RNA–Protein interactions for RNA: ENST00000370056.8

VAV3-202, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAV3, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-202ENST00000370056 NISCHQ9Y2I1 1504 aa37.69■■■■□ 3.62
VAV3-202ENST00000370056 DCAF8L2P0C7V8 631 aa37.41■■■■□ 3.58
VAV3-202ENST00000370056 SUPT5HO00267 1087 aaKnown RBP36.08■■■■□ 3.37
VAV3-202ENST00000370056 SHROOM4Q9ULL8 1493 aa35.62■■■■□ 3.29
VAV3-202ENST00000370056 EHMT2Q96KQ7 1210 aa34.35■■■■□ 3.09
VAV3-202ENST00000370056 FAM9AQ8IZU1 332 aaPredicted RBP33.86■■■■□ 3.01
VAV3-202ENST00000370056 PCGF6Q9BYE7 350 aa33.8■■■■□ 3
VAV3-202ENST00000370056 APLP2Q06481 763 aa33.78■■■■□ 3
VAV3-202ENST00000370056 TRIM41Q8WV44 630 aa33.53■■■□□ 2.96
VAV3-202ENST00000370056 PELP1Q8IZL8 1130 aaKnown RBP33.32■■■□□ 2.93
VAV3-202ENST00000370056 ZEB1P37275 1124 aaPredicted RBP33.26■■■□□ 2.92
VAV3-202ENST00000370056 TTBK1Q5TCY1 1321 aaPredicted RBP33.25■■■□□ 2.91
VAV3-202ENST00000370056 CCER1Q8TC90 406 aaPredicted RBP32.96■■■□□ 2.87
VAV3-202ENST00000370056 UBTFP17480 764 aaKnown RBP32.87■■■□□ 2.85
VAV3-202ENST00000370056 RANGAP1P46060 587 aaPredicted RBP32.86■■■□□ 2.85
VAV3-202ENST00000370056 CENPBP07199 599 aaPredicted RBP32.77■■■□□ 2.84
VAV3-202ENST00000370056 CHIC1Q5VXU3 224 aa32.7■■■□□ 2.83
VAV3-202ENST00000370056 TRIM26Q12899 539 aaPredicted RBP32.63■■■□□ 2.81
VAV3-202ENST00000370056 HRCP23327 699 aa32.45■■■□□ 2.79
VAV3-202ENST00000370056 ATP1B4Q9UN42 357 aaPredicted RBP32.45■■■□□ 2.78
VAV3-202ENST00000370056 LOC105371045A0A1W2PR82 267 aa32.39■■■□□ 2.78
VAV3-202ENST00000370056 PPARGC1BQ86YN6 1023 aaKnown RBP32.38■■■□□ 2.77
VAV3-202ENST00000370056 YTHDC1Q96MU7 727 aaKnown RBP31.97■■■□□ 2.71
VAV3-202ENST00000370056 NEFLP07196 543 aa31.8■■■□□ 2.68
VAV3-202ENST00000370056 ERICH6Q7L0X2 663 aa31.76■■■□□ 2.67
VAV3-202ENST00000370056 ABCC9O60706 1549 aa31.72■■■□□ 2.67
VAV3-202ENST00000370056 HNRNPUL2Q1KMD3 747 aaKnown RBP31.69■■■□□ 2.66
VAV3-202ENST00000370056 ITGAEP38570 1179 aa31.65■■■□□ 2.66
VAV3-202ENST00000370056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.5■■■□□ 2.63
VAV3-202ENST00000370056 PABPN1Q86U42 306 aaKnown RBP eCLIP31.4■■■□□ 2.62
VAV3-202ENST00000370056 ZCCHC6Q5VYS8 1495 aaKnown RBP31.34■■■□□ 2.61
VAV3-202ENST00000370056 MYT1Q01538 1121 aa31.32■■■□□ 2.6
VAV3-202ENST00000370056 DIEXFQ68CQ4 756 aaKnown RBP31.27■■■□□ 2.6
VAV3-202ENST00000370056 POLR3GLQ9BT43 218 aa31.02■■■□□ 2.56
VAV3-202ENST00000370056 FAM50AQ14320 339 aaKnown RBP30.99■■■□□ 2.55
VAV3-202ENST00000370056 CSRNP3Q8WYN3 585 aa30.94■■■□□ 2.54
VAV3-202ENST00000370056 CCDC180Q9P1Z9 1646 aa30.93■■■□□ 2.54
VAV3-202ENST00000370056 MYT1LQ9UL68 1186 aa30.86■■■□□ 2.53
VAV3-202ENST00000370056 SCRIBQ14160 1630 aa30.85■■■□□ 2.53
VAV3-202ENST00000370056 DCAF1Q9Y4B6 1507 aa30.79■■■□□ 2.52
VAV3-202ENST00000370056 ZNF316A6NFI3 1004 aaPredicted RBP30.7■■■□□ 2.51
VAV3-202ENST00000370056 NEUROD1Q13562 356 aa30.69■■■□□ 2.5
VAV3-202ENST00000370056 CNGB1Q14028 1251 aaPredicted RBP30.69■■■□□ 2.5
VAV3-202ENST00000370056 TRIM52Q96A61 297 aa30.68■■■□□ 2.5
VAV3-202ENST00000370056 GTF3C3Q9Y5Q9 886 aa30.56■■■□□ 2.48
VAV3-202ENST00000370056 DAXXQ9UER7 740 aaPredicted RBP30.53■■■□□ 2.48
VAV3-202ENST00000370056 ANP32CO43423 234 aa30.45■■■□□ 2.46
VAV3-202ENST00000370056 P3H3Q8IVL6 736 aa30.37■■■□□ 2.45
VAV3-202ENST00000370056 ACIN1Q9UKV3 1341 aaKnown RBP30.34■■■□□ 2.45
VAV3-202ENST00000370056 RSF1Q96T23 1441 aaPredicted RBP30.24■■■□□ 2.43
VAV3-202ENST00000370056 MYO15BQ96JP2 1530 aa30.22■■■□□ 2.43
VAV3-202ENST00000370056 SLC4A1APQ9BWU0 796 aaKnown RBP30.22■■■□□ 2.43
VAV3-202ENST00000370056 ZNF326Q5BKZ1 582 aaKnown RBP30.21■■■□□ 2.43
VAV3-202ENST00000370056 FBLN2P98095 1184 aa30.2■■■□□ 2.42
VAV3-202ENST00000370056 BCANQ96GW7 911 aa30.18■■■□□ 2.42
VAV3-202ENST00000370056 ARID3CA6NKF2 412 aa30.04■■■□□ 2.4
VAV3-202ENST00000370056 RB1CC1Q8TDY2 1594 aa30.03■■■□□ 2.4
VAV3-202ENST00000370056 RTL5Q5HYW3 569 aaPredicted RBP30.02■■■□□ 2.4
VAV3-202ENST00000370056 CDK11AQ9UQ88 783 aaPredicted RBP30.02■■■□□ 2.4
VAV3-202ENST00000370056 CLSPNQ9HAW4 1339 aa30.01■■■□□ 2.39
VAV3-202ENST00000370056 EEA1Q15075 1411 aa29.98■■■□□ 2.39
VAV3-202ENST00000370056 CLIP1P30622 1438 aa29.94■■■□□ 2.38
VAV3-202ENST00000370056 NACADO15069 1562 aa29.94■■■□□ 2.38
VAV3-202ENST00000370056 TONSLQ96HA7 1378 aa29.92■■■□□ 2.38
VAV3-202ENST00000370056 ZNF777Q9ULD5 760 aaPredicted RBP29.87■■■□□ 2.37
VAV3-202ENST00000370056 CEP162Q5TB80 1403 aa29.82■■■□□ 2.36
VAV3-202ENST00000370056 GOLGA3Q08378 1498 aa29.82■■■□□ 2.36
VAV3-202ENST00000370056 WRNQ14191 1432 aaPredicted RBP eCLIP29.73■■■□□ 2.35
VAV3-202ENST00000370056 DDX10Q13206 875 aaKnown RBP29.73■■■□□ 2.35
VAV3-202ENST00000370056 TNIKQ9UKE5 1360 aa29.67■■■□□ 2.34
VAV3-202ENST00000370056 MTUS2Q5JR59 1369 aa29.62■■■□□ 2.33
VAV3-202ENST00000370056 FKBP8Q14318 412 aa29.6■■■□□ 2.33
VAV3-202ENST00000370056 BAZ1AQ9NRL2 1556 aaPredicted RBP29.59■■■□□ 2.33
VAV3-202ENST00000370056 CHIC2Q9UKJ5 165 aa29.57■■■□□ 2.33
VAV3-202ENST00000370056 BAZ1BQ9UIG0 1483 aaKnown RBP29.56■■■□□ 2.32
VAV3-202ENST00000370056 HNRNPUQ00839 825 aaKnown RBP eCLIP29.56■■■□□ 2.32
VAV3-202ENST00000370056 CEP164Q9UPV0 1460 aa29.55■■■□□ 2.32
VAV3-202ENST00000370056 MIER1Q8N108 512 aa29.54■■■□□ 2.32
VAV3-202ENST00000370056 CECR2Q9BXF3 1484 aa29.51■■■□□ 2.31
VAV3-202ENST00000370056 CANXP27824 592 aaKnown RBP29.5■■■□□ 2.31
VAV3-202ENST00000370056 KIF27Q86VH2 1401 aa29.45■■■□□ 2.3
VAV3-202ENST00000370056 SCAF1Q9H7N4 1312 aaKnown RBP29.44■■■□□ 2.3
VAV3-202ENST00000370056 FAM9BQ8IZU0 186 aa29.42■■■□□ 2.3
VAV3-202ENST00000370056 ANP32AP39687 249 aaKnown RBP29.42■■■□□ 2.3
VAV3-202ENST00000370056 ZBTB47Q9UFB7 747 aaPredicted RBP29.4■■■□□ 2.3
VAV3-202ENST00000370056 NEFMP07197 916 aa29.38■■■□□ 2.29
VAV3-202ENST00000370056 TSPY4P0CV99 314 aa29.35■■■□□ 2.29
VAV3-202ENST00000370056 TSPY10P0CW01 314 aa29.35■■■□□ 2.29
VAV3-202ENST00000370056 TMC1Q8TDI8 760 aa29.26■■■□□ 2.28
VAV3-202ENST00000370056 CHMP7Q8WUX9 453 aaPredicted RBP29.26■■■□□ 2.27
VAV3-202ENST00000370056 MRS2Q9HD23 443 aa29.25■■■□□ 2.27
VAV3-202ENST00000370056 EIF4G2P78344 907 aaKnown RBP eCLIP29.25■■■□□ 2.27
VAV3-202ENST00000370056 RRP7BPQ9NSQ0 103 aa29.25■■■□□ 2.27
VAV3-202ENST00000370056 HIRIP3Q9BW71 556 aaPredicted RBP29.23■■■□□ 2.27
VAV3-202ENST00000370056 SOGA1O94964 1423 aa29.2■■■□□ 2.26
VAV3-202ENST00000370056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.2■■■□□ 2.26
VAV3-202ENST00000370056 MROH2BQ7Z745 1585 aa29.19■■■□□ 2.26
VAV3-202ENST00000370056 CHGAP10645 457 aaKnown RBP29.18■■■□□ 2.26
VAV3-202ENST00000370056 NPM2Q86SE8 214 aaKnown RBP29.15■■■□□ 2.26
VAV3-202ENST00000370056 KDM2AQ9Y2K7 1162 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms