RNA–Protein interactions for RNA: ENST00000262305.8

RAB11FIP3-201, Transcript of RAB11 family interacting protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RAB11FIP3, Length 4,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-201ENST00000262305 NISCHQ9Y2I1 1504 aa38.57■■■■□ 3.76
RAB11FIP3-201ENST00000262305 DCAF8L2P0C7V8 631 aa38.46■■■■□ 3.75
RAB11FIP3-201ENST00000262305 SUPT5HO00267 1087 aaKnown RBP36.7■■■■□ 3.46
RAB11FIP3-201ENST00000262305 SHROOM4Q9ULL8 1493 aa36.31■■■■□ 3.4
RAB11FIP3-201ENST00000262305 EHMT2Q96KQ7 1210 aa34.96■■■■□ 3.19
RAB11FIP3-201ENST00000262305 FAM9AQ8IZU1 332 aaPredicted RBP34.46■■■■□ 3.11
RAB11FIP3-201ENST00000262305 APLP2Q06481 763 aa34.4■■■■□ 3.1
RAB11FIP3-201ENST00000262305 TRIM41Q8WV44 630 aa34.12■■■■□ 3.05
RAB11FIP3-201ENST00000262305 PCGF6Q9BYE7 350 aa33.99■■■■□ 3.03
RAB11FIP3-201ENST00000262305 TTBK1Q5TCY1 1321 aaPredicted RBP33.77■■■■□ 3
RAB11FIP3-201ENST00000262305 RANGAP1P46060 587 aaPredicted RBP33.56■■■□□ 2.96
RAB11FIP3-201ENST00000262305 UBTFP17480 764 aaKnown RBP33.51■■■□□ 2.95
RAB11FIP3-201ENST00000262305 ZEB1P37275 1124 aaPredicted RBP33.42■■■□□ 2.94
RAB11FIP3-201ENST00000262305 PELP1Q8IZL8 1130 aaKnown RBP33.4■■■□□ 2.94
RAB11FIP3-201ENST00000262305 CCER1Q8TC90 406 aaPredicted RBP33.27■■■□□ 2.92
RAB11FIP3-201ENST00000262305 ATP1B4Q9UN42 357 aaPredicted RBP33.2■■■□□ 2.9
RAB11FIP3-201ENST00000262305 CHIC1Q5VXU3 224 aa33.1■■■□□ 2.89
RAB11FIP3-201ENST00000262305 TRIM26Q12899 539 aaPredicted RBP32.86■■■□□ 2.85
RAB11FIP3-201ENST00000262305 CENPBP07199 599 aaPredicted RBP32.82■■■□□ 2.84
RAB11FIP3-201ENST00000262305 PPARGC1BQ86YN6 1023 aaKnown RBP32.81■■■□□ 2.84
RAB11FIP3-201ENST00000262305 ABCC9O60706 1549 aa32.81■■■□□ 2.84
RAB11FIP3-201ENST00000262305 LOC105371045A0A1W2PR82 267 aa32.78■■■□□ 2.84
RAB11FIP3-201ENST00000262305 PABPN1Q86U42 306 aaKnown RBP eCLIP32.44■■■□□ 2.785e-7■■■■□ 21.5
RAB11FIP3-201ENST00000262305 HRCP23327 699 aa32.42■■■□□ 2.78
RAB11FIP3-201ENST00000262305 ITGAEP38570 1179 aa32.22■■■□□ 2.75
RAB11FIP3-201ENST00000262305 HNRNPUL2Q1KMD3 747 aaKnown RBP32.15■■■□□ 2.74
RAB11FIP3-201ENST00000262305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.14■■■□□ 2.74
RAB11FIP3-201ENST00000262305 YTHDC1Q96MU7 727 aaKnown RBP32.11■■■□□ 2.73
RAB11FIP3-201ENST00000262305 NEFLP07196 543 aa32.01■■■□□ 2.71
RAB11FIP3-201ENST00000262305 ZCCHC6Q5VYS8 1495 aaKnown RBP32■■■□□ 2.71
RAB11FIP3-201ENST00000262305 ERICH6Q7L0X2 663 aa31.8■■■□□ 2.68
RAB11FIP3-201ENST00000262305 MYT1LQ9UL68 1186 aa31.74■■■□□ 2.67
RAB11FIP3-201ENST00000262305 CCDC180Q9P1Z9 1646 aa31.71■■■□□ 2.67
RAB11FIP3-201ENST00000262305 SCRIBQ14160 1630 aa31.61■■■□□ 2.65
RAB11FIP3-201ENST00000262305 FAM50AQ14320 339 aaKnown RBP31.57■■■□□ 2.64
RAB11FIP3-201ENST00000262305 CSRNP3Q8WYN3 585 aa31.55■■■□□ 2.64
RAB11FIP3-201ENST00000262305 POLR3GLQ9BT43 218 aa31.54■■■□□ 2.64
RAB11FIP3-201ENST00000262305 DIEXFQ68CQ4 756 aaKnown RBP31.4■■■□□ 2.62
RAB11FIP3-201ENST00000262305 TRIM52Q96A61 297 aa31.27■■■□□ 2.6
RAB11FIP3-201ENST00000262305 CNGB1Q14028 1251 aaPredicted RBP31.17■■■□□ 2.58
RAB11FIP3-201ENST00000262305 FBLN2P98095 1184 aa31.15■■■□□ 2.58
RAB11FIP3-201ENST00000262305 NEUROD1Q13562 356 aa31.15■■■□□ 2.58
RAB11FIP3-201ENST00000262305 P3H3Q8IVL6 736 aa31.08■■■□□ 2.57
RAB11FIP3-201ENST00000262305 RB1CC1Q8TDY2 1594 aa30.95■■■□□ 2.54
RAB11FIP3-201ENST00000262305 DCAF1Q9Y4B6 1507 aa30.93■■■□□ 2.54
RAB11FIP3-201ENST00000262305 ZNF316A6NFI3 1004 aaPredicted RBP30.88■■■□□ 2.53
RAB11FIP3-201ENST00000262305 RSF1Q96T23 1441 aaPredicted RBP30.86■■■□□ 2.53
RAB11FIP3-201ENST00000262305 SLC4A1APQ9BWU0 796 aaKnown RBP30.85■■■□□ 2.53
RAB11FIP3-201ENST00000262305 MYT1Q01538 1121 aa30.81■■■□□ 2.52
RAB11FIP3-201ENST00000262305 ARID3CA6NKF2 412 aa30.8■■■□□ 2.52
RAB11FIP3-201ENST00000262305 NACADO15069 1562 aa30.79■■■□□ 2.52
RAB11FIP3-201ENST00000262305 ZNF326Q5BKZ1 582 aaKnown RBP30.77■■■□□ 2.52
RAB11FIP3-201ENST00000262305 CDK11AQ9UQ88 783 aaPredicted RBP30.77■■■□□ 2.52
RAB11FIP3-201ENST00000262305 ANP32CO43423 234 aa30.76■■■□□ 2.51
RAB11FIP3-201ENST00000262305 DAXXQ9UER7 740 aaPredicted RBP30.74■■■□□ 2.51
RAB11FIP3-201ENST00000262305 ZNF777Q9ULD5 760 aaPredicted RBP30.6■■■□□ 2.49
RAB11FIP3-201ENST00000262305 EEA1Q15075 1411 aa30.5■■■□□ 2.47
RAB11FIP3-201ENST00000262305 GTF3C3Q9Y5Q9 886 aa30.49■■■□□ 2.47
RAB11FIP3-201ENST00000262305 CLIP1P30622 1438 aa30.45■■■□□ 2.46
RAB11FIP3-201ENST00000262305 MYO15BQ96JP2 1530 aa30.41■■■□□ 2.46
RAB11FIP3-201ENST00000262305 WRNQ14191 1432 aaPredicted RBP eCLIP30.37■■■□□ 2.45
RAB11FIP3-201ENST00000262305 BAZ1BQ9UIG0 1483 aaKnown RBP30.36■■■□□ 2.45
RAB11FIP3-201ENST00000262305 TONSLQ96HA7 1378 aa30.36■■■□□ 2.45
RAB11FIP3-201ENST00000262305 CLSPNQ9HAW4 1339 aa30.34■■■□□ 2.45
RAB11FIP3-201ENST00000262305 GOLGA3Q08378 1498 aa30.31■■■□□ 2.44
RAB11FIP3-201ENST00000262305 BAZ1AQ9NRL2 1556 aaPredicted RBP30.3■■■□□ 2.44
RAB11FIP3-201ENST00000262305 BCANQ96GW7 911 aa30.29■■■□□ 2.44
RAB11FIP3-201ENST00000262305 ACIN1Q9UKV3 1341 aaKnown RBP30.26■■■□□ 2.43
RAB11FIP3-201ENST00000262305 MTUS2Q5JR59 1369 aa30.25■■■□□ 2.43
RAB11FIP3-201ENST00000262305 CEP162Q5TB80 1403 aa30.25■■■□□ 2.43
RAB11FIP3-201ENST00000262305 CECR2Q9BXF3 1484 aa30.22■■■□□ 2.43
RAB11FIP3-201ENST00000262305 CHIC2Q9UKJ5 165 aa30.17■■■□□ 2.42
RAB11FIP3-201ENST00000262305 CHMP7Q8WUX9 453 aaPredicted RBP30.16■■■□□ 2.42
RAB11FIP3-201ENST00000262305 TNIKQ9UKE5 1360 aa30.13■■■□□ 2.41
RAB11FIP3-201ENST00000262305 KIF27Q86VH2 1401 aa30.12■■■□□ 2.41
RAB11FIP3-201ENST00000262305 NPM1P06748 294 aaKnown RBP eCLIP30.1■■■□□ 2.41
RAB11FIP3-201ENST00000262305 CEP164Q9UPV0 1460 aa30.07■■■□□ 2.4
RAB11FIP3-201ENST00000262305 TSPY4P0CV99 314 aa30.06■■■□□ 2.4
RAB11FIP3-201ENST00000262305 TSPY10P0CW01 314 aa30.06■■■□□ 2.4
RAB11FIP3-201ENST00000262305 RTL5Q5HYW3 569 aaPredicted RBP30.05■■■□□ 2.4
RAB11FIP3-201ENST00000262305 DDX10Q13206 875 aaKnown RBP30.04■■■□□ 2.4
RAB11FIP3-201ENST00000262305 NEFMP07197 916 aa29.95■■■□□ 2.39
RAB11FIP3-201ENST00000262305 CHGAP10645 457 aaKnown RBP29.91■■■□□ 2.38
RAB11FIP3-201ENST00000262305 CANXP27824 592 aaKnown RBP29.9■■■□□ 2.38
RAB11FIP3-201ENST00000262305 ESF1Q9H501 851 aaKnown RBP29.9■■■□□ 2.38
RAB11FIP3-201ENST00000262305 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.89■■■□□ 2.377e-8■■□□□ 12.5
RAB11FIP3-201ENST00000262305 MROH2BQ7Z745 1585 aa29.85■■■□□ 2.37
RAB11FIP3-201ENST00000262305 ZBTB47Q9UFB7 747 aaPredicted RBP29.84■■■□□ 2.37
RAB11FIP3-201ENST00000262305 HNRNPUQ00839 825 aaKnown RBP eCLIP29.83■■■□□ 2.37
RAB11FIP3-201ENST00000262305 RRP7BPQ9NSQ0 103 aa29.82■■■□□ 2.36
RAB11FIP3-201ENST00000262305 PLEKHD1A6NEE1 506 aa29.8■■■□□ 2.36
RAB11FIP3-201ENST00000262305 STAG3Q9UJ98 1225 aa29.78■■■□□ 2.36
RAB11FIP3-201ENST00000262305 FAM9BQ8IZU0 186 aa29.74■■■□□ 2.35
RAB11FIP3-201ENST00000262305 SOGA1O94964 1423 aa29.72■■■□□ 2.35
RAB11FIP3-201ENST00000262305 CCDC88BA6NC98 1476 aa29.71■■■□□ 2.35
RAB11FIP3-201ENST00000262305 KDM2AQ9Y2K7 1162 aa29.7■■■□□ 2.35
RAB11FIP3-201ENST00000262305 FKBP8Q14318 412 aa29.7■■■□□ 2.35
RAB11FIP3-201ENST00000262305 EIF4G2P78344 907 aaKnown RBP eCLIP29.67■■■□□ 2.34
RAB11FIP3-201ENST00000262305 MIER1Q8N108 512 aa29.66■■■□□ 2.34
RAB11FIP3-201ENST00000262305 TMC1Q8TDI8 760 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms