RNA–Protein interactions for RNA: ENST00000490895.5

IMP4-216, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-216ENST00000490895 NISCHQ9Y2I1 1504 aa38.1■■■■□ 3.69
IMP4-216ENST00000490895 CCDC180Q9P1Z9 1646 aa34.04■■■■□ 3.04
IMP4-216ENST00000490895 ABCC9O60706 1549 aa33.79■■■■□ 3
IMP4-216ENST00000490895 RB1CC1Q8TDY2 1594 aa32.28■■■□□ 2.76
IMP4-216ENST00000490895 NACADO15069 1562 aa32.15■■■□□ 2.74
IMP4-216ENST00000490895 DCAF8L2P0C7V8 631 aa32.01■■■□□ 2.71
IMP4-216ENST00000490895 MYO15BQ96JP2 1530 aa31.83■■■□□ 2.69
IMP4-216ENST00000490895 ZCCHC6Q5VYS8 1495 aaKnown RBP31.64■■■□□ 2.66
IMP4-216ENST00000490895 PABPN1Q86U42 306 aaKnown RBP eCLIP31.52■■■□□ 2.64
IMP4-216ENST00000490895 DCAF1Q9Y4B6 1507 aa31.51■■■□□ 2.63
IMP4-216ENST00000490895 DNAJC5BQ9UF47 199 aa31.51■■■□□ 2.63
IMP4-216ENST00000490895 UNC13AQ9UPW8 1703 aa31.5■■■□□ 2.63
IMP4-216ENST00000490895 BICRAQ9NZM4 1560 aa31.35■■■□□ 2.61
IMP4-216ENST00000490895 SCRIBQ14160 1630 aa31.02■■■□□ 2.56
IMP4-216ENST00000490895 SHROOM4Q9ULL8 1493 aa30.98■■■□□ 2.55
IMP4-216ENST00000490895 EIF4G1Q04637 1599 aaKnown RBP30.54■■■□□ 2.48
IMP4-216ENST00000490895 CC2D2AQ9P2K1 1620 aa30.53■■■□□ 2.48
IMP4-216ENST00000490895 CECR2Q9BXF3 1484 aa30.43■■■□□ 2.46
IMP4-216ENST00000490895 NCAPD3P42695 1498 aa29.7■■■□□ 2.35
IMP4-216ENST00000490895 SMARCA4P51532 1647 aa29.63■■■□□ 2.33
IMP4-216ENST00000490895 ATAD2BQ9ULI0 1458 aa29.63■■■□□ 2.33
IMP4-216ENST00000490895 SMARCA2P51531 1590 aa29.55■■■□□ 2.32
IMP4-216ENST00000490895 BAZ1AQ9NRL2 1556 aaPredicted RBP29.54■■■□□ 2.32
IMP4-216ENST00000490895 HMGXB3Q12766 1538 aa29.48■■■□□ 2.31
IMP4-216ENST00000490895 PEG3Q9GZU2 1588 aa29.38■■■□□ 2.29
IMP4-216ENST00000490895 MROH2BQ7Z745 1585 aa29.35■■■□□ 2.29
IMP4-216ENST00000490895 BAZ1BQ9UIG0 1483 aaKnown RBP29.34■■■□□ 2.29
IMP4-216ENST00000490895 ERCC6Q03468 1493 aa29.15■■■□□ 2.26
IMP4-216ENST00000490895 NESP48681 1621 aa29.11■■■□□ 2.25
IMP4-216ENST00000490895 CUX2O14529 1486 aa29.04■■■□□ 2.24
IMP4-216ENST00000490895 WIZO95785 1651 aa28.98■■■□□ 2.23
IMP4-216ENST00000490895 LAMC3Q9Y6N6 1575 aa28.95■■■□□ 2.22
IMP4-216ENST00000490895 RSF1Q96T23 1441 aaPredicted RBP28.87■■■□□ 2.21
IMP4-216ENST00000490895 CADPSQ9ULU8 1353 aa28.8■■■□□ 2.2
IMP4-216ENST00000490895 PDS5BQ9NTI5 1447 aa28.79■■■□□ 2.2
IMP4-216ENST00000490895 THOC2Q8NI27 1593 aaKnown RBP28.75■■■□□ 2.19
IMP4-216ENST00000490895 DNAJC5Q9H3Z4 198 aa28.74■■■□□ 2.19
IMP4-216ENST00000490895 KIF21AQ7Z4S6 1674 aa28.7■■■□□ 2.18
IMP4-216ENST00000490895 TOP2AP11388 1531 aaKnown RBP28.66■■■□□ 2.18
IMP4-216ENST00000490895 CFTRP13569 1480 aa28.53■■■□□ 2.16
IMP4-216ENST00000490895 MRC2Q9UBG0 1479 aa28.52■■■□□ 2.16
IMP4-216ENST00000490895 FANCD2Q9BXW9 1451 aa28.46■■■□□ 2.15
IMP4-216ENST00000490895 CEP164Q9UPV0 1460 aa28.46■■■□□ 2.15
IMP4-216ENST00000490895 WDR62O43379 1518 aa28.43■■■□□ 2.14
IMP4-216ENST00000490895 CCDC88BA6NC98 1476 aa28.34■■■□□ 2.13
IMP4-216ENST00000490895 URB2Q14146 1524 aaKnown RBP28.21■■■□□ 2.11
IMP4-216ENST00000490895 PRDM2Q13029 1718 aa28.18■■■□□ 2.1
IMP4-216ENST00000490895 TOPBP1Q92547 1522 aa27.95■■■□□ 2.06
IMP4-216ENST00000490895 ABCC8Q09428 1581 aa27.91■■■□□ 2.06
IMP4-216ENST00000490895 IFT140Q96RY7 1462 aa27.89■■■□□ 2.05
IMP4-216ENST00000490895 DNMBPQ6XZF7 1577 aa27.86■■■□□ 2.05
IMP4-216ENST00000490895 ZNF608Q9ULD9 1512 aaPredicted RBP27.82■■■□□ 2.04
IMP4-216ENST00000490895 OSCARQ8IYS5 282 aa27.77■■■□□ 2.04
IMP4-216ENST00000490895 SUPT5HO00267 1087 aaKnown RBP27.75■■■□□ 2.03
IMP4-216ENST00000490895 POLA1P09884 1462 aaPredicted RBP27.69■■■□□ 2.02
IMP4-216ENST00000490895 TARBP1Q13395 1621 aaKnown RBP27.67■■■□□ 2.02
IMP4-216ENST00000490895 EIF4G3O43432 1585 aaKnown RBP27.64■■■□□ 2.01
IMP4-216ENST00000490895 AQRO60306 1485 aaKnown RBP eCLIP27.59■■■□□ 2.015e-7■■■■■ 37.2
IMP4-216ENST00000490895 SOGA1O94964 1423 aa27.57■■■□□ 2
IMP4-216ENST00000490895 RAD54L2Q9Y4B4 1467 aa27.57■■■□□ 2
IMP4-216ENST00000490895 CUX1P39880 1505 aa27.57■■■□□ 2
IMP4-216ENST00000490895 FGD5Q6ZNL6 1462 aa27.53■■■□□ 2
IMP4-216ENST00000490895 TRIM41Q8WV44 630 aa27.53■■■□□ 2
IMP4-216ENST00000490895 TDRD9Q8NDG6 1382 aaKnown RBP27.48■■□□□ 1.99
IMP4-216ENST00000490895 WDR97A6NE52 1622 aa27.41■■□□□ 1.98
IMP4-216ENST00000490895 CHD1O14646 1710 aa27.36■■□□□ 1.97
IMP4-216ENST00000490895 FBLN2P98095 1184 aa27.34■■□□□ 1.97
IMP4-216ENST00000490895 RIMBP3CA6NJZ7 1639 aa27.33■■□□□ 1.97
IMP4-216ENST00000490895 RIMBP3BA6NNM3 1639 aa27.33■■□□□ 1.97
IMP4-216ENST00000490895 RIMBP3Q9UFD9 1639 aa27.33■■□□□ 1.97
IMP4-216ENST00000490895 SNAPC4Q5SXM2 1469 aa27.32■■□□□ 1.96
IMP4-216ENST00000490895 GRIN2BQ13224 1484 aa27.3■■□□□ 1.96
IMP4-216ENST00000490895 ARHGEF11O15085 1522 aa27.29■■□□□ 1.96
IMP4-216ENST00000490895 MAGI1Q96QZ7 1491 aaPredicted RBP27.27■■□□□ 1.96
IMP4-216ENST00000490895 ABCA10Q8WWZ4 1543 aa27.26■■□□□ 1.95
IMP4-216ENST00000490895 GAPVD1Q14C86 1478 aa27.23■■□□□ 1.95
IMP4-216ENST00000490895 CHMP7Q8WUX9 453 aaPredicted RBP27.21■■□□□ 1.95
IMP4-216ENST00000490895 WRNQ14191 1432 aaPredicted RBP eCLIP27.21■■□□□ 1.95
IMP4-216ENST00000490895 TOP2BQ02880 1626 aa27.18■■□□□ 1.94
IMP4-216ENST00000490895 ABCA5Q8WWZ7 1642 aa27.17■■□□□ 1.94
IMP4-216ENST00000490895 BIVM-ERCC5R4GMW8 1640 aa27.17■■□□□ 1.94
IMP4-216ENST00000490895 SYNJ2O15056 1496 aa27.17■■□□□ 1.94
IMP4-216ENST00000490895 SYNJ1O43426 1573 aa27.15■■□□□ 1.94
IMP4-216ENST00000490895 PBRM1Q86U86 1689 aa27.14■■□□□ 1.93
IMP4-216ENST00000490895 CLASP1Q7Z460 1538 aa27.11■■□□□ 1.93
IMP4-216ENST00000490895 CYB5RLQ6IPT4 315 aa27.09■■□□□ 1.93
IMP4-216ENST00000490895 ARAP1Q96P48 1450 aa27.06■■□□□ 1.92
IMP4-216ENST00000490895 GRIN2AQ12879 1464 aa26.93■■□□□ 1.9
IMP4-216ENST00000490895 ADAMTS12P58397 1594 aa26.93■■□□□ 1.9
IMP4-216ENST00000490895 FHAD1B1AJZ9 1412 aa26.91■■□□□ 1.9
IMP4-216ENST00000490895 ERICH3Q5RHP9 1530 aa26.91■■□□□ 1.9
IMP4-216ENST00000490895 NUP160Q12769 1436 aa26.86■■□□□ 1.89
IMP4-216ENST00000490895 CEP170Q5SW79 1584 aa26.81■■□□□ 1.88
IMP4-216ENST00000490895 ERCC6L2Q5T890 1561 aa26.69■■□□□ 1.86
IMP4-216ENST00000490895 KIF27Q86VH2 1401 aa26.68■■□□□ 1.86
IMP4-216ENST00000490895 SHROOM2Q13796 1616 aa26.68■■□□□ 1.86
IMP4-216ENST00000490895 TRHP20396 242 aaPredicted RBP26.67■■□□□ 1.86
IMP4-216ENST00000490895 IGF1RP08069 1367 aa26.67■■□□□ 1.86
IMP4-216ENST00000490895 JPH4Q96JJ6 628 aa26.59■■□□□ 1.85
IMP4-216ENST00000490895 PRG4Q92954 1404 aaPredicted RBP26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms