RNA–Protein interactions for RNA: ENST00000610705.1

AP004609.3-201, humanhuman

BASIC

Gene AP004609.3, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.3-201ENST00000610705 NISCHQ9Y2I1 1504 aa55.95■■■■■ 6.55
AP004609.3-201ENST00000610705 CCDC180Q9P1Z9 1646 aa48.81■■■■■ 5.4
AP004609.3-201ENST00000610705 ZCCHC6Q5VYS8 1495 aaKnown RBP46.98■■■■■ 5.11
AP004609.3-201ENST00000610705 DCAF8L2P0C7V8 631 aa46.39■■■■■ 5.02
AP004609.3-201ENST00000610705 ABCC9O60706 1549 aa46.32■■■■■ 5.01
AP004609.3-201ENST00000610705 DCAF1Q9Y4B6 1507 aa46.22■■■■■ 4.99
AP004609.3-201ENST00000610705 SHROOM4Q9ULL8 1493 aa45.71■■■■■ 4.91
AP004609.3-201ENST00000610705 MYO15BQ96JP2 1530 aa45.69■■■■■ 4.91
AP004609.3-201ENST00000610705 NACADO15069 1562 aa45.5■■■■■ 4.87
AP004609.3-201ENST00000610705 RB1CC1Q8TDY2 1594 aa45.15■■■■■ 4.82
AP004609.3-201ENST00000610705 SCRIBQ14160 1630 aa44.96■■■■■ 4.79
AP004609.3-201ENST00000610705 UNC13AQ9UPW8 1703 aa44.2■■■■■ 4.67
AP004609.3-201ENST00000610705 SUPT5HO00267 1087 aaKnown RBP43.94■■■■■ 4.62
AP004609.3-201ENST00000610705 BICRAQ9NZM4 1560 aa43.76■■■■■ 4.6
AP004609.3-201ENST00000610705 PABPN1Q86U42 306 aaKnown RBP eCLIP43.69■■■■■ 4.58
AP004609.3-201ENST00000610705 CECR2Q9BXF3 1484 aa43.51■■■■■ 4.56
AP004609.3-201ENST00000610705 RSF1Q96T23 1441 aaPredicted RBP43.39■■■■■ 4.54
AP004609.3-201ENST00000610705 MROH2BQ7Z745 1585 aa43.25■■■■■ 4.51
AP004609.3-201ENST00000610705 BAZ1AQ9NRL2 1556 aaPredicted RBP43.23■■■■■ 4.51
AP004609.3-201ENST00000610705 SMARCA4P51532 1647 aa43.05■■■■■ 4.48
AP004609.3-201ENST00000610705 WIZO95785 1651 aa42.9■■■■■ 4.46
AP004609.3-201ENST00000610705 EIF4G1Q04637 1599 aaKnown RBP42.47■■■■■ 4.39
AP004609.3-201ENST00000610705 PEG3Q9GZU2 1588 aa42.47■■■■■ 4.39
AP004609.3-201ENST00000610705 TOP2AP11388 1531 aaKnown RBP42.44■■■■■ 4.38
AP004609.3-201ENST00000610705 ATAD2BQ9ULI0 1458 aa42.36■■■■■ 4.37
AP004609.3-201ENST00000610705 SMARCA2P51531 1590 aa42.34■■■■■ 4.37
AP004609.3-201ENST00000610705 BAZ1BQ9UIG0 1483 aaKnown RBP42.15■■■■■ 4.34
AP004609.3-201ENST00000610705 CCDC88BA6NC98 1476 aa42.02■■■■■ 4.32
AP004609.3-201ENST00000610705 NCAPD3P42695 1498 aa41.99■■■■■ 4.31
AP004609.3-201ENST00000610705 CHIC1Q5VXU3 224 aa41.96■■■■■ 4.31
AP004609.3-201ENST00000610705 HMGXB3Q12766 1538 aa41.92■■■■■ 4.3
AP004609.3-201ENST00000610705 CC2D2AQ9P2K1 1620 aa41.88■■■■■ 4.29
AP004609.3-201ENST00000610705 TRIM41Q8WV44 630 aa41.3■■■■■ 4.2
AP004609.3-201ENST00000610705 ABCC8Q09428 1581 aa41.13■■■■■ 4.18
AP004609.3-201ENST00000610705 CFTRP13569 1480 aa41.04■■■■■ 4.16
AP004609.3-201ENST00000610705 CADPSQ9ULU8 1353 aa40.94■■■■■ 4.14
AP004609.3-201ENST00000610705 DNAJC5BQ9UF47 199 aa40.88■■■■■ 4.14
AP004609.3-201ENST00000610705 WRNQ14191 1432 aaPredicted RBP eCLIP40.87■■■■■ 4.13
AP004609.3-201ENST00000610705 PRDM2Q13029 1718 aa40.81■■■■■ 4.12
AP004609.3-201ENST00000610705 SYNJ1O43426 1573 aa40.69■■■■■ 4.1
AP004609.3-201ENST00000610705 NESP48681 1621 aa40.62■■■■■ 4.09
AP004609.3-201ENST00000610705 FAM9AQ8IZU1 332 aaPredicted RBP40.59■■■■■ 4.09
AP004609.3-201ENST00000610705 LAMC3Q9Y6N6 1575 aa40.59■■■■■ 4.09
AP004609.3-201ENST00000610705 TOP2BQ02880 1626 aa40.52■■■■■ 4.08
AP004609.3-201ENST00000610705 FANCD2Q9BXW9 1451 aa40.5■■■■■ 4.07
AP004609.3-201ENST00000610705 BIVM-ERCC5R4GMW8 1640 aa40.47■■■■■ 4.07
AP004609.3-201ENST00000610705 CUX1P39880 1505 aa40.44■■■■■ 4.06
AP004609.3-201ENST00000610705 LOC105371045A0A1W2PR82 267 aa40.38■■■■■ 4.05
AP004609.3-201ENST00000610705 SOGA1O94964 1423 aa40.34■■■■■ 4.05
AP004609.3-201ENST00000610705 PDS5BQ9NTI5 1447 aa40.31■■■■■ 4.04
AP004609.3-201ENST00000610705 CEP164Q9UPV0 1460 aa40.26■■■■■ 4.04
AP004609.3-201ENST00000610705 EEA1Q15075 1411 aa40.22■■■■■ 4.03
AP004609.3-201ENST00000610705 RUSC2Q8N2Y8 1516 aa40.19■■■■■ 4.02
AP004609.3-201ENST00000610705 KIF21AQ7Z4S6 1674 aa40.11■■■■■ 4.01
AP004609.3-201ENST00000610705 DNMBPQ6XZF7 1577 aa40.11■■■■■ 4.01
AP004609.3-201ENST00000610705 EHMT2Q96KQ7 1210 aa40.07■■■■■ 4
AP004609.3-201ENST00000610705 CSRNP3Q8WYN3 585 aa40.05■■■■■ 4
AP004609.3-201ENST00000610705 TOPBP1Q92547 1522 aa40.04■■■■■ 4
AP004609.3-201ENST00000610705 FGD5Q6ZNL6 1462 aa40.03■■■■■ 4
AP004609.3-201ENST00000610705 URB2Q14146 1524 aaKnown RBP39.98■■■■□ 3.99
AP004609.3-201ENST00000610705 KIF27Q86VH2 1401 aa39.85■■■■□ 3.97
AP004609.3-201ENST00000610705 POLA1P09884 1462 aaPredicted RBP39.84■■■■□ 3.97
AP004609.3-201ENST00000610705 MRC2Q9UBG0 1479 aa39.79■■■■□ 3.96
AP004609.3-201ENST00000610705 CUX2O14529 1486 aa39.78■■■■□ 3.96
AP004609.3-201ENST00000610705 ERCC6Q03468 1493 aa39.75■■■■□ 3.95
AP004609.3-201ENST00000610705 RAD54L2Q9Y4B4 1467 aa39.74■■■■□ 3.95
AP004609.3-201ENST00000610705 KIF21BO75037 1637 aa39.7■■■■□ 3.95
AP004609.3-201ENST00000610705 GOLGA3Q08378 1498 aa39.69■■■■□ 3.94
AP004609.3-201ENST00000610705 ABCA10Q8WWZ4 1543 aa39.65■■■■□ 3.94
AP004609.3-201ENST00000610705 UBTFP17480 764 aaKnown RBP39.58■■■■□ 3.93
AP004609.3-201ENST00000610705 WDR62O43379 1518 aa39.56■■■■□ 3.92
AP004609.3-201ENST00000610705 TNIKQ9UKE5 1360 aa39.53■■■■□ 3.92
AP004609.3-201ENST00000610705 PRXQ9BXM0 1461 aa39.52■■■■□ 3.92
AP004609.3-201ENST00000610705 RAPGEF2Q9Y4G8 1499 aa39.52■■■■□ 3.92
AP004609.3-201ENST00000610705 WDR97A6NE52 1622 aa39.51■■■■□ 3.92
AP004609.3-201ENST00000610705 IGF1RP08069 1367 aa39.48■■■■□ 3.91
AP004609.3-201ENST00000610705 THOC2Q8NI27 1593 aaKnown RBP39.46■■■■□ 3.91
AP004609.3-201ENST00000610705 ERICH3Q5RHP9 1530 aa39.44■■■■□ 3.9
AP004609.3-201ENST00000610705 TARBP1Q13395 1621 aaKnown RBP39.42■■■■□ 3.9
AP004609.3-201ENST00000610705 TDRD9Q8NDG6 1382 aaKnown RBP39.37■■■■□ 3.89
AP004609.3-201ENST00000610705 CEP162Q5TB80 1403 aa39.34■■■■□ 3.89
AP004609.3-201ENST00000610705 ABCA5Q8WWZ7 1642 aa39.33■■■■□ 3.89
AP004609.3-201ENST00000610705 CARMIL1Q5VZK9 1371 aa39.31■■■■□ 3.88
AP004609.3-201ENST00000610705 GAPVD1Q14C86 1478 aa39.29■■■■□ 3.88
AP004609.3-201ENST00000610705 IFT140Q96RY7 1462 aa39.29■■■■□ 3.88
AP004609.3-201ENST00000610705 CUL7Q14999 1698 aa39.19■■■■□ 3.86
AP004609.3-201ENST00000610705 AQRO60306 1485 aaKnown RBP eCLIP39.12■■■■□ 3.85
AP004609.3-201ENST00000610705 ZNF608Q9ULD9 1512 aaPredicted RBP39.08■■■■□ 3.85
AP004609.3-201ENST00000610705 CLIP1P30622 1438 aa39.07■■■■□ 3.84
AP004609.3-201ENST00000610705 PBRM1Q86U86 1689 aa39.06■■■■□ 3.84
AP004609.3-201ENST00000610705 RANGAP1P46060 587 aaPredicted RBP39.02■■■■□ 3.84
AP004609.3-201ENST00000610705 GRIN2BQ13224 1484 aa38.99■■■■□ 3.83
AP004609.3-201ENST00000610705 EIF4G3O43432 1585 aaKnown RBP38.95■■■■□ 3.83
AP004609.3-201ENST00000610705 FHAD1B1AJZ9 1412 aa38.85■■■■□ 3.81
AP004609.3-201ENST00000610705 ADAMTS12P58397 1594 aa38.84■■■■□ 3.81
AP004609.3-201ENST00000610705 SNAPC4Q5SXM2 1469 aa38.76■■■■□ 3.8
AP004609.3-201ENST00000610705 CTTNBP2Q8WZ74 1663 aa38.74■■■■□ 3.79
AP004609.3-201ENST00000610705 VPS8Q8N3P4 1428 aa38.69■■■■□ 3.78
AP004609.3-201ENST00000610705 ARHGAP35Q9NRY4 1499 aa38.68■■■■□ 3.78
AP004609.3-201ENST00000610705 ARAP1Q96P48 1450 aa38.67■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms