RNA–Protein interactions for RNA: ENST00000373615.8

LHX2-201, Transcript of LIM homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX2, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2-201ENST00000373615 NISCHQ9Y2I1 1504 aa46.96■■■■■ 5.11
LHX2-201ENST00000373615 CCDC180Q9P1Z9 1646 aa40.01■■■■■ 4
LHX2-201ENST00000373615 SHROOM4Q9ULL8 1493 aa39.85■■■■□ 3.97
LHX2-201ENST00000373615 ZCCHC6Q5VYS8 1495 aaKnown RBP39.65■■■■□ 3.94
LHX2-201ENST00000373615 DCAF8L2P0C7V8 631 aa39.11■■■■□ 3.85
LHX2-201ENST00000373615 SUPT5HO00267 1087 aaKnown RBP39.02■■■■□ 3.84
LHX2-201ENST00000373615 DCAF1Q9Y4B6 1507 aa38.54■■■■□ 3.76
LHX2-201ENST00000373615 CHIC1Q5VXU3 224 aa37.8■■■■□ 3.64
LHX2-201ENST00000373615 MYO15BQ96JP2 1530 aa37.53■■■■□ 3.6
LHX2-201ENST00000373615 SCRIBQ14160 1630 aa37.46■■■■□ 3.59
LHX2-201ENST00000373615 ABCC9O60706 1549 aa37.33■■■■□ 3.57
LHX2-201ENST00000373615 NACADO15069 1562 aa37.1■■■■□ 3.53
LHX2-201ENST00000373615 RSF1Q96T23 1441 aaPredicted RBP37.08■■■■□ 3.53
LHX2-201ENST00000373615 LOC105371045A0A1W2PR82 267 aa36.68■■■■□ 3.46
LHX2-201ENST00000373615 CECR2Q9BXF3 1484 aa36.64■■■■□ 3.46
LHX2-201ENST00000373615 RB1CC1Q8TDY2 1594 aa36.6■■■■□ 3.45
LHX2-201ENST00000373615 MROH2BQ7Z745 1585 aa36.48■■■■□ 3.43
LHX2-201ENST00000373615 TRIM41Q8WV44 630 aa36.39■■■■□ 3.42
LHX2-201ENST00000373615 PCGF6Q9BYE7 350 aa36.38■■■■□ 3.41
LHX2-201ENST00000373615 WIZO95785 1651 aa36.26■■■■□ 3.39
LHX2-201ENST00000373615 HRCP23327 699 aa36.18■■■■□ 3.38
LHX2-201ENST00000373615 BAZ1AQ9NRL2 1556 aaPredicted RBP36.09■■■■□ 3.37
LHX2-201ENST00000373615 FAM9AQ8IZU1 332 aaPredicted RBP36.05■■■■□ 3.36
LHX2-201ENST00000373615 UNC13AQ9UPW8 1703 aa35.93■■■■□ 3.34
LHX2-201ENST00000373615 SMARCA4P51532 1647 aa35.8■■■■□ 3.32
LHX2-201ENST00000373615 TRIM26Q12899 539 aaPredicted RBP35.77■■■■□ 3.32
LHX2-201ENST00000373615 EHMT2Q96KQ7 1210 aa35.73■■■■□ 3.31
LHX2-201ENST00000373615 TOP2AP11388 1531 aaKnown RBP35.69■■■■□ 3.3
LHX2-201ENST00000373615 PABPN1Q86U42 306 aaKnown RBP eCLIP35.67■■■■□ 3.3
LHX2-201ENST00000373615 EIF4G1Q04637 1599 aaKnown RBP35.6■■■■□ 3.29
LHX2-201ENST00000373615 CCDC88BA6NC98 1476 aa35.57■■■■□ 3.28
LHX2-201ENST00000373615 BICRAQ9NZM4 1560 aa35.52■■■■□ 3.28
LHX2-201ENST00000373615 SMARCA2P51531 1590 aa35.49■■■■□ 3.27
LHX2-201ENST00000373615 PPARGC1BQ86YN6 1023 aaKnown RBP35.44■■■■□ 3.26
LHX2-201ENST00000373615 ABCC8Q09428 1581 aa35.36■■■■□ 3.25
LHX2-201ENST00000373615 PEG3Q9GZU2 1588 aa35.13■■■■□ 3.21
LHX2-201ENST00000373615 SOGA1O94964 1423 aa35.01■■■■□ 3.2
LHX2-201ENST00000373615 ATAD2BQ9ULI0 1458 aa34.97■■■■□ 3.19
LHX2-201ENST00000373615 ZEB1P37275 1124 aaPredicted RBP34.87■■■■□ 3.17
LHX2-201ENST00000373615 BAZ1BQ9UIG0 1483 aaKnown RBP34.87■■■■□ 3.17
LHX2-201ENST00000373615 CSRNP3Q8WYN3 585 aa34.86■■■■□ 3.17
LHX2-201ENST00000373615 WRNQ14191 1432 aaPredicted RBP eCLIP34.85■■■■□ 3.17
LHX2-201ENST00000373615 RUSC2Q8N2Y8 1516 aa34.83■■■■□ 3.17
LHX2-201ENST00000373615 EEA1Q15075 1411 aa34.82■■■■□ 3.16
LHX2-201ENST00000373615 CEP162Q5TB80 1403 aa34.73■■■■□ 3.15
LHX2-201ENST00000373615 TNIKQ9UKE5 1360 aa34.72■■■■□ 3.15
LHX2-201ENST00000373615 UBTFP17480 764 aaKnown RBP34.71■■■■□ 3.15
LHX2-201ENST00000373615 SYNJ1O43426 1573 aa34.63■■■■□ 3.13
LHX2-201ENST00000373615 GOLGA3Q08378 1498 aa34.54■■■■□ 3.12
LHX2-201ENST00000373615 TTBK1Q5TCY1 1321 aaPredicted RBP34.51■■■■□ 3.12
LHX2-201ENST00000373615 CEP164Q9UPV0 1460 aa34.39■■■■□ 3.1
LHX2-201ENST00000373615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.38■■■■□ 3.09
LHX2-201ENST00000373615 NCAPD3P42695 1498 aa34.35■■■■□ 3.09
LHX2-201ENST00000373615 KIF21BO75037 1637 aa34.3■■■■□ 3.08
LHX2-201ENST00000373615 CCER1Q8TC90 406 aaPredicted RBP34.29■■■■□ 3.08
LHX2-201ENST00000373615 HMGXB3Q12766 1538 aa34.29■■■■□ 3.08
LHX2-201ENST00000373615 TOP2BQ02880 1626 aa34.25■■■■□ 3.07
LHX2-201ENST00000373615 RAPGEF2Q9Y4G8 1499 aa34.17■■■■□ 3.06
LHX2-201ENST00000373615 CLIP1P30622 1438 aa34.17■■■■□ 3.06
LHX2-201ENST00000373615 BIVM-ERCC5R4GMW8 1640 aa34.1■■■■□ 3.05
LHX2-201ENST00000373615 RANGAP1P46060 587 aaPredicted RBP34.06■■■■□ 3.04
LHX2-201ENST00000373615 CFTRP13569 1480 aa34■■■■□ 3.03
LHX2-201ENST00000373615 CUX1P39880 1505 aa33.97■■■■□ 3.03
LHX2-201ENST00000373615 VPS8Q8N3P4 1428 aa33.97■■■■□ 3.03
LHX2-201ENST00000373615 APLP2Q06481 763 aa33.9■■■■□ 3.02
LHX2-201ENST00000373615 PRXQ9BXM0 1461 aa33.87■■■■□ 3.01
LHX2-201ENST00000373615 ERICH3Q5RHP9 1530 aa33.82■■■■□ 3
LHX2-201ENST00000373615 KIF27Q86VH2 1401 aa33.82■■■■□ 3
LHX2-201ENST00000373615 HNRNPUL2Q1KMD3 747 aaKnown RBP33.75■■■□□ 2.99
LHX2-201ENST00000373615 CADPSQ9ULU8 1353 aa33.7■■■□□ 2.98
LHX2-201ENST00000373615 PRDM2Q13029 1718 aa33.63■■■□□ 2.97
LHX2-201ENST00000373615 ARAP1Q96P48 1450 aa33.59■■■□□ 2.97
LHX2-201ENST00000373615 CC2D2AQ9P2K1 1620 aa33.58■■■□□ 2.97
LHX2-201ENST00000373615 CUX2O14529 1486 aa33.52■■■□□ 2.96
LHX2-201ENST00000373615 IGF1RP08069 1367 aa33.47■■■□□ 2.95
LHX2-201ENST00000373615 DIEXFQ68CQ4 756 aaKnown RBP33.45■■■□□ 2.95
LHX2-201ENST00000373615 KANK4Q5T7N3 995 aaPredicted RBP33.45■■■□□ 2.94
LHX2-201ENST00000373615 FGD5Q6ZNL6 1462 aa33.42■■■□□ 2.94
LHX2-201ENST00000373615 ARHGAP35Q9NRY4 1499 aa33.38■■■□□ 2.93
LHX2-201ENST00000373615 FANCD2Q9BXW9 1451 aa33.34■■■□□ 2.93
LHX2-201ENST00000373615 CARMIL1Q5VZK9 1371 aa33.33■■■□□ 2.93
LHX2-201ENST00000373615 ZNF316A6NFI3 1004 aaPredicted RBP33.28■■■□□ 2.92
LHX2-201ENST00000373615 NESP48681 1621 aa33.17■■■□□ 2.9
LHX2-201ENST00000373615 RRBP1Q9P2E9 1410 aaKnown RBP33.13■■■□□ 2.89
LHX2-201ENST00000373615 RAD54L2Q9Y4B4 1467 aa33.12■■■□□ 2.89
LHX2-201ENST00000373615 SCAF1Q9H7N4 1312 aaKnown RBP33.11■■■□□ 2.89
LHX2-201ENST00000373615 DNMBPQ6XZF7 1577 aa33.11■■■□□ 2.89
LHX2-201ENST00000373615 PELP1Q8IZL8 1130 aaKnown RBP33.11■■■□□ 2.89
LHX2-201ENST00000373615 TOPBP1Q92547 1522 aa33.08■■■□□ 2.89
LHX2-201ENST00000373615 POLA1P09884 1462 aaPredicted RBP33.07■■■□□ 2.88
LHX2-201ENST00000373615 CCNB3Q8WWL7 1395 aa33.05■■■□□ 2.88
LHX2-201ENST00000373615 ABCA10Q8WWZ4 1543 aa33.03■■■□□ 2.88
LHX2-201ENST00000373615 DHX57Q6P158 1386 aaKnown RBP33.02■■■□□ 2.88
LHX2-201ENST00000373615 P3H3Q8IVL6 736 aa33■■■□□ 2.87
LHX2-201ENST00000373615 CLSPNQ9HAW4 1339 aa32.99■■■□□ 2.87
LHX2-201ENST00000373615 ITGAEP38570 1179 aa32.98■■■□□ 2.87
LHX2-201ENST00000373615 ACIN1Q9UKV3 1341 aaKnown RBP32.95■■■□□ 2.87
LHX2-201ENST00000373615 TIAM1Q13009 1591 aa32.95■■■□□ 2.87
LHX2-201ENST00000373615 NEUROD1Q13562 356 aa32.93■■■□□ 2.86
LHX2-201ENST00000373615 MAP3K1Q13233 1512 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms