RNA–Protein interactions for RNA: ENST00000533177.5

UBTF-213, Transcript of upstream binding transcription factor, humanhuman

TSL 5 BASIC

Gene UBTF, Length 3,011 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-213ENST00000533177 NISCHQ9Y2I1 1504 aa45.68■■■■■ 4.9
UBTF-213ENST00000533177 SHROOM4Q9ULL8 1493 aa38.96■■■■□ 3.83
UBTF-213ENST00000533177 CCDC180Q9P1Z9 1646 aa38.9■■■■□ 3.82
UBTF-213ENST00000533177 ZCCHC6Q5VYS8 1495 aaKnown RBP38.53■■■■□ 3.76
UBTF-213ENST00000533177 DCAF8L2P0C7V8 631 aa38.36■■■■□ 3.73
UBTF-213ENST00000533177 SUPT5HO00267 1087 aaKnown RBP37.97■■■■□ 3.67
UBTF-213ENST00000533177 DCAF1Q9Y4B6 1507 aa37.3■■■■□ 3.56
UBTF-213ENST00000533177 ABCC9O60706 1549 aa36.73■■■■□ 3.47
UBTF-213ENST00000533177 SCRIBQ14160 1630 aa36.66■■■■□ 3.46
UBTF-213ENST00000533177 CHIC1Q5VXU3 224 aa36.56■■■■□ 3.44
UBTF-213ENST00000533177 MYO15BQ96JP2 1530 aa36.37■■■■□ 3.41
UBTF-213ENST00000533177 NACADO15069 1562 aa36.11■■■■□ 3.37
UBTF-213ENST00000533177 RSF1Q96T23 1441 aaPredicted RBP36.04■■■■□ 3.36
UBTF-213ENST00000533177 CECR2Q9BXF3 1484 aa35.81■■■■□ 3.32
UBTF-213ENST00000533177 HRCP23327 699 aa35.76■■■■□ 3.32
UBTF-213ENST00000533177 RB1CC1Q8TDY2 1594 aa35.66■■■■□ 3.3
UBTF-213ENST00000533177 LOC105371045A0A1W2PR82 267 aa35.62■■■■□ 3.29
UBTF-213ENST00000533177 PCGF6Q9BYE7 350 aa35.61■■■■□ 3.29
UBTF-213ENST00000533177 MROH2BQ7Z745 1585 aa35.59■■■■□ 3.29
UBTF-213ENST00000533177 WIZO95785 1651 aa35.39■■■■□ 3.26
UBTF-213ENST00000533177 PPARGC1BQ86YN6 1023 aaKnown RBP35.32■■■■□ 3.25
UBTF-213ENST00000533177 TRIM41Q8WV44 630 aa35.27■■■■□ 3.24
UBTF-213ENST00000533177 UNC13AQ9UPW8 1703 aa35.23■■■■□ 3.23
UBTF-213ENST00000533177 FAM9AQ8IZU1 332 aaPredicted RBP35.16■■■■□ 3.22
UBTF-213ENST00000533177 PABPN1Q86U42 306 aaKnown RBP eCLIP35.14■■■■□ 3.22
UBTF-213ENST00000533177 BAZ1AQ9NRL2 1556 aaPredicted RBP35.08■■■■□ 3.21
UBTF-213ENST00000533177 EHMT2Q96KQ7 1210 aa35.02■■■■□ 3.2
UBTF-213ENST00000533177 SMARCA4P51532 1647 aa34.89■■■■□ 3.18
UBTF-213ENST00000533177 BICRAQ9NZM4 1560 aa34.79■■■■□ 3.16
UBTF-213ENST00000533177 TOP2AP11388 1531 aaKnown RBP34.69■■■■□ 3.14
UBTF-213ENST00000533177 CCDC88BA6NC98 1476 aa34.64■■■■□ 3.14
UBTF-213ENST00000533177 EIF4G1Q04637 1599 aaKnown RBP34.58■■■■□ 3.13
UBTF-213ENST00000533177 SMARCA2P51531 1590 aa34.55■■■■□ 3.12
UBTF-213ENST00000533177 ABCC8Q09428 1581 aa34.51■■■■□ 3.11
UBTF-213ENST00000533177 TRIM26Q12899 539 aaPredicted RBP34.42■■■■□ 3.1
UBTF-213ENST00000533177 PEG3Q9GZU2 1588 aa34.12■■■■□ 3.05
UBTF-213ENST00000533177 ATAD2BQ9ULI0 1458 aa34.12■■■■□ 3.05
UBTF-213ENST00000533177 SOGA1O94964 1423 aa34.08■■■■□ 3.05
UBTF-213ENST00000533177 BAZ1BQ9UIG0 1483 aaKnown RBP34.02■■■■□ 3.04
UBTF-213ENST00000533177 RUSC2Q8N2Y8 1516 aa33.98■■■■□ 3.03
UBTF-213ENST00000533177 WRNQ14191 1432 aaPredicted RBP eCLIP33.86■■■■□ 3.01
UBTF-213ENST00000533177 ZEB1P37275 1124 aaPredicted RBP33.82■■■■□ 3
UBTF-213ENST00000533177 CSRNP3Q8WYN3 585 aa33.78■■■■□ 3
UBTF-213ENST00000533177 SYNJ1O43426 1573 aa33.75■■■□□ 2.99
UBTF-213ENST00000533177 TTBK1Q5TCY1 1321 aaPredicted RBP33.74■■■□□ 2.99
UBTF-213ENST00000533177 UBTFP17480 764 aaKnown RBP33.71■■■□□ 2.99
UBTF-213ENST00000533177 CEP162Q5TB80 1403 aa33.64■■■□□ 2.98
UBTF-213ENST00000533177 EEA1Q15075 1411 aa33.56■■■□□ 2.96
UBTF-213ENST00000533177 SCAF1Q9H7N4 1312 aaKnown RBP33.55■■■□□ 2.96
UBTF-213ENST00000533177 TNIKQ9UKE5 1360 aa33.53■■■□□ 2.96
UBTF-213ENST00000533177 NCAPD3P42695 1498 aa33.46■■■□□ 2.95
UBTF-213ENST00000533177 GOLGA3Q08378 1498 aa33.43■■■□□ 2.94
UBTF-213ENST00000533177 HMGXB3Q12766 1538 aa33.38■■■□□ 2.93
UBTF-213ENST00000533177 RANGAP1P46060 587 aaPredicted RBP33.37■■■□□ 2.93
UBTF-213ENST00000533177 PELP1Q8IZL8 1130 aaKnown RBP33.32■■■□□ 2.92
UBTF-213ENST00000533177 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.27■■■□□ 2.92
UBTF-213ENST00000533177 CEP164Q9UPV0 1460 aa33.27■■■□□ 2.92
UBTF-213ENST00000533177 TOP2BQ02880 1626 aa33.27■■■□□ 2.92
UBTF-213ENST00000533177 RAPGEF2Q9Y4G8 1499 aa33.23■■■□□ 2.91
UBTF-213ENST00000533177 KIF21BO75037 1637 aa33.18■■■□□ 2.9
UBTF-213ENST00000533177 CCER1Q8TC90 406 aaPredicted RBP33.14■■■□□ 2.9
UBTF-213ENST00000533177 CUX1P39880 1505 aa33.13■■■□□ 2.89
UBTF-213ENST00000533177 BIVM-ERCC5R4GMW8 1640 aa33.12■■■□□ 2.89
UBTF-213ENST00000533177 CFTRP13569 1480 aa33.11■■■□□ 2.89
UBTF-213ENST00000533177 CLIP1P30622 1438 aa33.1■■■□□ 2.89
UBTF-213ENST00000533177 CC2D2AQ9P2K1 1620 aa32.97■■■□□ 2.87
UBTF-213ENST00000533177 NEUROD1Q13562 356 aa32.92■■■□□ 2.86
UBTF-213ENST00000533177 ACIN1Q9UKV3 1341 aaKnown RBP32.88■■■□□ 2.85
UBTF-213ENST00000533177 CADPSQ9ULU8 1353 aa32.86■■■□□ 2.85
UBTF-213ENST00000533177 VPS8Q8N3P4 1428 aa32.85■■■□□ 2.85
UBTF-213ENST00000533177 PRXQ9BXM0 1461 aa32.85■■■□□ 2.85
UBTF-213ENST00000533177 KIF27Q86VH2 1401 aa32.82■■■□□ 2.84
UBTF-213ENST00000533177 DIEXFQ68CQ4 756 aaKnown RBP32.77■■■□□ 2.84
UBTF-213ENST00000533177 HNRNPUL2Q1KMD3 747 aaKnown RBP32.77■■■□□ 2.84
UBTF-213ENST00000533177 APLP2Q06481 763 aa32.76■■■□□ 2.83
UBTF-213ENST00000533177 PRDM2Q13029 1718 aa32.73■■■□□ 2.83
UBTF-213ENST00000533177 ERICH3Q5RHP9 1530 aa32.71■■■□□ 2.83
UBTF-213ENST00000533177 GTF3C3Q9Y5Q9 886 aa32.71■■■□□ 2.83
UBTF-213ENST00000533177 CUX2O14529 1486 aa32.68■■■□□ 2.82
UBTF-213ENST00000533177 FGD5Q6ZNL6 1462 aa32.62■■■□□ 2.81
UBTF-213ENST00000533177 NESP48681 1621 aa32.62■■■□□ 2.81
UBTF-213ENST00000533177 ARAP1Q96P48 1450 aa32.62■■■□□ 2.81
UBTF-213ENST00000533177 CENPBP07199 599 aaPredicted RBP32.6■■■□□ 2.81
UBTF-213ENST00000533177 FANCD2Q9BXW9 1451 aa32.57■■■□□ 2.8
UBTF-213ENST00000533177 IGF1RP08069 1367 aa32.56■■■□□ 2.8
UBTF-213ENST00000533177 DNAJC5BQ9UF47 199 aa32.56■■■□□ 2.8
UBTF-213ENST00000533177 KANK4Q5T7N3 995 aaPredicted RBP32.52■■■□□ 2.8
UBTF-213ENST00000533177 RAD54L2Q9Y4B4 1467 aa32.43■■■□□ 2.78
UBTF-213ENST00000533177 YTHDC1Q96MU7 727 aaKnown RBP32.42■■■□□ 2.78
UBTF-213ENST00000533177 ARHGAP35Q9NRY4 1499 aa32.42■■■□□ 2.78
UBTF-213ENST00000533177 CARMIL1Q5VZK9 1371 aa32.42■■■□□ 2.78
UBTF-213ENST00000533177 TOPBP1Q92547 1522 aa32.3■■■□□ 2.76
UBTF-213ENST00000533177 P3H3Q8IVL6 736 aa32.3■■■□□ 2.76
UBTF-213ENST00000533177 POLA1P09884 1462 aaPredicted RBP32.28■■■□□ 2.76
UBTF-213ENST00000533177 DNMBPQ6XZF7 1577 aa32.26■■■□□ 2.76
UBTF-213ENST00000533177 ZNF316A6NFI3 1004 aaPredicted RBP32.24■■■□□ 2.75
UBTF-213ENST00000533177 URB2Q14146 1524 aaKnown RBP32.15■■■□□ 2.74
UBTF-213ENST00000533177 ITGAEP38570 1179 aa32.14■■■□□ 2.74
UBTF-213ENST00000533177 ABCA10Q8WWZ4 1543 aa32.13■■■□□ 2.73
UBTF-213ENST00000533177 ATP1B4Q9UN42 357 aaPredicted RBP32.12■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms