RNA–Protein interactions for RNA: ENST00000553342.1

NFKBIA-202, Transcript of NFKB inhibitor alpha, humanhuman

TSL 5

Gene NFKBIA, Length 212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-202ENST00000553342 NISCHQ9Y2I1 1504 aa50.11■■■■■ 5.61
NFKBIA-202ENST00000553342 CCDC180Q9P1Z9 1646 aa44.57■■■■■ 4.73
NFKBIA-202ENST00000553342 ABCC9O60706 1549 aa43.78■■■■■ 4.6
NFKBIA-202ENST00000553342 RB1CC1Q8TDY2 1594 aa42.03■■■■■ 4.32
NFKBIA-202ENST00000553342 DCAF8L2P0C7V8 631 aa41.97■■■■■ 4.31
NFKBIA-202ENST00000553342 NACADO15069 1562 aa41.95■■■■■ 4.31
NFKBIA-202ENST00000553342 ZCCHC6Q5VYS8 1495 aaKnown RBP41.72■■■■■ 4.27
NFKBIA-202ENST00000553342 MYO15BQ96JP2 1530 aa41.64■■■■■ 4.26
NFKBIA-202ENST00000553342 DCAF1Q9Y4B6 1507 aa41.43■■■■■ 4.22
NFKBIA-202ENST00000553342 UNC13AQ9UPW8 1703 aa41.04■■■■■ 4.16
NFKBIA-202ENST00000553342 PABPN1Q86U42 306 aaKnown RBP eCLIP40.9■■■■■ 4.14
NFKBIA-202ENST00000553342 BICRAQ9NZM4 1560 aa40.75■■■■■ 4.11
NFKBIA-202ENST00000553342 SCRIBQ14160 1630 aa40.72■■■■■ 4.11
NFKBIA-202ENST00000553342 SHROOM4Q9ULL8 1493 aa40.31■■■■■ 4.04
NFKBIA-202ENST00000553342 DNAJC5BQ9UF47 199 aa40.25■■■■■ 4.03
NFKBIA-202ENST00000553342 EIF4G1Q04637 1599 aaKnown RBP39.7■■■■□ 3.95
NFKBIA-202ENST00000553342 CC2D2AQ9P2K1 1620 aa39.57■■■■□ 3.92
NFKBIA-202ENST00000553342 CECR2Q9BXF3 1484 aa39.34■■■■□ 3.89
NFKBIA-202ENST00000553342 SMARCA4P51532 1647 aa38.91■■■■□ 3.82
NFKBIA-202ENST00000553342 BAZ1AQ9NRL2 1556 aaPredicted RBP38.85■■■■□ 3.81
NFKBIA-202ENST00000553342 ATAD2BQ9ULI0 1458 aa38.73■■■■□ 3.79
NFKBIA-202ENST00000553342 NCAPD3P42695 1498 aa38.71■■■■□ 3.79
NFKBIA-202ENST00000553342 SMARCA2P51531 1590 aa38.67■■■■□ 3.78
NFKBIA-202ENST00000553342 MROH2BQ7Z745 1585 aa38.62■■■■□ 3.77
NFKBIA-202ENST00000553342 HMGXB3Q12766 1538 aa38.52■■■■□ 3.76
NFKBIA-202ENST00000553342 PEG3Q9GZU2 1588 aa38.51■■■■□ 3.76
NFKBIA-202ENST00000553342 BAZ1BQ9UIG0 1483 aaKnown RBP38.42■■■■□ 3.74
NFKBIA-202ENST00000553342 WIZO95785 1651 aa38.2■■■■□ 3.71
NFKBIA-202ENST00000553342 RSF1Q96T23 1441 aaPredicted RBP38.14■■■■□ 3.7
NFKBIA-202ENST00000553342 NESP48681 1621 aa37.84■■■■□ 3.65
NFKBIA-202ENST00000553342 TOP2AP11388 1531 aaKnown RBP37.8■■■■□ 3.64
NFKBIA-202ENST00000553342 ERCC6Q03468 1493 aa37.75■■■■□ 3.63
NFKBIA-202ENST00000553342 LAMC3Q9Y6N6 1575 aa37.7■■■■□ 3.63
NFKBIA-202ENST00000553342 CADPSQ9ULU8 1353 aa37.59■■■■□ 3.61
NFKBIA-202ENST00000553342 PDS5BQ9NTI5 1447 aa37.47■■■■□ 3.59
NFKBIA-202ENST00000553342 KIF21AQ7Z4S6 1674 aa37.37■■■■□ 3.57
NFKBIA-202ENST00000553342 CCDC88BA6NC98 1476 aa37.36■■■■□ 3.57
NFKBIA-202ENST00000553342 CUX2O14529 1486 aa37.35■■■■□ 3.57
NFKBIA-202ENST00000553342 CFTRP13569 1480 aa37.34■■■■□ 3.57
NFKBIA-202ENST00000553342 THOC2Q8NI27 1593 aaKnown RBP37.27■■■■□ 3.56
NFKBIA-202ENST00000553342 FANCD2Q9BXW9 1451 aa37.17■■■■□ 3.54
NFKBIA-202ENST00000553342 SUPT5HO00267 1087 aaKnown RBP37.15■■■■□ 3.54
NFKBIA-202ENST00000553342 CEP164Q9UPV0 1460 aa37.13■■■■□ 3.54
NFKBIA-202ENST00000553342 MRC2Q9UBG0 1479 aa37.1■■■■□ 3.53
NFKBIA-202ENST00000553342 PRDM2Q13029 1718 aa37.02■■■■□ 3.52
NFKBIA-202ENST00000553342 WDR62O43379 1518 aa36.98■■■■□ 3.51
NFKBIA-202ENST00000553342 URB2Q14146 1524 aaKnown RBP36.8■■■■□ 3.48
NFKBIA-202ENST00000553342 TOPBP1Q92547 1522 aa36.56■■■■□ 3.44
NFKBIA-202ENST00000553342 ABCC8Q09428 1581 aa36.53■■■■□ 3.44
NFKBIA-202ENST00000553342 DNMBPQ6XZF7 1577 aa36.5■■■■□ 3.43
NFKBIA-202ENST00000553342 IFT140Q96RY7 1462 aa36.36■■■■□ 3.41
NFKBIA-202ENST00000553342 DNAJC5Q9H3Z4 198 aa36.33■■■■□ 3.41
NFKBIA-202ENST00000553342 POLA1P09884 1462 aaPredicted RBP36.24■■■■□ 3.39
NFKBIA-202ENST00000553342 CUX1P39880 1505 aa36.24■■■■□ 3.39
NFKBIA-202ENST00000553342 ZNF608Q9ULD9 1512 aaPredicted RBP36.21■■■■□ 3.39
NFKBIA-202ENST00000553342 TARBP1Q13395 1621 aaKnown RBP36.16■■■■□ 3.38
NFKBIA-202ENST00000553342 FGD5Q6ZNL6 1462 aa36.15■■■■□ 3.38
NFKBIA-202ENST00000553342 RAD54L2Q9Y4B4 1467 aa36.1■■■■□ 3.37
NFKBIA-202ENST00000553342 SOGA1O94964 1423 aa36.09■■■■□ 3.37
NFKBIA-202ENST00000553342 EIF4G3O43432 1585 aaKnown RBP36.06■■■■□ 3.36
NFKBIA-202ENST00000553342 AQRO60306 1485 aaKnown RBP eCLIP35.99■■■■□ 3.351e-13■■■□□ 19.2
NFKBIA-202ENST00000553342 WRNQ14191 1432 aaPredicted RBP eCLIP35.99■■■■□ 3.35
NFKBIA-202ENST00000553342 TDRD9Q8NDG6 1382 aaKnown RBP35.92■■■■□ 3.34
NFKBIA-202ENST00000553342 SYNJ1O43426 1573 aa35.9■■■■□ 3.34
NFKBIA-202ENST00000553342 TOP2BQ02880 1626 aa35.9■■■■□ 3.34
NFKBIA-202ENST00000553342 BIVM-ERCC5R4GMW8 1640 aa35.88■■■■□ 3.33
NFKBIA-202ENST00000553342 WDR97A6NE52 1622 aa35.85■■■■□ 3.33
NFKBIA-202ENST00000553342 OSCARQ8IYS5 282 aa35.8■■■■□ 3.32
NFKBIA-202ENST00000553342 ABCA10Q8WWZ4 1543 aa35.78■■■■□ 3.32
NFKBIA-202ENST00000553342 GRIN2BQ13224 1484 aa35.68■■■■□ 3.3
NFKBIA-202ENST00000553342 GAPVD1Q14C86 1478 aa35.68■■■■□ 3.3
NFKBIA-202ENST00000553342 SNAPC4Q5SXM2 1469 aa35.67■■■■□ 3.3
NFKBIA-202ENST00000553342 ABCA5Q8WWZ7 1642 aa35.65■■■■□ 3.3
NFKBIA-202ENST00000553342 FBLN2P98095 1184 aa35.61■■■■□ 3.29
NFKBIA-202ENST00000553342 CHD1O14646 1710 aa35.6■■■■□ 3.29
NFKBIA-202ENST00000553342 MAGI1Q96QZ7 1491 aaPredicted RBP35.6■■■■□ 3.29
NFKBIA-202ENST00000553342 PBRM1Q86U86 1689 aa35.59■■■■□ 3.29
NFKBIA-202ENST00000553342 CHMP7Q8WUX9 453 aaPredicted RBP35.48■■■■□ 3.27
NFKBIA-202ENST00000553342 SYNJ2O15056 1496 aa35.47■■■■□ 3.27
NFKBIA-202ENST00000553342 ERICH3Q5RHP9 1530 aa35.35■■■■□ 3.25
NFKBIA-202ENST00000553342 ADAMTS12P58397 1594 aa35.32■■■■□ 3.24
NFKBIA-202ENST00000553342 FHAD1B1AJZ9 1412 aa35.26■■■■□ 3.24
NFKBIA-202ENST00000553342 KIF27Q86VH2 1401 aa35.24■■■■□ 3.23
NFKBIA-202ENST00000553342 GRIN2AQ12879 1464 aa35.22■■■■□ 3.23
NFKBIA-202ENST00000553342 ARHGEF11O15085 1522 aa35.22■■■■□ 3.23
NFKBIA-202ENST00000553342 CLASP1Q7Z460 1538 aa35.22■■■■□ 3.23
NFKBIA-202ENST00000553342 RIMBP3CA6NJZ7 1639 aa35.22■■■■□ 3.23
NFKBIA-202ENST00000553342 RIMBP3BA6NNM3 1639 aa35.22■■■■□ 3.23
NFKBIA-202ENST00000553342 RIMBP3Q9UFD9 1639 aa35.22■■■■□ 3.23
NFKBIA-202ENST00000553342 TRIM41Q8WV44 630 aa35.15■■■■□ 3.22
NFKBIA-202ENST00000553342 IGF1RP08069 1367 aa35.1■■■■□ 3.21
NFKBIA-202ENST00000553342 NUP160Q12769 1436 aa35.07■■■■□ 3.21
NFKBIA-202ENST00000553342 CEP170Q5SW79 1584 aa35.05■■■■□ 3.2
NFKBIA-202ENST00000553342 CUL7Q14999 1698 aa35.01■■■■□ 3.19
NFKBIA-202ENST00000553342 ARAP1Q96P48 1450 aa34.93■■■■□ 3.18
NFKBIA-202ENST00000553342 CYB5RLQ6IPT4 315 aa34.92■■■■□ 3.18
NFKBIA-202ENST00000553342 CARMIL1Q5VZK9 1371 aa34.9■■■■□ 3.18
NFKBIA-202ENST00000553342 RUSC2Q8N2Y8 1516 aa34.89■■■■□ 3.18
NFKBIA-202ENST00000553342 SHROOM2Q13796 1616 aa34.8■■■■□ 3.16
NFKBIA-202ENST00000553342 ERCC6L2Q5T890 1561 aa34.74■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 264.5 ms