IMP4-213ENST00000473689 PRDM2Q13029 1718 aa37.89■■■■□ 3.66
IMP4-213ENST00000473689 TOPBP1Q92547 1522 aa37.74■■■■□ 3.63
IMP4-213ENST00000473689 IFT140Q96RY7 1462 aa37.7■■■■□ 3.63
IMP4-213ENST00000473689 ABCC8Q09428 1581 aa37.69■■■■□ 3.62
IMP4-213ENST00000473689 OSCARQ8IYS5 282 aa37.67■■■■□ 3.62
IMP4-213ENST00000473689 ZNF608Q9ULD9 1512 aaPredicted RBP37.61■■■■□ 3.61
IMP4-213ENST00000473689 DNMBPQ6XZF7 1577 aa37.57■■■■□ 3.6
IMP4-213ENST00000473689 TRIM41Q8WV44 630 aa37.42■■■■□ 3.58
IMP4-213ENST00000473689 SUPT5HO00267 1087 aaKnown RBP37.38■■■■□ 3.57
IMP4-213ENST00000473689 POLA1P09884 1462 aaPredicted RBP37.38■■■■□ 3.57
IMP4-213ENST00000473689 TARBP1Q13395 1621 aaKnown RBP37.35■■■■□ 3.57
IMP4-213ENST00000473689 AQRO60306 1485 aaKnown RBP eCLIP37.33■■■■□ 3.575e-7■■■■■ 37.2
IMP4-213ENST00000473689 EIF4G3O43432 1585 aaKnown RBP37.3■■■■□ 3.56
IMP4-213ENST00000473689 SOGA1O94964 1423 aa37.26■■■■□ 3.55
IMP4-213ENST00000473689 RAD54L2Q9Y4B4 1467 aa37.25■■■■□ 3.55
IMP4-213ENST00000473689 CUX1P39880 1505 aa37.17■■■■□ 3.54
IMP4-213ENST00000473689 FGD5Q6ZNL6 1462 aa37.16■■■■□ 3.54
IMP4-213ENST00000473689 TDRD9Q8NDG6 1382 aaKnown RBP37.16■■■■□ 3.54
IMP4-213ENST00000473689 FBLN2P98095 1184 aa37.02■■■■□ 3.52
IMP4-213ENST00000473689 RIMBP3CA6NJZ7 1639 aa36.98■■■■□ 3.51
IMP4-213ENST00000473689 RIMBP3BA6NNM3 1639 aa36.98■■■■□ 3.51
IMP4-213ENST00000473689 RIMBP3Q9UFD9 1639 aa36.98■■■■□ 3.51
IMP4-213ENST00000473689 WDR97A6NE52 1622 aa36.96■■■■□ 3.51
IMP4-213ENST00000473689 ARHGEF11O15085 1522 aa36.95■■■■□ 3.5
IMP4-213ENST00000473689 CHD1O14646 1710 aa36.9■■■■□ 3.5
IMP4-213ENST00000473689 SNAPC4Q5SXM2 1469 aa36.89■■■■□ 3.5
IMP4-213ENST00000473689 GRIN2BQ13224 1484 aa36.87■■■■□ 3.49
IMP4-213ENST00000473689 MAGI1Q96QZ7 1491 aaPredicted RBP36.82■■■■□ 3.49
IMP4-213ENST00000473689 CHMP7Q8WUX9 453 aaPredicted RBP36.82■■■■□ 3.48
IMP4-213ENST00000473689 ABCA10Q8WWZ4 1543 aa36.79■■■■□ 3.48
IMP4-213ENST00000473689 GAPVD1Q14C86 1478 aa36.76■■■■□ 3.48
IMP4-213ENST00000473689 CYB5RLQ6IPT4 315 aa36.75■■■■□ 3.47
IMP4-213ENST00000473689 SYNJ2O15056 1496 aa36.71■■■■□ 3.47
IMP4-213ENST00000473689 WRNQ14191 1432 aaPredicted RBP eCLIP36.7■■■■□ 3.47
IMP4-213ENST00000473689 CLASP1Q7Z460 1538 aa36.64■■■■□ 3.46
IMP4-213ENST00000473689 ABCA5Q8WWZ7 1642 aa36.63■■■■□ 3.45
IMP4-213ENST00000473689 ARAP1Q96P48 1450 aa36.62■■■■□ 3.45
IMP4-213ENST00000473689 TOP2BQ02880 1626 aa36.61■■■■□ 3.45
IMP4-213ENST00000473689 SYNJ1O43426 1573 aa36.59■■■■□ 3.45
IMP4-213ENST00000473689 BIVM-ERCC5R4GMW8 1640 aa36.57■■■■□ 3.44
IMP4-213ENST00000473689 PBRM1Q86U86 1689 aa36.54■■■■□ 3.44
IMP4-213ENST00000473689 GRIN2AQ12879 1464 aa36.37■■■■□ 3.41
IMP4-213ENST00000473689 FHAD1B1AJZ9 1412 aa36.34■■■■□ 3.41
IMP4-213ENST00000473689 ADAMTS12P58397 1594 aa36.32■■■■□ 3.4
IMP4-213ENST00000473689 ERICH3Q5RHP9 1530 aa36.3■■■■□ 3.4
IMP4-213ENST00000473689 NUP160Q12769 1436 aa36.29■■■■□ 3.4
IMP4-213ENST00000473689 CEP170Q5SW79 1584 aa36.2■■■■□ 3.39
IMP4-213ENST00000473689 TRHP20396 242 aaPredicted RBP36.2■■■■□ 3.39
IMP4-213ENST00000473689 ERCC6L2Q5T890 1561 aa36.08■■■■□ 3.37
IMP4-213ENST00000473689 IGF1RP08069 1367 aa36.02■■■■□ 3.36
IMP4-213ENST00000473689 SHROOM2Q13796 1616 aa36.01■■■■□ 3.36
IMP4-213ENST00000473689 JPH4Q96JJ6 628 aa35.98■■■■□ 3.35
IMP4-213ENST00000473689 KIF27Q86VH2 1401 aa35.97■■■■□ 3.35
IMP4-213ENST00000473689 PRG4Q92954 1404 aaPredicted RBP35.91■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 215.4 ms