RNA–Protein interactions for RNA: ENST00000339882.9

CCNYL1-202, Transcript of cyclin Y like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNYL1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1-202ENST00000339882 NISCHQ9Y2I1 1504 aa41.02■■■■■ 4.16
CCNYL1-202ENST00000339882 SHROOM4Q9ULL8 1493 aa36.2■■■■□ 3.39
CCNYL1-202ENST00000339882 SUPT5HO00267 1087 aaKnown RBP35.91■■■■□ 3.34
CCNYL1-202ENST00000339882 HRCP23327 699 aa35.8■■■■□ 3.32
CCNYL1-202ENST00000339882 MYO15BQ96JP2 1530 aa35.45■■■■□ 3.27
CCNYL1-202ENST00000339882 PCGF6Q9BYE7 350 aa35.28■■■■□ 3.24
CCNYL1-202ENST00000339882 CHIC1Q5VXU3 224 aa35.19■■■■□ 3.22
CCNYL1-202ENST00000339882 PPARGC1BQ86YN6 1023 aaKnown RBP35.19■■■■□ 3.22
CCNYL1-202ENST00000339882 ZCCHC6Q5VYS8 1495 aaKnown RBP34.87■■■■□ 3.17
CCNYL1-202ENST00000339882 DCAF1Q9Y4B6 1507 aa34.48■■■■□ 3.11
CCNYL1-202ENST00000339882 LOC105371045A0A1W2PR82 267 aa34.41■■■■□ 3.1
CCNYL1-202ENST00000339882 DCAF8L2P0C7V8 631 aa34.24■■■■□ 3.07
CCNYL1-202ENST00000339882 CCDC180Q9P1Z9 1646 aa34.18■■■■□ 3.06
CCNYL1-202ENST00000339882 TRIM26Q12899 539 aaPredicted RBP34.14■■■■□ 3.06
CCNYL1-202ENST00000339882 PELP1Q8IZL8 1130 aaKnown RBP33.89■■■■□ 3.02
CCNYL1-202ENST00000339882 SCAF1Q9H7N4 1312 aaKnown RBP33.75■■■□□ 2.99
CCNYL1-202ENST00000339882 ZEB1P37275 1124 aaPredicted RBP33.67■■■□□ 2.98
CCNYL1-202ENST00000339882 FAM9AQ8IZU1 332 aaPredicted RBP33.23■■■□□ 2.91
CCNYL1-202ENST00000339882 TRIM41Q8WV44 630 aa33.18■■■□□ 2.9
CCNYL1-202ENST00000339882 EHMT2Q96KQ7 1210 aa33.14■■■□□ 2.89
CCNYL1-202ENST00000339882 ABCC9O60706 1549 aa33.11■■■□□ 2.89
CCNYL1-202ENST00000339882 ACIN1Q9UKV3 1341 aaKnown RBP32.96■■■□□ 2.87
CCNYL1-202ENST00000339882 RSF1Q96T23 1441 aaPredicted RBP32.95■■■□□ 2.86
CCNYL1-202ENST00000339882 NEUROD1Q13562 356 aa32.94■■■□□ 2.86
CCNYL1-202ENST00000339882 RB1CC1Q8TDY2 1594 aa32.84■■■□□ 2.85
CCNYL1-202ENST00000339882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.82■■■□□ 2.84
CCNYL1-202ENST00000339882 GTF3C3Q9Y5Q9 886 aa32.71■■■□□ 2.83
CCNYL1-202ENST00000339882 CCER1Q8TC90 406 aaPredicted RBP32.69■■■□□ 2.82
CCNYL1-202ENST00000339882 SCRIBQ14160 1630 aa32.63■■■□□ 2.81
CCNYL1-202ENST00000339882 DIEXFQ68CQ4 756 aaKnown RBP32.58■■■□□ 2.81
CCNYL1-202ENST00000339882 CENPBP07199 599 aaPredicted RBP32.52■■■□□ 2.8
CCNYL1-202ENST00000339882 MYT1Q01538 1121 aa32.39■■■□□ 2.78
CCNYL1-202ENST00000339882 TTBK1Q5TCY1 1321 aaPredicted RBP32.29■■■□□ 2.76
CCNYL1-202ENST00000339882 CECR2Q9BXF3 1484 aa32.17■■■□□ 2.74
CCNYL1-202ENST00000339882 YTHDC1Q96MU7 727 aaKnown RBP32.09■■■□□ 2.73
CCNYL1-202ENST00000339882 MROH2BQ7Z745 1585 aa32.09■■■□□ 2.73
CCNYL1-202ENST00000339882 ZNF316A6NFI3 1004 aaPredicted RBP31.99■■■□□ 2.71
CCNYL1-202ENST00000339882 WIZO95785 1651 aa31.99■■■□□ 2.71
CCNYL1-202ENST00000339882 WRNQ14191 1432 aaPredicted RBP eCLIP31.91■■■□□ 2.7
CCNYL1-202ENST00000339882 CEP162Q5TB80 1403 aa31.85■■■□□ 2.69
CCNYL1-202ENST00000339882 EIF4G1Q04637 1599 aaKnown RBP31.84■■■□□ 2.69
CCNYL1-202ENST00000339882 MIER1Q8N108 512 aa31.81■■■□□ 2.68
CCNYL1-202ENST00000339882 CCDC88BA6NC98 1476 aa31.73■■■□□ 2.67
CCNYL1-202ENST00000339882 ABCC8Q09428 1581 aa31.73■■■□□ 2.67
CCNYL1-202ENST00000339882 BAZ1AQ9NRL2 1556 aaPredicted RBP31.69■■■□□ 2.66
CCNYL1-202ENST00000339882 SOGA1O94964 1423 aa31.62■■■□□ 2.65
CCNYL1-202ENST00000339882 TNIKQ9UKE5 1360 aa31.6■■■□□ 2.65
CCNYL1-202ENST00000339882 UBTFP17480 764 aaKnown RBP31.53■■■□□ 2.64
CCNYL1-202ENST00000339882 HNRNPUL2Q1KMD3 747 aaKnown RBP31.52■■■□□ 2.64
CCNYL1-202ENST00000339882 RUSC2Q8N2Y8 1516 aa31.45■■■□□ 2.63
CCNYL1-202ENST00000339882 NACADO15069 1562 aa31.44■■■□□ 2.62
CCNYL1-202ENST00000339882 CSRNP3Q8WYN3 585 aa31.42■■■□□ 2.62
CCNYL1-202ENST00000339882 TOP2AP11388 1531 aaKnown RBP31.31■■■□□ 2.6
CCNYL1-202ENST00000339882 GOLGA3Q08378 1498 aa31.26■■■□□ 2.6
CCNYL1-202ENST00000339882 EEA1Q15075 1411 aa31.25■■■□□ 2.59
CCNYL1-202ENST00000339882 SMARCA2P51531 1590 aa31.25■■■□□ 2.59
CCNYL1-202ENST00000339882 SUPT16HQ9Y5B9 1047 aaKnown RBP31.2■■■□□ 2.59
CCNYL1-202ENST00000339882 SMARCA4P51532 1647 aa31.05■■■□□ 2.56
CCNYL1-202ENST00000339882 CLIP1P30622 1438 aa31.03■■■□□ 2.56
CCNYL1-202ENST00000339882 TSHZ2Q9NRE2 1034 aa30.98■■■□□ 2.55
CCNYL1-202ENST00000339882 CLSPNQ9HAW4 1339 aa30.98■■■□□ 2.55
CCNYL1-202ENST00000339882 VPS8Q8N3P4 1428 aa30.96■■■□□ 2.55
CCNYL1-202ENST00000339882 CEP164Q9UPV0 1460 aa30.95■■■□□ 2.54
CCNYL1-202ENST00000339882 APLP2Q06481 763 aa30.94■■■□□ 2.54
CCNYL1-202ENST00000339882 RANGAP1P46060 587 aaPredicted RBP30.93■■■□□ 2.54
CCNYL1-202ENST00000339882 KIF21BO75037 1637 aa30.86■■■□□ 2.53
CCNYL1-202ENST00000339882 DHX57Q6P158 1386 aaKnown RBP30.86■■■□□ 2.53
CCNYL1-202ENST00000339882 ANP32EQ9BTT0 268 aa30.84■■■□□ 2.53
CCNYL1-202ENST00000339882 SYNJ1O43426 1573 aa30.77■■■□□ 2.52
CCNYL1-202ENST00000339882 RAPGEF2Q9Y4G8 1499 aa30.75■■■□□ 2.51
CCNYL1-202ENST00000339882 KCNH8Q96L42 1107 aa30.69■■■□□ 2.5
CCNYL1-202ENST00000339882 BAZ1BQ9UIG0 1483 aaKnown RBP30.65■■■□□ 2.5
CCNYL1-202ENST00000339882 BCANQ96GW7 911 aa30.65■■■□□ 2.5
CCNYL1-202ENST00000339882 BCL11AQ9H165 835 aa30.6■■■□□ 2.49
CCNYL1-202ENST00000339882 KANK4Q5T7N3 995 aaPredicted RBP30.55■■■□□ 2.48
CCNYL1-202ENST00000339882 UNC13AQ9UPW8 1703 aa30.5■■■□□ 2.47
CCNYL1-202ENST00000339882 FKBP8Q14318 412 aa30.45■■■□□ 2.47
CCNYL1-202ENST00000339882 ARAP1Q96P48 1450 aa30.41■■■□□ 2.46
CCNYL1-202ENST00000339882 ITGAEP38570 1179 aa30.37■■■□□ 2.45
CCNYL1-202ENST00000339882 RRBP1Q9P2E9 1410 aaKnown RBP30.36■■■□□ 2.45
CCNYL1-202ENST00000339882 PABPN1Q86U42 306 aaKnown RBP eCLIP30.31■■■□□ 2.44
CCNYL1-202ENST00000339882 CUX2O14529 1486 aa30.28■■■□□ 2.44
CCNYL1-202ENST00000339882 RBM19Q9Y4C8 960 aaKnown RBP30.27■■■□□ 2.44
CCNYL1-202ENST00000339882 DDX10Q13206 875 aaKnown RBP30.26■■■□□ 2.44
CCNYL1-202ENST00000339882 CCNB3Q8WWL7 1395 aa30.25■■■□□ 2.43
CCNYL1-202ENST00000339882 PEG3Q9GZU2 1588 aa30.23■■■□□ 2.43
CCNYL1-202ENST00000339882 MAPKBP1O60336 1514 aa30.2■■■□□ 2.43
CCNYL1-202ENST00000339882 RAB3GAP2Q9H2M9 1393 aa30.18■■■□□ 2.42
CCNYL1-202ENST00000339882 PRXQ9BXM0 1461 aa30.18■■■□□ 2.42
CCNYL1-202ENST00000339882 ERICH3Q5RHP9 1530 aa30.16■■■□□ 2.42
CCNYL1-202ENST00000339882 TOP2BQ02880 1626 aa30.16■■■□□ 2.42
CCNYL1-202ENST00000339882 NEFLP07196 543 aa30.14■■■□□ 2.42
CCNYL1-202ENST00000339882 TRIM52Q96A61 297 aa30.13■■■□□ 2.41
CCNYL1-202ENST00000339882 WDR97A6NE52 1622 aa30.1■■■□□ 2.41
CCNYL1-202ENST00000339882 SIN3AQ96ST3 1273 aa30.08■■■□□ 2.41
CCNYL1-202ENST00000339882 HIRIP3Q9BW71 556 aaPredicted RBP30.07■■■□□ 2.4
CCNYL1-202ENST00000339882 BICRAQ9NZM4 1560 aa30.06■■■□□ 2.4
CCNYL1-202ENST00000339882 ATAD2BQ9ULI0 1458 aa30.05■■■□□ 2.4
CCNYL1-202ENST00000339882 PPP1R15AO75807 674 aaPredicted RBP30.04■■■□□ 2.4
CCNYL1-202ENST00000339882 MSH5O43196 834 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms