RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 NISCHQ9Y2I1 1504 aa42.41■■■■■ 4.38
SPNS1-203ENST00000334536 CCDC180Q9P1Z9 1646 aa36.26■■■■□ 3.4
SPNS1-203ENST00000334536 ZCCHC6Q5VYS8 1495 aaKnown RBP35.88■■■■□ 3.33
SPNS1-203ENST00000334536 SHROOM4Q9ULL8 1493 aa35.65■■■■□ 3.3
SPNS1-203ENST00000334536 DCAF1Q9Y4B6 1507 aa35.02■■■■□ 3.2
SPNS1-203ENST00000334536 SUPT5HO00267 1087 aaKnown RBP34.98■■■■□ 3.19
SPNS1-203ENST00000334536 PELP1Q8IZL8 1130 aaKnown RBP34.79■■■■□ 3.16
SPNS1-203ENST00000334536 DCAF8L2P0C7V8 631 aa34.74■■■■□ 3.15
SPNS1-203ENST00000334536 HRCP23327 699 aa34.4■■■■□ 3.1
SPNS1-203ENST00000334536 ABCC9O60706 1549 aa34.25■■■■□ 3.07
SPNS1-203ENST00000334536 CHIC1Q5VXU3 224 aa34.18■■■■□ 3.06
SPNS1-203ENST00000334536 MYO15BQ96JP2 1530 aa34.09■■■■□ 3.05
SPNS1-203ENST00000334536 MYT1Q01538 1121 aa33.89■■■■□ 3.02
SPNS1-203ENST00000334536 NACADO15069 1562 aa33.65■■■□□ 2.98
SPNS1-203ENST00000334536 SCRIBQ14160 1630 aa33.64■■■□□ 2.98
SPNS1-203ENST00000334536 RSF1Q96T23 1441 aaPredicted RBP33.46■■■□□ 2.95
SPNS1-203ENST00000334536 RB1CC1Q8TDY2 1594 aa33.38■■■□□ 2.93
SPNS1-203ENST00000334536 PPARGC1BQ86YN6 1023 aaKnown RBP33.02■■■□□ 2.88
SPNS1-203ENST00000334536 LOC105371045A0A1W2PR82 267 aa32.95■■■□□ 2.87
SPNS1-203ENST00000334536 PCGF6Q9BYE7 350 aa32.9■■■□□ 2.86
SPNS1-203ENST00000334536 CECR2Q9BXF3 1484 aa32.9■■■□□ 2.86
SPNS1-203ENST00000334536 MROH2BQ7Z745 1585 aa32.85■■■□□ 2.85
SPNS1-203ENST00000334536 UNC13AQ9UPW8 1703 aa32.78■■■□□ 2.84
SPNS1-203ENST00000334536 TRIM41Q8WV44 630 aa32.77■■■□□ 2.84
SPNS1-203ENST00000334536 SCAF1Q9H7N4 1312 aaKnown RBP32.7■■■□□ 2.83
SPNS1-203ENST00000334536 WIZO95785 1651 aa32.63■■■□□ 2.81
SPNS1-203ENST00000334536 BAZ1AQ9NRL2 1556 aaPredicted RBP32.62■■■□□ 2.81
SPNS1-203ENST00000334536 TRIM26Q12899 539 aaPredicted RBP32.51■■■□□ 2.79
SPNS1-203ENST00000334536 ZEB1P37275 1124 aaPredicted RBP32.42■■■□□ 2.78
SPNS1-203ENST00000334536 BICRAQ9NZM4 1560 aa32.41■■■□□ 2.78
SPNS1-203ENST00000334536 PABPN1Q86U42 306 aaKnown RBP eCLIP32.32■■■□□ 2.76
SPNS1-203ENST00000334536 EIF4G1Q04637 1599 aaKnown RBP32.32■■■□□ 2.76
SPNS1-203ENST00000334536 TOP2AP11388 1531 aaKnown RBP32.31■■■□□ 2.76
SPNS1-203ENST00000334536 SMARCA4P51532 1647 aa32.3■■■□□ 2.76
SPNS1-203ENST00000334536 FAM9AQ8IZU1 332 aaPredicted RBP32.25■■■□□ 2.75
SPNS1-203ENST00000334536 TTBK1Q5TCY1 1321 aaPredicted RBP32.16■■■□□ 2.74
SPNS1-203ENST00000334536 SMARCA2P51531 1590 aa32.06■■■□□ 2.72
SPNS1-203ENST00000334536 CCDC88BA6NC98 1476 aa32.05■■■□□ 2.72
SPNS1-203ENST00000334536 ACIN1Q9UKV3 1341 aaKnown RBP31.9■■■□□ 2.7
SPNS1-203ENST00000334536 PEG3Q9GZU2 1588 aa31.82■■■□□ 2.68
SPNS1-203ENST00000334536 ABCC8Q09428 1581 aa31.8■■■□□ 2.68
SPNS1-203ENST00000334536 EHMT2Q96KQ7 1210 aa31.76■■■□□ 2.68
SPNS1-203ENST00000334536 EEA1Q15075 1411 aa31.69■■■□□ 2.66
SPNS1-203ENST00000334536 WRNQ14191 1432 aaPredicted RBP eCLIP31.54■■■□□ 2.64
SPNS1-203ENST00000334536 CENPBP07199 599 aaPredicted RBP31.53■■■□□ 2.64
SPNS1-203ENST00000334536 SOGA1O94964 1423 aa31.51■■■□□ 2.64
SPNS1-203ENST00000334536 NEUROD1Q13562 356 aa31.51■■■□□ 2.64
SPNS1-203ENST00000334536 TNIKQ9UKE5 1360 aa31.51■■■□□ 2.63
SPNS1-203ENST00000334536 ATAD2BQ9ULI0 1458 aa31.47■■■□□ 2.63
SPNS1-203ENST00000334536 CSRNP3Q8WYN3 585 aa31.44■■■□□ 2.62
SPNS1-203ENST00000334536 GTF3C3Q9Y5Q9 886 aa31.43■■■□□ 2.62
SPNS1-203ENST00000334536 CEP162Q5TB80 1403 aa31.42■■■□□ 2.62
SPNS1-203ENST00000334536 BAZ1BQ9UIG0 1483 aaKnown RBP31.37■■■□□ 2.61
SPNS1-203ENST00000334536 GOLGA3Q08378 1498 aa31.32■■■□□ 2.6
SPNS1-203ENST00000334536 RUSC2Q8N2Y8 1516 aa31.32■■■□□ 2.6
SPNS1-203ENST00000334536 SYNJ1O43426 1573 aa31.23■■■□□ 2.59
SPNS1-203ENST00000334536 UBTFP17480 764 aaKnown RBP31.18■■■□□ 2.58
SPNS1-203ENST00000334536 KIF21BO75037 1637 aa31.17■■■□□ 2.58
SPNS1-203ENST00000334536 CEP164Q9UPV0 1460 aa31.17■■■□□ 2.58
SPNS1-203ENST00000334536 NCAPD3P42695 1498 aa31.06■■■□□ 2.56
SPNS1-203ENST00000334536 HMGXB3Q12766 1538 aa31.03■■■□□ 2.56
SPNS1-203ENST00000334536 CCER1Q8TC90 406 aaPredicted RBP31.01■■■□□ 2.55
SPNS1-203ENST00000334536 TOP2BQ02880 1626 aa30.98■■■□□ 2.55
SPNS1-203ENST00000334536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.98■■■□□ 2.55
SPNS1-203ENST00000334536 CC2D2AQ9P2K1 1620 aa30.97■■■□□ 2.55
SPNS1-203ENST00000334536 BIVM-ERCC5R4GMW8 1640 aa30.91■■■□□ 2.54
SPNS1-203ENST00000334536 CLIP1P30622 1438 aa30.88■■■□□ 2.53
SPNS1-203ENST00000334536 DIEXFQ68CQ4 756 aaKnown RBP30.84■■■□□ 2.53
SPNS1-203ENST00000334536 BCL11AQ9H165 835 aa30.83■■■□□ 2.53
SPNS1-203ENST00000334536 RAPGEF2Q9Y4G8 1499 aa30.79■■■□□ 2.52
SPNS1-203ENST00000334536 VPS8Q8N3P4 1428 aa30.79■■■□□ 2.52
SPNS1-203ENST00000334536 ERICH3Q5RHP9 1530 aa30.72■■■□□ 2.51
SPNS1-203ENST00000334536 PRXQ9BXM0 1461 aa30.65■■■□□ 2.5
SPNS1-203ENST00000334536 CFTRP13569 1480 aa30.65■■■□□ 2.5
SPNS1-203ENST00000334536 CUX1P39880 1505 aa30.62■■■□□ 2.49
SPNS1-203ENST00000334536 APLP2Q06481 763 aa30.58■■■□□ 2.49
SPNS1-203ENST00000334536 CLSPNQ9HAW4 1339 aa30.57■■■□□ 2.48
SPNS1-203ENST00000334536 ANP32EQ9BTT0 268 aa30.55■■■□□ 2.48
SPNS1-203ENST00000334536 KIF27Q86VH2 1401 aa30.53■■■□□ 2.48
SPNS1-203ENST00000334536 PRDM2Q13029 1718 aa30.47■■■□□ 2.47
SPNS1-203ENST00000334536 ARAP1Q96P48 1450 aa30.4■■■□□ 2.46
SPNS1-203ENST00000334536 HNRNPUL2Q1KMD3 747 aaKnown RBP30.35■■■□□ 2.45
SPNS1-203ENST00000334536 CADPSQ9ULU8 1353 aa30.3■■■□□ 2.44
SPNS1-203ENST00000334536 RANGAP1P46060 587 aaPredicted RBP30.29■■■□□ 2.44
SPNS1-203ENST00000334536 ZNF316A6NFI3 1004 aaPredicted RBP30.27■■■□□ 2.44
SPNS1-203ENST00000334536 DNAJC5BQ9UF47 199 aa30.25■■■□□ 2.43
SPNS1-203ENST00000334536 CUX2O14529 1486 aa30.15■■■□□ 2.42
SPNS1-203ENST00000334536 IGF1RP08069 1367 aa30.15■■■□□ 2.42
SPNS1-203ENST00000334536 ARHGAP35Q9NRY4 1499 aa30.15■■■□□ 2.42
SPNS1-203ENST00000334536 PRKCSHP14314 528 aaPredicted RBP30.12■■■□□ 2.41
SPNS1-203ENST00000334536 RRBP1Q9P2E9 1410 aaKnown RBP30.1■■■□□ 2.41
SPNS1-203ENST00000334536 NESP48681 1621 aa30.09■■■□□ 2.41
SPNS1-203ENST00000334536 FGD5Q6ZNL6 1462 aa30.08■■■□□ 2.41
SPNS1-203ENST00000334536 KANK4Q5T7N3 995 aaPredicted RBP30.07■■■□□ 2.4
SPNS1-203ENST00000334536 CARMIL1Q5VZK9 1371 aa30.02■■■□□ 2.4
SPNS1-203ENST00000334536 ERICH6Q7L0X2 663 aa30.01■■■□□ 2.4
SPNS1-203ENST00000334536 LAMC3Q9Y6N6 1575 aa30.01■■■□□ 2.39
SPNS1-203ENST00000334536 MAP3K1Q13233 1512 aa30.01■■■□□ 2.39
SPNS1-203ENST00000334536 YTHDC1Q96MU7 727 aaKnown RBP29.98■■■□□ 2.39
SPNS1-203ENST00000334536 FANCD2Q9BXW9 1451 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 453.5 ms