RNA–Protein interactions for RNA: ENST00000639724.1

MED17-221, Transcript of mediator complex subunit 17, humanhuman

TSL 5 BASIC

Gene MED17, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED17-221ENST00000639724 NISCHQ9Y2I1 1504 aa43.92■■■■■ 4.62
MED17-221ENST00000639724 CCDC180Q9P1Z9 1646 aa38.08■■■■□ 3.69
MED17-221ENST00000639724 ZCCHC6Q5VYS8 1495 aaKnown RBP36.93■■■■□ 3.5
MED17-221ENST00000639724 DCAF8L2P0C7V8 631 aa36.4■■■■□ 3.42
MED17-221ENST00000639724 DCAF1Q9Y4B6 1507 aa36.22■■■■□ 3.39
MED17-221ENST00000639724 SHROOM4Q9ULL8 1493 aa36.21■■■■□ 3.39
MED17-221ENST00000639724 ABCC9O60706 1549 aa35.96■■■■□ 3.35
MED17-221ENST00000639724 MYO15BQ96JP2 1530 aa35.67■■■■□ 3.3
MED17-221ENST00000639724 NACADO15069 1562 aa35.43■■■■□ 3.26
MED17-221ENST00000639724 SCRIBQ14160 1630 aa35.2■■■■□ 3.23
MED17-221ENST00000639724 RB1CC1Q8TDY2 1594 aa35.09■■■■□ 3.21
MED17-221ENST00000639724 HRCP23327 699 aa35.08■■■■□ 3.21
MED17-221ENST00000639724 SUPT5HO00267 1087 aaKnown RBP34.97■■■■□ 3.19
MED17-221ENST00000639724 UNC13AQ9UPW8 1703 aa34.46■■■■□ 3.11
MED17-221ENST00000639724 RSF1Q96T23 1441 aaPredicted RBP34.21■■■■□ 3.07
MED17-221ENST00000639724 CECR2Q9BXF3 1484 aa34.19■■■■□ 3.06
MED17-221ENST00000639724 PCGF6Q9BYE7 350 aa34.16■■■■□ 3.06
MED17-221ENST00000639724 PELP1Q8IZL8 1130 aaKnown RBP34.15■■■■□ 3.06
MED17-221ENST00000639724 BICRAQ9NZM4 1560 aa34.08■■■■□ 3.05
MED17-221ENST00000639724 PPARGC1BQ86YN6 1023 aaKnown RBP34.04■■■■□ 3.04
MED17-221ENST00000639724 PABPN1Q86U42 306 aaKnown RBP eCLIP34.03■■■■□ 3.04
MED17-221ENST00000639724 MROH2BQ7Z745 1585 aa34■■■■□ 3.03
MED17-221ENST00000639724 CHIC1Q5VXU3 224 aa33.94■■■■□ 3.02
MED17-221ENST00000639724 BAZ1AQ9NRL2 1556 aaPredicted RBP33.87■■■■□ 3.01
MED17-221ENST00000639724 WIZO95785 1651 aa33.74■■■□□ 2.99
MED17-221ENST00000639724 SMARCA4P51532 1647 aa33.7■■■□□ 2.99
MED17-221ENST00000639724 TOP2AP11388 1531 aaKnown RBP33.31■■■□□ 2.92
MED17-221ENST00000639724 TRIM26Q12899 539 aaPredicted RBP33.28■■■□□ 2.92
MED17-221ENST00000639724 PEG3Q9GZU2 1588 aa33.22■■■□□ 2.91
MED17-221ENST00000639724 ZEB1P37275 1124 aaPredicted RBP33.18■■■□□ 2.9
MED17-221ENST00000639724 ATAD2BQ9ULI0 1458 aa33.1■■■□□ 2.89
MED17-221ENST00000639724 SCAF1Q9H7N4 1312 aaKnown RBP33.08■■■□□ 2.89
MED17-221ENST00000639724 SMARCA2P51531 1590 aa33.05■■■□□ 2.88
MED17-221ENST00000639724 CCDC88BA6NC98 1476 aa33.05■■■□□ 2.88
MED17-221ENST00000639724 EIF4G1Q04637 1599 aaKnown RBP33.02■■■□□ 2.88
MED17-221ENST00000639724 LOC105371045A0A1W2PR82 267 aa32.97■■■□□ 2.87
MED17-221ENST00000639724 MYT1Q01538 1121 aa32.94■■■□□ 2.86
MED17-221ENST00000639724 BAZ1BQ9UIG0 1483 aaKnown RBP32.93■■■□□ 2.86
MED17-221ENST00000639724 TRIM41Q8WV44 630 aa32.79■■■□□ 2.84
MED17-221ENST00000639724 NCAPD3P42695 1498 aa32.74■■■□□ 2.83
MED17-221ENST00000639724 HMGXB3Q12766 1538 aa32.68■■■□□ 2.82
MED17-221ENST00000639724 CC2D2AQ9P2K1 1620 aa32.49■■■□□ 2.79
MED17-221ENST00000639724 ABCC8Q09428 1581 aa32.48■■■□□ 2.79
MED17-221ENST00000639724 ACIN1Q9UKV3 1341 aaKnown RBP32.38■■■□□ 2.77
MED17-221ENST00000639724 FAM9AQ8IZU1 332 aaPredicted RBP32.29■■■□□ 2.76
MED17-221ENST00000639724 WRNQ14191 1432 aaPredicted RBP eCLIP32.19■■■□□ 2.74
MED17-221ENST00000639724 NEUROD1Q13562 356 aa32.16■■■□□ 2.74
MED17-221ENST00000639724 CFTRP13569 1480 aa32.1■■■□□ 2.73
MED17-221ENST00000639724 CENPBP07199 599 aaPredicted RBP32.05■■■□□ 2.72
MED17-221ENST00000639724 SYNJ1O43426 1573 aa32.05■■■□□ 2.72
MED17-221ENST00000639724 GTF3C3Q9Y5Q9 886 aa32.01■■■□□ 2.72
MED17-221ENST00000639724 CADPSQ9ULU8 1353 aa31.95■■■□□ 2.71
MED17-221ENST00000639724 SOGA1O94964 1423 aa31.94■■■□□ 2.7
MED17-221ENST00000639724 EHMT2Q96KQ7 1210 aa31.91■■■□□ 2.7
MED17-221ENST00000639724 PRDM2Q13029 1718 aa31.9■■■□□ 2.7
MED17-221ENST00000639724 TOP2BQ02880 1626 aa31.86■■■□□ 2.69
MED17-221ENST00000639724 RUSC2Q8N2Y8 1516 aa31.82■■■□□ 2.68
MED17-221ENST00000639724 BIVM-ERCC5R4GMW8 1640 aa31.8■■■□□ 2.68
MED17-221ENST00000639724 EEA1Q15075 1411 aa31.79■■■□□ 2.68
MED17-221ENST00000639724 DIEXFQ68CQ4 756 aaKnown RBP31.77■■■□□ 2.68
MED17-221ENST00000639724 CUX1P39880 1505 aa31.75■■■□□ 2.67
MED17-221ENST00000639724 DNAJC5BQ9UF47 199 aa31.75■■■□□ 2.67
MED17-221ENST00000639724 CSRNP3Q8WYN3 585 aa31.71■■■□□ 2.67
MED17-221ENST00000639724 CCER1Q8TC90 406 aaPredicted RBP31.68■■■□□ 2.66
MED17-221ENST00000639724 NESP48681 1621 aa31.66■■■□□ 2.66
MED17-221ENST00000639724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.63■■■□□ 2.65
MED17-221ENST00000639724 FANCD2Q9BXW9 1451 aa31.61■■■□□ 2.65
MED17-221ENST00000639724 LAMC3Q9Y6N6 1575 aa31.56■■■□□ 2.64
MED17-221ENST00000639724 GOLGA3Q08378 1498 aa31.42■■■□□ 2.62
MED17-221ENST00000639724 CEP164Q9UPV0 1460 aa31.39■■■□□ 2.62
MED17-221ENST00000639724 KIF21BO75037 1637 aa31.39■■■□□ 2.62
MED17-221ENST00000639724 TNIKQ9UKE5 1360 aa31.38■■■□□ 2.61
MED17-221ENST00000639724 UBTFP17480 764 aaKnown RBP31.38■■■□□ 2.61
MED17-221ENST00000639724 FGD5Q6ZNL6 1462 aa31.37■■■□□ 2.61
MED17-221ENST00000639724 PDS5BQ9NTI5 1447 aa31.34■■■□□ 2.61
MED17-221ENST00000639724 KIF27Q86VH2 1401 aa31.33■■■□□ 2.61
MED17-221ENST00000639724 DNMBPQ6XZF7 1577 aa31.33■■■□□ 2.61
MED17-221ENST00000639724 TOPBP1Q92547 1522 aa31.3■■■□□ 2.6
MED17-221ENST00000639724 CEP162Q5TB80 1403 aa31.27■■■□□ 2.6
MED17-221ENST00000639724 RAPGEF2Q9Y4G8 1499 aa31.25■■■□□ 2.59
MED17-221ENST00000639724 CUX2O14529 1486 aa31.23■■■□□ 2.59
MED17-221ENST00000639724 KIF21AQ7Z4S6 1674 aa31.22■■■□□ 2.59
MED17-221ENST00000639724 ZNF316A6NFI3 1004 aaPredicted RBP31.22■■■□□ 2.59
MED17-221ENST00000639724 URB2Q14146 1524 aaKnown RBP31.21■■■□□ 2.59
MED17-221ENST00000639724 PRXQ9BXM0 1461 aa31.19■■■□□ 2.58
MED17-221ENST00000639724 POLA1P09884 1462 aaPredicted RBP31.17■■■□□ 2.58
MED17-221ENST00000639724 RAD54L2Q9Y4B4 1467 aa31.12■■■□□ 2.57
MED17-221ENST00000639724 ERICH3Q5RHP9 1530 aa31.12■■■□□ 2.57
MED17-221ENST00000639724 IGF1RP08069 1367 aa31.07■■■□□ 2.56
MED17-221ENST00000639724 ABCA10Q8WWZ4 1543 aa31.05■■■□□ 2.56
MED17-221ENST00000639724 YTHDC1Q96MU7 727 aaKnown RBP31.04■■■□□ 2.56
MED17-221ENST00000639724 CLIP1P30622 1438 aa30.97■■■□□ 2.55
MED17-221ENST00000639724 TTBK1Q5TCY1 1321 aaPredicted RBP30.93■■■□□ 2.54
MED17-221ENST00000639724 MRC2Q9UBG0 1479 aa30.92■■■□□ 2.54
MED17-221ENST00000639724 CARMIL1Q5VZK9 1371 aa30.92■■■□□ 2.54
MED17-221ENST00000639724 WDR97A6NE52 1622 aa30.91■■■□□ 2.54
MED17-221ENST00000639724 RANGAP1P46060 587 aaPredicted RBP30.9■■■□□ 2.54
MED17-221ENST00000639724 MIER1Q8N108 512 aa30.89■■■□□ 2.53
MED17-221ENST00000639724 CLSPNQ9HAW4 1339 aa30.83■■■□□ 2.53
MED17-221ENST00000639724 TDRD9Q8NDG6 1382 aaKnown RBP30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms