RNA–Protein interactions for RNA: ENST00000562710.1

LINC00565-201, long intergenic non-protein coding RNA 565, humanhuman

BASIC

Gene LINC00565, Length 2,331 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00565-201ENST00000562710 NISCHQ9Y2I1 1504 aa44.72■■■■■ 4.75
LINC00565-201ENST00000562710 SHROOM4Q9ULL8 1493 aa38.15■■■■□ 3.7
LINC00565-201ENST00000562710 CCDC180Q9P1Z9 1646 aa37.98■■■■□ 3.67
LINC00565-201ENST00000562710 ZCCHC6Q5VYS8 1495 aaKnown RBP37.88■■■■□ 3.65
LINC00565-201ENST00000562710 SUPT5HO00267 1087 aaKnown RBP37.52■■■■□ 3.6
LINC00565-201ENST00000562710 DCAF8L2P0C7V8 631 aa36.87■■■■□ 3.49
LINC00565-201ENST00000562710 DCAF1Q9Y4B6 1507 aa36.75■■■■□ 3.47
LINC00565-201ENST00000562710 CHIC1Q5VXU3 224 aa36.65■■■■□ 3.46
LINC00565-201ENST00000562710 MYO15BQ96JP2 1530 aa36.56■■■■□ 3.44
LINC00565-201ENST00000562710 HRCP23327 699 aa35.89■■■■□ 3.34
LINC00565-201ENST00000562710 ABCC9O60706 1549 aa35.79■■■■□ 3.32
LINC00565-201ENST00000562710 PCGF6Q9BYE7 350 aa35.68■■■■□ 3.3
LINC00565-201ENST00000562710 SCRIBQ14160 1630 aa35.55■■■■□ 3.28
LINC00565-201ENST00000562710 LOC105371045A0A1W2PR82 267 aa35.52■■■■□ 3.28
LINC00565-201ENST00000562710 RSF1Q96T23 1441 aaPredicted RBP35.45■■■■□ 3.27
LINC00565-201ENST00000562710 RB1CC1Q8TDY2 1594 aa35.13■■■■□ 3.21
LINC00565-201ENST00000562710 NACADO15069 1562 aa35.04■■■■□ 3.2
LINC00565-201ENST00000562710 TRIM26Q12899 539 aaPredicted RBP35.03■■■■□ 3.2
LINC00565-201ENST00000562710 PPARGC1BQ86YN6 1023 aaKnown RBP35.03■■■■□ 3.2
LINC00565-201ENST00000562710 TRIM41Q8WV44 630 aa34.98■■■■□ 3.19
LINC00565-201ENST00000562710 CECR2Q9BXF3 1484 aa34.83■■■■□ 3.17
LINC00565-201ENST00000562710 MROH2BQ7Z745 1585 aa34.75■■■■□ 3.15
LINC00565-201ENST00000562710 FAM9AQ8IZU1 332 aaPredicted RBP34.64■■■■□ 3.14
LINC00565-201ENST00000562710 WIZO95785 1651 aa34.6■■■■□ 3.13
LINC00565-201ENST00000562710 BAZ1AQ9NRL2 1556 aaPredicted RBP34.43■■■■□ 3.1
LINC00565-201ENST00000562710 ZEB1P37275 1124 aaPredicted RBP34.38■■■■□ 3.09
LINC00565-201ENST00000562710 EHMT2Q96KQ7 1210 aa34.28■■■■□ 3.08
LINC00565-201ENST00000562710 EIF4G1Q04637 1599 aaKnown RBP34.26■■■■□ 3.08
LINC00565-201ENST00000562710 TOP2AP11388 1531 aaKnown RBP34.07■■■■□ 3.05
LINC00565-201ENST00000562710 SMARCA4P51532 1647 aa34.03■■■■□ 3.04
LINC00565-201ENST00000562710 UNC13AQ9UPW8 1703 aa33.95■■■■□ 3.02
LINC00565-201ENST00000562710 CCDC88BA6NC98 1476 aa33.91■■■■□ 3.02
LINC00565-201ENST00000562710 SMARCA2P51531 1590 aa33.89■■■■□ 3.02
LINC00565-201ENST00000562710 ABCC8Q09428 1581 aa33.87■■■■□ 3.01
LINC00565-201ENST00000562710 WRNQ14191 1432 aaPredicted RBP eCLIP33.63■■■□□ 2.97
LINC00565-201ENST00000562710 SOGA1O94964 1423 aa33.58■■■□□ 2.97
LINC00565-201ENST00000562710 CEP162Q5TB80 1403 aa33.56■■■□□ 2.96
LINC00565-201ENST00000562710 EEA1Q15075 1411 aa33.53■■■□□ 2.96
LINC00565-201ENST00000562710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.52■■■□□ 2.96
LINC00565-201ENST00000562710 TNIKQ9UKE5 1360 aa33.52■■■□□ 2.96
LINC00565-201ENST00000562710 BICRAQ9NZM4 1560 aa33.47■■■□□ 2.95
LINC00565-201ENST00000562710 CCER1Q8TC90 406 aaPredicted RBP33.47■■■□□ 2.95
LINC00565-201ENST00000562710 CSRNP3Q8WYN3 585 aa33.44■■■□□ 2.94
LINC00565-201ENST00000562710 RUSC2Q8N2Y8 1516 aa33.41■■■□□ 2.94
LINC00565-201ENST00000562710 PEG3Q9GZU2 1588 aa33.4■■■□□ 2.94
LINC00565-201ENST00000562710 PABPN1Q86U42 306 aaKnown RBP eCLIP33.36■■■□□ 2.93
LINC00565-201ENST00000562710 UBTFP17480 764 aaKnown RBP33.28■■■□□ 2.92
LINC00565-201ENST00000562710 GOLGA3Q08378 1498 aa33.28■■■□□ 2.92
LINC00565-201ENST00000562710 TTBK1Q5TCY1 1321 aaPredicted RBP33.25■■■□□ 2.91
LINC00565-201ENST00000562710 SCAF1Q9H7N4 1312 aaKnown RBP33.16■■■□□ 2.9
LINC00565-201ENST00000562710 SYNJ1O43426 1573 aa33.14■■■□□ 2.89
LINC00565-201ENST00000562710 ATAD2BQ9ULI0 1458 aa33.08■■■□□ 2.89
LINC00565-201ENST00000562710 CEP164Q9UPV0 1460 aa33.08■■■□□ 2.89
LINC00565-201ENST00000562710 KIF21BO75037 1637 aa33.07■■■□□ 2.88
LINC00565-201ENST00000562710 BAZ1BQ9UIG0 1483 aaKnown RBP33■■■□□ 2.87
LINC00565-201ENST00000562710 DIEXFQ68CQ4 756 aaKnown RBP32.94■■■□□ 2.86
LINC00565-201ENST00000562710 CLIP1P30622 1438 aa32.89■■■□□ 2.86
LINC00565-201ENST00000562710 ACIN1Q9UKV3 1341 aaKnown RBP32.82■■■□□ 2.84
LINC00565-201ENST00000562710 VPS8Q8N3P4 1428 aa32.8■■■□□ 2.84
LINC00565-201ENST00000562710 PELP1Q8IZL8 1130 aaKnown RBP32.78■■■□□ 2.84
LINC00565-201ENST00000562710 RAPGEF2Q9Y4G8 1499 aa32.77■■■□□ 2.84
LINC00565-201ENST00000562710 TOP2BQ02880 1626 aa32.74■■■□□ 2.83
LINC00565-201ENST00000562710 NEUROD1Q13562 356 aa32.73■■■□□ 2.83
LINC00565-201ENST00000562710 ZNF316A6NFI3 1004 aaPredicted RBP32.67■■■□□ 2.82
LINC00565-201ENST00000562710 HNRNPUL2Q1KMD3 747 aaKnown RBP32.65■■■□□ 2.82
LINC00565-201ENST00000562710 BIVM-ERCC5R4GMW8 1640 aa32.64■■■□□ 2.82
LINC00565-201ENST00000562710 CENPBP07199 599 aaPredicted RBP32.61■■■□□ 2.81
LINC00565-201ENST00000562710 APLP2Q06481 763 aa32.61■■■□□ 2.81
LINC00565-201ENST00000562710 ERICH3Q5RHP9 1530 aa32.5■■■□□ 2.79
LINC00565-201ENST00000562710 RANGAP1P46060 587 aaPredicted RBP32.48■■■□□ 2.79
LINC00565-201ENST00000562710 PRXQ9BXM0 1461 aa32.47■■■□□ 2.79
LINC00565-201ENST00000562710 HMGXB3Q12766 1538 aa32.45■■■□□ 2.78
LINC00565-201ENST00000562710 NCAPD3P42695 1498 aa32.41■■■□□ 2.78
LINC00565-201ENST00000562710 GTF3C3Q9Y5Q9 886 aa32.41■■■□□ 2.78
LINC00565-201ENST00000562710 CUX1P39880 1505 aa32.35■■■□□ 2.77
LINC00565-201ENST00000562710 ARAP1Q96P48 1450 aa32.34■■■□□ 2.77
LINC00565-201ENST00000562710 KIF27Q86VH2 1401 aa32.26■■■□□ 2.75
LINC00565-201ENST00000562710 CFTRP13569 1480 aa32.22■■■□□ 2.75
LINC00565-201ENST00000562710 MIER1Q8N108 512 aa32.2■■■□□ 2.74
LINC00565-201ENST00000562710 CLSPNQ9HAW4 1339 aa32.18■■■□□ 2.74
LINC00565-201ENST00000562710 KANK4Q5T7N3 995 aaPredicted RBP32.16■■■□□ 2.74
LINC00565-201ENST00000562710 DHX57Q6P158 1386 aaKnown RBP32.11■■■□□ 2.73
LINC00565-201ENST00000562710 YTHDC1Q96MU7 727 aaKnown RBP32.1■■■□□ 2.73
LINC00565-201ENST00000562710 RRBP1Q9P2E9 1410 aaKnown RBP32.07■■■□□ 2.73
LINC00565-201ENST00000562710 PRDM2Q13029 1718 aa32.04■■■□□ 2.72
LINC00565-201ENST00000562710 ARHGAP35Q9NRY4 1499 aa32.03■■■□□ 2.72
LINC00565-201ENST00000562710 CUX2O14529 1486 aa31.94■■■□□ 2.7
LINC00565-201ENST00000562710 CCNB3Q8WWL7 1395 aa31.9■■■□□ 2.7
LINC00565-201ENST00000562710 IGF1RP08069 1367 aa31.87■■■□□ 2.69
LINC00565-201ENST00000562710 CADPSQ9ULU8 1353 aa31.79■■■□□ 2.68
LINC00565-201ENST00000562710 MAP3K1Q13233 1512 aa31.77■■■□□ 2.68
LINC00565-201ENST00000562710 TIAM1Q13009 1591 aa31.75■■■□□ 2.67
LINC00565-201ENST00000562710 CARMIL1Q5VZK9 1371 aa31.74■■■□□ 2.67
LINC00565-201ENST00000562710 FGD5Q6ZNL6 1462 aa31.73■■■□□ 2.67
LINC00565-201ENST00000562710 ITGAEP38570 1179 aa31.67■■■□□ 2.66
LINC00565-201ENST00000562710 RAB3GAP2Q9H2M9 1393 aa31.63■■■□□ 2.65
LINC00565-201ENST00000562710 LRRC9Q6ZRR7 1453 aa31.61■■■□□ 2.65
LINC00565-201ENST00000562710 MAPKBP1O60336 1514 aa31.56■■■□□ 2.64
LINC00565-201ENST00000562710 FHAD1B1AJZ9 1412 aa31.55■■■□□ 2.64
LINC00565-201ENST00000562710 PHLDB1Q86UU1 1377 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms