Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.68■■□□□ 1.06
CROCCP3Q8IVE0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.68■■□□□ 1.06
CROCCP3Q8IVE0 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CROCCP3Q8IVE0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CROCCP3Q8IVE0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CROCCP3Q8IVE0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CROCCP3Q8IVE0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.67■■□□□ 1.06
CROCCP3Q8IVE0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.66■■□□□ 1.06
CROCCP3Q8IVE0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CROCCP3Q8IVE0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CROCCP3Q8IVE0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CROCCP3Q8IVE0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.65■■□□□ 1.06
CROCCP3Q8IVE0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CROCCP3Q8IVE0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CROCCP3Q8IVE0 AP004609.3-201ENST00000610705 1884 ntBASIC21.65■■□□□ 1.06
CROCCP3Q8IVE0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CROCCP3Q8IVE0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CROCCP3Q8IVE0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.65■■□□□ 1.06
CROCCP3Q8IVE0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CROCCP3Q8IVE0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.65■■□□□ 1.06
CROCCP3Q8IVE0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CROCCP3Q8IVE0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
CROCCP3Q8IVE0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CROCCP3Q8IVE0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CROCCP3Q8IVE0 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CROCCP3Q8IVE0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CROCCP3Q8IVE0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CROCCP3Q8IVE0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CROCCP3Q8IVE0 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CROCCP3Q8IVE0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CROCCP3Q8IVE0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
CROCCP3Q8IVE0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CROCCP3Q8IVE0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CROCCP3Q8IVE0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CROCCP3Q8IVE0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CROCCP3Q8IVE0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CROCCP3Q8IVE0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.63■■□□□ 1.05
CROCCP3Q8IVE0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CROCCP3Q8IVE0 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CROCCP3Q8IVE0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CROCCP3Q8IVE0 LINC01124-201ENST00000409786 2117 ntBASIC21.62■■□□□ 1.05
CROCCP3Q8IVE0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.62■■□□□ 1.05
CROCCP3Q8IVE0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CROCCP3Q8IVE0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CROCCP3Q8IVE0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.62■■□□□ 1.05
CROCCP3Q8IVE0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CROCCP3Q8IVE0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CROCCP3Q8IVE0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CROCCP3Q8IVE0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CROCCP3Q8IVE0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CROCCP3Q8IVE0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
CROCCP3Q8IVE0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CROCCP3Q8IVE0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.61■■□□□ 1.05
CROCCP3Q8IVE0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CROCCP3Q8IVE0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CROCCP3Q8IVE0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CROCCP3Q8IVE0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CROCCP3Q8IVE0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CROCCP3Q8IVE0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CROCCP3Q8IVE0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CROCCP3Q8IVE0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CROCCP3Q8IVE0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CROCCP3Q8IVE0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CROCCP3Q8IVE0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CROCCP3Q8IVE0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CROCCP3Q8IVE0 LINC00565-201ENST00000562710 2331 ntBASIC21.6■■□□□ 1.05
CROCCP3Q8IVE0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CROCCP3Q8IVE0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CROCCP3Q8IVE0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.59■■□□□ 1.05
CROCCP3Q8IVE0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CROCCP3Q8IVE0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.59■■□□□ 1.05
CROCCP3Q8IVE0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CROCCP3Q8IVE0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CROCCP3Q8IVE0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.58■■□□□ 1.05
CROCCP3Q8IVE0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.58■■□□□ 1.05
CROCCP3Q8IVE0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CROCCP3Q8IVE0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CROCCP3Q8IVE0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CROCCP3Q8IVE0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CROCCP3Q8IVE0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CROCCP3Q8IVE0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CROCCP3Q8IVE0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CROCCP3Q8IVE0 AC135983.2-203ENST00000454486 1613 ntBASIC21.57■■□□□ 1.04
CROCCP3Q8IVE0 AC096887.2-201ENST00000623443 1957 ntBASIC21.57■■□□□ 1.04
CROCCP3Q8IVE0 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.57■■□□□ 1.04
CROCCP3Q8IVE0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CROCCP3Q8IVE0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.57■■□□□ 1.04
CROCCP3Q8IVE0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.56■■□□□ 1.04
CROCCP3Q8IVE0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CROCCP3Q8IVE0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CROCCP3Q8IVE0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.56■■□□□ 1.04
CROCCP3Q8IVE0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.56■■□□□ 1.04
CROCCP3Q8IVE0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CROCCP3Q8IVE0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CROCCP3Q8IVE0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CROCCP3Q8IVE0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CROCCP3Q8IVE0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CROCCP3Q8IVE0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.55■■□□□ 1.04
CROCCP3Q8IVE0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.55■■□□□ 1.04
CROCCP3Q8IVE0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms