Protein–RNA interactions for Protein: P09110

ACAA1, 3-ketoacyl-CoA thiolase, peroxisomal, humanhuman

Predicted RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1P09110 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
ACAA1P09110 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
ACAA1P09110 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ACAA1P09110 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ACAA1P09110 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ACAA1P09110 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.63□□□□□ -0.07
ACAA1P09110 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.63□□□□□ -0.07
ACAA1P09110 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ACAA1P09110 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.63□□□□□ -0.07
ACAA1P09110 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.63□□□□□ -0.07
ACAA1P09110 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ACAA1P09110 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.63□□□□□ -0.07
ACAA1P09110 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.63□□□□□ -0.07
ACAA1P09110 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.63□□□□□ -0.07
ACAA1P09110 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.63□□□□□ -0.07
ACAA1P09110 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.63□□□□□ -0.07
ACAA1P09110 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.63□□□□□ -0.07
ACAA1P09110 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.63□□□□□ -0.07
ACAA1P09110 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.63□□□□□ -0.07
ACAA1P09110 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.63□□□□□ -0.07
ACAA1P09110 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.63□□□□□ -0.07
ACAA1P09110 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.63□□□□□ -0.07
ACAA1P09110 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.63□□□□□ -0.07
ACAA1P09110 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ACAA1P09110 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.63□□□□□ -0.07
ACAA1P09110 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 EGFEM1P-202ENST00000431685 1563 ntBASIC14.63□□□□□ -0.07
ACAA1P09110 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.63□□□□□ -0.07
ACAA1P09110 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.63□□□□□ -0.07
ACAA1P09110 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.63□□□□□ -0.07
ACAA1P09110 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ACAA1P09110 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.63□□□□□ -0.07
ACAA1P09110 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ACAA1P09110 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ACAA1P09110 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.62□□□□□ -0.07
ACAA1P09110 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.62□□□□□ -0.07
ACAA1P09110 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ACAA1P09110 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
ACAA1P09110 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
ACAA1P09110 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
ACAA1P09110 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ACAA1P09110 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ACAA1P09110 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ACAA1P09110 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ACAA1P09110 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ACAA1P09110 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ACAA1P09110 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ACAA1P09110 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ACAA1P09110 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ACAA1P09110 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ACAA1P09110 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.62□□□□□ -0.07
ACAA1P09110 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.62□□□□□ -0.07
ACAA1P09110 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ACAA1P09110 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ACAA1P09110 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ACAA1P09110 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.62□□□□□ -0.07
ACAA1P09110 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.62□□□□□ -0.07
ACAA1P09110 AC132008.2-207ENST00000454517 770 ntBASIC14.62□□□□□ -0.07
ACAA1P09110 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.62□□□□□ -0.07
ACAA1P09110 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.62□□□□□ -0.07
ACAA1P09110 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ACAA1P09110 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.62□□□□□ -0.07
ACAA1P09110 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.62□□□□□ -0.07
ACAA1P09110 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.62□□□□□ -0.07
ACAA1P09110 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms