RNA–Protein interactions for RNA: ENST00000528182.5

SDHD-206, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3 BASIC

Gene SDHD, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-206ENST00000528182 NISCHQ9Y2I1 1504 aa44.85■■■■■ 4.77
SDHD-206ENST00000528182 CCDC180Q9P1Z9 1646 aa40.28■■■■■ 4.04
SDHD-206ENST00000528182 ABCC9O60706 1549 aa40.26■■■■■ 4.04
SDHD-206ENST00000528182 RB1CC1Q8TDY2 1594 aa38.35■■■■□ 3.73
SDHD-206ENST00000528182 NACADO15069 1562 aa38.08■■■■□ 3.69
SDHD-206ENST00000528182 DCAF8L2P0C7V8 631 aa37.88■■■■□ 3.65
SDHD-206ENST00000528182 DNAJC5BQ9UF47 199 aa37.78■■■■□ 3.64
SDHD-206ENST00000528182 MYO15BQ96JP2 1530 aa37.55■■■■□ 3.6
SDHD-206ENST00000528182 UNC13AQ9UPW8 1703 aa37.49■■■■□ 3.59
SDHD-206ENST00000528182 PABPN1Q86U42 306 aaKnown RBP eCLIP37.48■■■■□ 3.59
SDHD-206ENST00000528182 BICRAQ9NZM4 1560 aa37.21■■■■□ 3.55
SDHD-206ENST00000528182 ZCCHC6Q5VYS8 1495 aaKnown RBP37.16■■■■□ 3.54
SDHD-206ENST00000528182 DCAF1Q9Y4B6 1507 aa37.06■■■■□ 3.52
SDHD-206ENST00000528182 SHROOM4Q9ULL8 1493 aa36.73■■■■□ 3.47
SDHD-206ENST00000528182 SCRIBQ14160 1630 aa36.67■■■■□ 3.46
SDHD-206ENST00000528182 CC2D2AQ9P2K1 1620 aa36.39■■■■□ 3.42
SDHD-206ENST00000528182 EIF4G1Q04637 1599 aaKnown RBP36.31■■■■□ 3.4
SDHD-206ENST00000528182 CECR2Q9BXF3 1484 aa36.29■■■■□ 3.4
SDHD-206ENST00000528182 NCAPD3P42695 1498 aa35.15■■■■□ 3.22
SDHD-206ENST00000528182 ATAD2BQ9ULI0 1458 aa35.03■■■■□ 3.2
SDHD-206ENST00000528182 SMARCA4P51532 1647 aa35■■■■□ 3.19
SDHD-206ENST00000528182 SMARCA2P51531 1590 aa34.95■■■■□ 3.18
SDHD-206ENST00000528182 HMGXB3Q12766 1538 aa34.89■■■■□ 3.18
SDHD-206ENST00000528182 BAZ1AQ9NRL2 1556 aaPredicted RBP34.83■■■■□ 3.17
SDHD-206ENST00000528182 ERCC6Q03468 1493 aa34.79■■■■□ 3.16
SDHD-206ENST00000528182 CUX2O14529 1486 aa34.74■■■■□ 3.15
SDHD-206ENST00000528182 DNAJC5Q9H3Z4 198 aa34.74■■■■□ 3.15
SDHD-206ENST00000528182 BAZ1BQ9UIG0 1483 aaKnown RBP34.7■■■■□ 3.15
SDHD-206ENST00000528182 PEG3Q9GZU2 1588 aa34.66■■■■□ 3.14
SDHD-206ENST00000528182 NESP48681 1621 aa34.59■■■■□ 3.13
SDHD-206ENST00000528182 MROH2BQ7Z745 1585 aa34.55■■■■□ 3.12
SDHD-206ENST00000528182 LAMC3Q9Y6N6 1575 aa34.37■■■■□ 3.09
SDHD-206ENST00000528182 THOC2Q8NI27 1593 aaKnown RBP34.25■■■■□ 3.07
SDHD-206ENST00000528182 PDS5BQ9NTI5 1447 aa34.17■■■■□ 3.06
SDHD-206ENST00000528182 KIF21AQ7Z4S6 1674 aa34.16■■■■□ 3.06
SDHD-206ENST00000528182 WIZO95785 1651 aa34.15■■■■□ 3.06
SDHD-206ENST00000528182 CADPSQ9ULU8 1353 aa34.08■■■■□ 3.05
SDHD-206ENST00000528182 MRC2Q9UBG0 1479 aa33.87■■■■□ 3.01
SDHD-206ENST00000528182 RSF1Q96T23 1441 aaPredicted RBP33.82■■■■□ 3
SDHD-206ENST00000528182 WDR62O43379 1518 aa33.79■■■■□ 3
SDHD-206ENST00000528182 CEP164Q9UPV0 1460 aa33.73■■■□□ 2.99
SDHD-206ENST00000528182 TOP2AP11388 1531 aaKnown RBP33.72■■■□□ 2.99
SDHD-206ENST00000528182 CFTRP13569 1480 aa33.69■■■□□ 2.98
SDHD-206ENST00000528182 FANCD2Q9BXW9 1451 aa33.69■■■□□ 2.98
SDHD-206ENST00000528182 URB2Q14146 1524 aaKnown RBP33.4■■■□□ 2.94
SDHD-206ENST00000528182 PRDM2Q13029 1718 aa33.39■■■□□ 2.94
SDHD-206ENST00000528182 CCDC88BA6NC98 1476 aa33.32■■■□□ 2.92
SDHD-206ENST00000528182 TRIM41Q8WV44 630 aa33.2■■■□□ 2.91
SDHD-206ENST00000528182 OSCARQ8IYS5 282 aa33.16■■■□□ 2.9
SDHD-206ENST00000528182 IFT140Q96RY7 1462 aa33.05■■■□□ 2.88
SDHD-206ENST00000528182 TOPBP1Q92547 1522 aa33.05■■■□□ 2.88
SDHD-206ENST00000528182 ABCC8Q09428 1581 aa33■■■□□ 2.87
SDHD-206ENST00000528182 ZNF608Q9ULD9 1512 aaPredicted RBP32.99■■■□□ 2.87
SDHD-206ENST00000528182 DNMBPQ6XZF7 1577 aa32.93■■■□□ 2.86
SDHD-206ENST00000528182 EIF4G3O43432 1585 aaKnown RBP32.83■■■□□ 2.85
SDHD-206ENST00000528182 TARBP1Q13395 1621 aaKnown RBP32.76■■■□□ 2.83
SDHD-206ENST00000528182 RIMBP3CA6NJZ7 1639 aa32.71■■■□□ 2.83
SDHD-206ENST00000528182 RIMBP3BA6NNM3 1639 aa32.71■■■□□ 2.83
SDHD-206ENST00000528182 RIMBP3Q9UFD9 1639 aa32.71■■■□□ 2.83
SDHD-206ENST00000528182 POLA1P09884 1462 aaPredicted RBP32.71■■■□□ 2.83
SDHD-206ENST00000528182 AQRO60306 1485 aaKnown RBP eCLIP32.7■■■□□ 2.837e-7■■□□□ 14.1
SDHD-206ENST00000528182 ARHGEF11O15085 1522 aa32.61■■■□□ 2.81
SDHD-206ENST00000528182 CHD1O14646 1710 aa32.6■■■□□ 2.81
SDHD-206ENST00000528182 RAD54L2Q9Y4B4 1467 aa32.58■■■□□ 2.81
SDHD-206ENST00000528182 SOGA1O94964 1423 aa32.57■■■□□ 2.8
SDHD-206ENST00000528182 FBLN2P98095 1184 aa32.51■■■□□ 2.79
SDHD-206ENST00000528182 FGD5Q6ZNL6 1462 aa32.5■■■□□ 2.79
SDHD-206ENST00000528182 TDRD9Q8NDG6 1382 aaKnown RBP32.5■■■□□ 2.79
SDHD-206ENST00000528182 CUX1P39880 1505 aa32.46■■■□□ 2.79
SDHD-206ENST00000528182 WDR97A6NE52 1622 aa32.44■■■□□ 2.78
SDHD-206ENST00000528182 CYB5RLQ6IPT4 315 aa32.38■■■□□ 2.77
SDHD-206ENST00000528182 SNAPC4Q5SXM2 1469 aa32.36■■■□□ 2.77
SDHD-206ENST00000528182 SUPT5HO00267 1087 aaKnown RBP32.33■■■□□ 2.77
SDHD-206ENST00000528182 MAGI1Q96QZ7 1491 aaPredicted RBP32.29■■■□□ 2.76
SDHD-206ENST00000528182 GRIN2BQ13224 1484 aa32.29■■■□□ 2.76
SDHD-206ENST00000528182 ARAP1Q96P48 1450 aa32.28■■■□□ 2.76
SDHD-206ENST00000528182 CHMP7Q8WUX9 453 aaPredicted RBP32.27■■■□□ 2.76
SDHD-206ENST00000528182 SYNJ1O43426 1573 aa32.21■■■□□ 2.75
SDHD-206ENST00000528182 CLASP1Q7Z460 1538 aa32.21■■■□□ 2.75
SDHD-206ENST00000528182 SYNJ2O15056 1496 aa32.19■■■□□ 2.74
SDHD-206ENST00000528182 PBRM1Q86U86 1689 aa32.18■■■□□ 2.74
SDHD-206ENST00000528182 GAPVD1Q14C86 1478 aa32.17■■■□□ 2.74
SDHD-206ENST00000528182 ABCA10Q8WWZ4 1543 aa32.14■■■□□ 2.74
SDHD-206ENST00000528182 ABCA5Q8WWZ7 1642 aa32.09■■■□□ 2.73
SDHD-206ENST00000528182 TRHP20396 242 aaPredicted RBP32.03■■■□□ 2.72
SDHD-206ENST00000528182 WRNQ14191 1432 aaPredicted RBP eCLIP32.01■■■□□ 2.72
SDHD-206ENST00000528182 TOP2BQ02880 1626 aa31.96■■■□□ 2.71
SDHD-206ENST00000528182 BIVM-ERCC5R4GMW8 1640 aa31.96■■■□□ 2.71
SDHD-206ENST00000528182 GRIN2AQ12879 1464 aa31.87■■■□□ 2.69
SDHD-206ENST00000528182 ADAMTS12P58397 1594 aa31.85■■■□□ 2.69
SDHD-206ENST00000528182 FHAD1B1AJZ9 1412 aa31.76■■■□□ 2.68
SDHD-206ENST00000528182 NUP160Q12769 1436 aa31.75■■■□□ 2.67
SDHD-206ENST00000528182 CEP170Q5SW79 1584 aa31.75■■■□□ 2.67
SDHD-206ENST00000528182 ERICH3Q5RHP9 1530 aa31.75■■■□□ 2.67
SDHD-206ENST00000528182 ERCC6L2Q5T890 1561 aa31.68■■■□□ 2.66
SDHD-206ENST00000528182 SHROOM2Q13796 1616 aa31.64■■■□□ 2.65
SDHD-206ENST00000528182 PRG4Q92954 1404 aaPredicted RBP31.46■■■□□ 2.63
SDHD-206ENST00000528182 JPH4Q96JJ6 628 aa31.45■■■□□ 2.63
SDHD-206ENST00000528182 RUSC2Q8N2Y8 1516 aa31.39■■■□□ 2.62
SDHD-206ENST00000528182 KIF27Q86VH2 1401 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms