RNA–Protein interactions for RNA: ENST00000421798.4

PNMA6A-201, Transcript of PNMA family member 6A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PNMA6A, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6A-201ENST00000421798 NISCHQ9Y2I1 1504 aa47.74■■■■■ 5.23
PNMA6A-201ENST00000421798 CCDC180Q9P1Z9 1646 aa41.07■■■■■ 4.16
PNMA6A-201ENST00000421798 ZCCHC6Q5VYS8 1495 aaKnown RBP40.24■■■■■ 4.03
PNMA6A-201ENST00000421798 SHROOM4Q9ULL8 1493 aa39.93■■■■□ 3.98
PNMA6A-201ENST00000421798 DCAF8L2P0C7V8 631 aa39.61■■■■□ 3.93
PNMA6A-201ENST00000421798 DCAF1Q9Y4B6 1507 aa39.24■■■■□ 3.87
PNMA6A-201ENST00000421798 SUPT5HO00267 1087 aaKnown RBP38.74■■■■□ 3.79
PNMA6A-201ENST00000421798 ABCC9O60706 1549 aa38.62■■■■□ 3.77
PNMA6A-201ENST00000421798 MYO15BQ96JP2 1530 aa38.43■■■■□ 3.74
PNMA6A-201ENST00000421798 SCRIBQ14160 1630 aa38.25■■■■□ 3.71
PNMA6A-201ENST00000421798 NACADO15069 1562 aa38.12■■■■□ 3.69
PNMA6A-201ENST00000421798 RB1CC1Q8TDY2 1594 aa37.67■■■■□ 3.62
PNMA6A-201ENST00000421798 RSF1Q96T23 1441 aaPredicted RBP37.42■■■■□ 3.58
PNMA6A-201ENST00000421798 CHIC1Q5VXU3 224 aa37.33■■■■□ 3.57
PNMA6A-201ENST00000421798 CECR2Q9BXF3 1484 aa37.26■■■■□ 3.56
PNMA6A-201ENST00000421798 UNC13AQ9UPW8 1703 aa37.13■■■■□ 3.53
PNMA6A-201ENST00000421798 MROH2BQ7Z745 1585 aa37.06■■■■□ 3.52
PNMA6A-201ENST00000421798 WIZO95785 1651 aa36.82■■■■□ 3.49
PNMA6A-201ENST00000421798 BAZ1AQ9NRL2 1556 aaPredicted RBP36.74■■■■□ 3.47
PNMA6A-201ENST00000421798 PABPN1Q86U42 306 aaKnown RBP eCLIP36.7■■■■□ 3.47
PNMA6A-201ENST00000421798 BICRAQ9NZM4 1560 aa36.69■■■■□ 3.46
PNMA6A-201ENST00000421798 SMARCA4P51532 1647 aa36.55■■■■□ 3.44
PNMA6A-201ENST00000421798 TOP2AP11388 1531 aaKnown RBP36.26■■■■□ 3.39
PNMA6A-201ENST00000421798 TRIM41Q8WV44 630 aa36.18■■■■□ 3.38
PNMA6A-201ENST00000421798 LOC105371045A0A1W2PR82 267 aa36.14■■■■□ 3.38
PNMA6A-201ENST00000421798 CCDC88BA6NC98 1476 aa36.05■■■■□ 3.36
PNMA6A-201ENST00000421798 SMARCA2P51531 1590 aa36.03■■■■□ 3.36
PNMA6A-201ENST00000421798 EIF4G1Q04637 1599 aaKnown RBP36.01■■■■□ 3.36
PNMA6A-201ENST00000421798 PEG3Q9GZU2 1588 aa35.93■■■■□ 3.34
PNMA6A-201ENST00000421798 FAM9AQ8IZU1 332 aaPredicted RBP35.81■■■■□ 3.32
PNMA6A-201ENST00000421798 ATAD2BQ9ULI0 1458 aa35.79■■■■□ 3.32
PNMA6A-201ENST00000421798 ABCC8Q09428 1581 aa35.66■■■■□ 3.3
PNMA6A-201ENST00000421798 BAZ1BQ9UIG0 1483 aaKnown RBP35.63■■■■□ 3.29
PNMA6A-201ENST00000421798 EHMT2Q96KQ7 1210 aa35.48■■■■□ 3.27
PNMA6A-201ENST00000421798 HRCP23327 699 aa35.4■■■■□ 3.26
PNMA6A-201ENST00000421798 NCAPD3P42695 1498 aa35.26■■■■□ 3.23
PNMA6A-201ENST00000421798 PCGF6Q9BYE7 350 aa35.22■■■■□ 3.23
PNMA6A-201ENST00000421798 HMGXB3Q12766 1538 aa35.21■■■■□ 3.23
PNMA6A-201ENST00000421798 WRNQ14191 1432 aaPredicted RBP eCLIP35.17■■■■□ 3.22
PNMA6A-201ENST00000421798 SOGA1O94964 1423 aa35.14■■■■□ 3.22
PNMA6A-201ENST00000421798 SYNJ1O43426 1573 aa35.07■■■■□ 3.2
PNMA6A-201ENST00000421798 RUSC2Q8N2Y8 1516 aa35.02■■■■□ 3.2
PNMA6A-201ENST00000421798 EEA1Q15075 1411 aa34.84■■■■□ 3.17
PNMA6A-201ENST00000421798 CSRNP3Q8WYN3 585 aa34.83■■■■□ 3.17
PNMA6A-201ENST00000421798 CC2D2AQ9P2K1 1620 aa34.83■■■■□ 3.17
PNMA6A-201ENST00000421798 TRIM26Q12899 539 aaPredicted RBP34.79■■■■□ 3.16
PNMA6A-201ENST00000421798 CFTRP13569 1480 aa34.73■■■■□ 3.15
PNMA6A-201ENST00000421798 TOP2BQ02880 1626 aa34.72■■■■□ 3.15
PNMA6A-201ENST00000421798 BIVM-ERCC5R4GMW8 1640 aa34.64■■■■□ 3.14
PNMA6A-201ENST00000421798 TNIKQ9UKE5 1360 aa34.59■■■■□ 3.13
PNMA6A-201ENST00000421798 CEP162Q5TB80 1403 aa34.58■■■■□ 3.13
PNMA6A-201ENST00000421798 UBTFP17480 764 aaKnown RBP34.57■■■■□ 3.12
PNMA6A-201ENST00000421798 CUX1P39880 1505 aa34.57■■■■□ 3.12
PNMA6A-201ENST00000421798 GOLGA3Q08378 1498 aa34.56■■■■□ 3.12
PNMA6A-201ENST00000421798 PPARGC1BQ86YN6 1023 aaKnown RBP34.53■■■■□ 3.12
PNMA6A-201ENST00000421798 PRDM2Q13029 1718 aa34.49■■■■□ 3.11
PNMA6A-201ENST00000421798 CADPSQ9ULU8 1353 aa34.49■■■■□ 3.11
PNMA6A-201ENST00000421798 CEP164Q9UPV0 1460 aa34.46■■■■□ 3.11
PNMA6A-201ENST00000421798 KIF21BO75037 1637 aa34.45■■■■□ 3.11
PNMA6A-201ENST00000421798 RAPGEF2Q9Y4G8 1499 aa34.34■■■■□ 3.09
PNMA6A-201ENST00000421798 NESP48681 1621 aa34.17■■■■□ 3.06
PNMA6A-201ENST00000421798 FANCD2Q9BXW9 1451 aa34.16■■■■□ 3.06
PNMA6A-201ENST00000421798 KIF27Q86VH2 1401 aa34.15■■■■□ 3.06
PNMA6A-201ENST00000421798 PRXQ9BXM0 1461 aa34.13■■■■□ 3.05
PNMA6A-201ENST00000421798 TTBK1Q5TCY1 1321 aaPredicted RBP34.12■■■■□ 3.05
PNMA6A-201ENST00000421798 DNAJC5BQ9UF47 199 aa34.12■■■■□ 3.05
PNMA6A-201ENST00000421798 CLIP1P30622 1438 aa34.12■■■■□ 3.05
PNMA6A-201ENST00000421798 RANGAP1P46060 587 aaPredicted RBP34.07■■■■□ 3.04
PNMA6A-201ENST00000421798 FGD5Q6ZNL6 1462 aa34.06■■■■□ 3.04
PNMA6A-201ENST00000421798 ERICH3Q5RHP9 1530 aa34.05■■■■□ 3.04
PNMA6A-201ENST00000421798 CUX2O14529 1486 aa34■■■■□ 3.03
PNMA6A-201ENST00000421798 LAMC3Q9Y6N6 1575 aa33.9■■■■□ 3.02
PNMA6A-201ENST00000421798 DNMBPQ6XZF7 1577 aa33.89■■■■□ 3.02
PNMA6A-201ENST00000421798 VPS8Q8N3P4 1428 aa33.87■■■■□ 3.01
PNMA6A-201ENST00000421798 IGF1RP08069 1367 aa33.87■■■■□ 3.01
PNMA6A-201ENST00000421798 TOPBP1Q92547 1522 aa33.86■■■■□ 3.01
PNMA6A-201ENST00000421798 RAD54L2Q9Y4B4 1467 aa33.81■■■■□ 3
PNMA6A-201ENST00000421798 POLA1P09884 1462 aaPredicted RBP33.78■■■■□ 3
PNMA6A-201ENST00000421798 ZEB1P37275 1124 aaPredicted RBP33.78■■■■□ 3
PNMA6A-201ENST00000421798 URB2Q14146 1524 aaKnown RBP33.73■■■□□ 2.99
PNMA6A-201ENST00000421798 ARAP1Q96P48 1450 aa33.71■■■□□ 2.99
PNMA6A-201ENST00000421798 CARMIL1Q5VZK9 1371 aa33.69■■■□□ 2.98
PNMA6A-201ENST00000421798 ABCA10Q8WWZ4 1543 aa33.67■■■□□ 2.98
PNMA6A-201ENST00000421798 PDS5BQ9NTI5 1447 aa33.66■■■□□ 2.98
PNMA6A-201ENST00000421798 KIF21AQ7Z4S6 1674 aa33.63■■■□□ 2.97
PNMA6A-201ENST00000421798 APLP2Q06481 763 aa33.58■■■□□ 2.97
PNMA6A-201ENST00000421798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.57■■■□□ 2.97
PNMA6A-201ENST00000421798 ARHGAP35Q9NRY4 1499 aa33.56■■■□□ 2.96
PNMA6A-201ENST00000421798 WDR97A6NE52 1622 aa33.49■■■□□ 2.95
PNMA6A-201ENST00000421798 TDRD9Q8NDG6 1382 aaKnown RBP33.42■■■□□ 2.94
PNMA6A-201ENST00000421798 CCER1Q8TC90 406 aaPredicted RBP33.4■■■□□ 2.94
PNMA6A-201ENST00000421798 PELP1Q8IZL8 1130 aaKnown RBP33.37■■■□□ 2.93
PNMA6A-201ENST00000421798 KANK4Q5T7N3 995 aaPredicted RBP33.36■■■□□ 2.93
PNMA6A-201ENST00000421798 CUL7Q14999 1698 aa33.36■■■□□ 2.93
PNMA6A-201ENST00000421798 ABCA5Q8WWZ7 1642 aa33.35■■■□□ 2.93
PNMA6A-201ENST00000421798 GAPVD1Q14C86 1478 aa33.29■■■□□ 2.92
PNMA6A-201ENST00000421798 HNRNPUL2Q1KMD3 747 aaKnown RBP33.29■■■□□ 2.92
PNMA6A-201ENST00000421798 TARBP1Q13395 1621 aaKnown RBP33.27■■■□□ 2.92
PNMA6A-201ENST00000421798 P3H3Q8IVL6 736 aa33.22■■■□□ 2.91
PNMA6A-201ENST00000421798 MRC2Q9UBG0 1479 aa33.22■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms