RNA–Protein interactions for RNA: ENST00000592524.5

GJC1-209, Transcript of gap junction protein gamma 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GJC1, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJC1-209ENST00000592524 NISCHQ9Y2I1 1504 aa50.97■■■■■ 5.75
GJC1-209ENST00000592524 CCDC180Q9P1Z9 1646 aa43.93■■■■■ 4.62
GJC1-209ENST00000592524 ZCCHC6Q5VYS8 1495 aaKnown RBP42.94■■■■■ 4.46
GJC1-209ENST00000592524 SHROOM4Q9ULL8 1493 aa42.19■■■■■ 4.34
GJC1-209ENST00000592524 DCAF1Q9Y4B6 1507 aa42.1■■■■■ 4.33
GJC1-209ENST00000592524 DCAF8L2P0C7V8 631 aa41.97■■■■■ 4.31
GJC1-209ENST00000592524 MYO15BQ96JP2 1530 aa41.32■■■■■ 4.21
GJC1-209ENST00000592524 ABCC9O60706 1549 aa41.07■■■■■ 4.17
GJC1-209ENST00000592524 SUPT5HO00267 1087 aaKnown RBP40.99■■■■■ 4.15
GJC1-209ENST00000592524 NACADO15069 1562 aa40.83■■■■■ 4.13
GJC1-209ENST00000592524 SCRIBQ14160 1630 aa40.61■■■■■ 4.09
GJC1-209ENST00000592524 RB1CC1Q8TDY2 1594 aa40.28■■■■■ 4.04
GJC1-209ENST00000592524 RSF1Q96T23 1441 aaPredicted RBP39.89■■■■□ 3.98
GJC1-209ENST00000592524 CHIC1Q5VXU3 224 aa39.66■■■■□ 3.94
GJC1-209ENST00000592524 CECR2Q9BXF3 1484 aa39.62■■■■□ 3.93
GJC1-209ENST00000592524 UNC13AQ9UPW8 1703 aa39.47■■■■□ 3.91
GJC1-209ENST00000592524 MROH2BQ7Z745 1585 aa39.44■■■■□ 3.9
GJC1-209ENST00000592524 BAZ1AQ9NRL2 1556 aaPredicted RBP39.23■■■■□ 3.87
GJC1-209ENST00000592524 BICRAQ9NZM4 1560 aa39.15■■■■□ 3.86
GJC1-209ENST00000592524 WIZO95785 1651 aa39.1■■■■□ 3.85
GJC1-209ENST00000592524 PABPN1Q86U42 306 aaKnown RBP eCLIP38.99■■■■□ 3.83
GJC1-209ENST00000592524 SMARCA4P51532 1647 aa38.97■■■■□ 3.83
GJC1-209ENST00000592524 TOP2AP11388 1531 aaKnown RBP38.69■■■■□ 3.78
GJC1-209ENST00000592524 PEG3Q9GZU2 1588 aa38.47■■■■□ 3.75
GJC1-209ENST00000592524 TRIM41Q8WV44 630 aa38.45■■■■□ 3.75
GJC1-209ENST00000592524 CCDC88BA6NC98 1476 aa38.41■■■■□ 3.74
GJC1-209ENST00000592524 SMARCA2P51531 1590 aa38.38■■■■□ 3.73
GJC1-209ENST00000592524 EIF4G1Q04637 1599 aaKnown RBP38.34■■■■□ 3.73
GJC1-209ENST00000592524 ATAD2BQ9ULI0 1458 aa38.23■■■■□ 3.71
GJC1-209ENST00000592524 LOC105371045A0A1W2PR82 267 aa38.22■■■■□ 3.71
GJC1-209ENST00000592524 BAZ1BQ9UIG0 1483 aaKnown RBP38■■■■□ 3.67
GJC1-209ENST00000592524 FAM9AQ8IZU1 332 aaPredicted RBP37.81■■■■□ 3.64
GJC1-209ENST00000592524 ABCC8Q09428 1581 aa37.79■■■■□ 3.64
GJC1-209ENST00000592524 NCAPD3P42695 1498 aa37.77■■■■□ 3.64
GJC1-209ENST00000592524 HMGXB3Q12766 1538 aa37.69■■■■□ 3.62
GJC1-209ENST00000592524 WRNQ14191 1432 aaPredicted RBP eCLIP37.47■■■■□ 3.59
GJC1-209ENST00000592524 SOGA1O94964 1423 aa37.32■■■■□ 3.56
GJC1-209ENST00000592524 EEA1Q15075 1411 aa37.29■■■■□ 3.56
GJC1-209ENST00000592524 SYNJ1O43426 1573 aa37.26■■■■□ 3.56
GJC1-209ENST00000592524 EHMT2Q96KQ7 1210 aa37.26■■■■□ 3.55
GJC1-209ENST00000592524 PCGF6Q9BYE7 350 aa37.18■■■■□ 3.54
GJC1-209ENST00000592524 RUSC2Q8N2Y8 1516 aa37.14■■■■□ 3.54
GJC1-209ENST00000592524 CSRNP3Q8WYN3 585 aa37.14■■■■□ 3.54
GJC1-209ENST00000592524 CFTRP13569 1480 aa37.13■■■■□ 3.54
GJC1-209ENST00000592524 CC2D2AQ9P2K1 1620 aa37.12■■■■□ 3.53
GJC1-209ENST00000592524 TOP2BQ02880 1626 aa37.03■■■■□ 3.52
GJC1-209ENST00000592524 TRIM26Q12899 539 aaPredicted RBP36.98■■■■□ 3.51
GJC1-209ENST00000592524 BIVM-ERCC5R4GMW8 1640 aa36.94■■■■□ 3.5
GJC1-209ENST00000592524 TNIKQ9UKE5 1360 aa36.92■■■■□ 3.5
GJC1-209ENST00000592524 CADPSQ9ULU8 1353 aa36.87■■■■□ 3.49
GJC1-209ENST00000592524 GOLGA3Q08378 1498 aa36.81■■■■□ 3.48
GJC1-209ENST00000592524 CUX1P39880 1505 aa36.81■■■■□ 3.48
GJC1-209ENST00000592524 PRDM2Q13029 1718 aa36.76■■■■□ 3.48
GJC1-209ENST00000592524 CEP164Q9UPV0 1460 aa36.74■■■■□ 3.47
GJC1-209ENST00000592524 CEP162Q5TB80 1403 aa36.74■■■■□ 3.47
GJC1-209ENST00000592524 KIF21BO75037 1637 aa36.73■■■■□ 3.47
GJC1-209ENST00000592524 HRCP23327 699 aa36.72■■■■□ 3.47
GJC1-209ENST00000592524 UBTFP17480 764 aaKnown RBP36.7■■■■□ 3.47
GJC1-209ENST00000592524 RAPGEF2Q9Y4G8 1499 aa36.49■■■■□ 3.43
GJC1-209ENST00000592524 KIF27Q86VH2 1401 aa36.45■■■■□ 3.43
GJC1-209ENST00000592524 PRXQ9BXM0 1461 aa36.43■■■■□ 3.42
GJC1-209ENST00000592524 FANCD2Q9BXW9 1451 aa36.43■■■■□ 3.42
GJC1-209ENST00000592524 ERICH3Q5RHP9 1530 aa36.36■■■■□ 3.41
GJC1-209ENST00000592524 PPARGC1BQ86YN6 1023 aaKnown RBP36.33■■■■□ 3.41
GJC1-209ENST00000592524 NESP48681 1621 aa36.32■■■■□ 3.4
GJC1-209ENST00000592524 CLIP1P30622 1438 aa36.29■■■■□ 3.4
GJC1-209ENST00000592524 FGD5Q6ZNL6 1462 aa36.28■■■■□ 3.4
GJC1-209ENST00000592524 LAMC3Q9Y6N6 1575 aa36.26■■■■□ 3.4
GJC1-209ENST00000592524 DNAJC5BQ9UF47 199 aa36.2■■■■□ 3.39
GJC1-209ENST00000592524 CUX2O14529 1486 aa36.2■■■■□ 3.39
GJC1-209ENST00000592524 DNMBPQ6XZF7 1577 aa36.18■■■■□ 3.38
GJC1-209ENST00000592524 IGF1RP08069 1367 aa36.15■■■■□ 3.38
GJC1-209ENST00000592524 TOPBP1Q92547 1522 aa36.12■■■■□ 3.37
GJC1-209ENST00000592524 VPS8Q8N3P4 1428 aa36.07■■■■□ 3.36
GJC1-209ENST00000592524 PDS5BQ9NTI5 1447 aa36.02■■■■□ 3.36
GJC1-209ENST00000592524 POLA1P09884 1462 aaPredicted RBP36■■■■□ 3.35
GJC1-209ENST00000592524 ABCA10Q8WWZ4 1543 aa35.97■■■■□ 3.35
GJC1-209ENST00000592524 URB2Q14146 1524 aaKnown RBP35.96■■■■□ 3.35
GJC1-209ENST00000592524 RAD54L2Q9Y4B4 1467 aa35.94■■■■□ 3.34
GJC1-209ENST00000592524 CARMIL1Q5VZK9 1371 aa35.94■■■■□ 3.34
GJC1-209ENST00000592524 RANGAP1P46060 587 aaPredicted RBP35.9■■■■□ 3.34
GJC1-209ENST00000592524 ARAP1Q96P48 1450 aa35.85■■■■□ 3.33
GJC1-209ENST00000592524 ZEB1P37275 1124 aaPredicted RBP35.84■■■■□ 3.33
GJC1-209ENST00000592524 TTBK1Q5TCY1 1321 aaPredicted RBP35.83■■■■□ 3.33
GJC1-209ENST00000592524 KIF21AQ7Z4S6 1674 aa35.74■■■■□ 3.31
GJC1-209ENST00000592524 APLP2Q06481 763 aa35.73■■■■□ 3.31
GJC1-209ENST00000592524 ARHGAP35Q9NRY4 1499 aa35.71■■■■□ 3.31
GJC1-209ENST00000592524 WDR97A6NE52 1622 aa35.69■■■■□ 3.3
GJC1-209ENST00000592524 CUL7Q14999 1698 aa35.6■■■■□ 3.29
GJC1-209ENST00000592524 ABCA5Q8WWZ7 1642 aa35.56■■■■□ 3.28
GJC1-209ENST00000592524 TDRD9Q8NDG6 1382 aaKnown RBP35.55■■■■□ 3.28
GJC1-209ENST00000592524 GAPVD1Q14C86 1478 aa35.52■■■■□ 3.28
GJC1-209ENST00000592524 MRC2Q9UBG0 1479 aa35.5■■■■□ 3.27
GJC1-209ENST00000592524 TARBP1Q13395 1621 aaKnown RBP35.49■■■■□ 3.27
GJC1-209ENST00000592524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.46■■■■□ 3.27
GJC1-209ENST00000592524 KANK4Q5T7N3 995 aaPredicted RBP35.4■■■■□ 3.26
GJC1-209ENST00000592524 CCER1Q8TC90 406 aaPredicted RBP35.37■■■■□ 3.25
GJC1-209ENST00000592524 MAP3K1Q13233 1512 aa35.3■■■■□ 3.24
GJC1-209ENST00000592524 EFCAB5A4FU69 1503 aa35.27■■■■□ 3.24
GJC1-209ENST00000592524 CTTNBP2Q8WZ74 1663 aa35.27■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms