RNA–Protein interactions for RNA: ENST00000330263.4

MRTO4-201, Transcript of MRT4 homolog, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRTO4, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRTO4-201ENST00000330263 NISCHQ9Y2I1 1504 aa36.23■■■■□ 3.39
MRTO4-201ENST00000330263 CCDC180Q9P1Z9 1646 aa31.35■■■□□ 2.61
MRTO4-201ENST00000330263 ZCCHC6Q5VYS8 1495 aaKnown RBP30.51■■■□□ 2.47
MRTO4-201ENST00000330263 SHROOM4Q9ULL8 1493 aa30.14■■■□□ 2.42
MRTO4-201ENST00000330263 DCAF8L2P0C7V8 631 aa29.96■■■□□ 2.39
MRTO4-201ENST00000330263 DCAF1Q9Y4B6 1507 aa29.84■■■□□ 2.37
MRTO4-201ENST00000330263 ABCC9O60706 1549 aa29.6■■■□□ 2.33
MRTO4-201ENST00000330263 SUPT5HO00267 1087 aaKnown RBP29.58■■■□□ 2.33
MRTO4-201ENST00000330263 MYO15BQ96JP2 1530 aa29.33■■■□□ 2.29
MRTO4-201ENST00000330263 NACADO15069 1562 aa29.14■■■□□ 2.25
MRTO4-201ENST00000330263 SCRIBQ14160 1630 aa29.08■■■□□ 2.25
MRTO4-201ENST00000330263 CHIC1Q5VXU3 224 aa28.87■■■□□ 2.21
MRTO4-201ENST00000330263 RB1CC1Q8TDY2 1594 aa28.84■■■□□ 2.21
MRTO4-201ENST00000330263 UNC13AQ9UPW8 1703 aa28.4■■■□□ 2.14
MRTO4-201ENST00000330263 RSF1Q96T23 1441 aaPredicted RBP28.27■■■□□ 2.12
MRTO4-201ENST00000330263 CECR2Q9BXF3 1484 aa28.26■■■□□ 2.11
MRTO4-201ENST00000330263 MROH2BQ7Z745 1585 aa28.09■■■□□ 2.09
MRTO4-201ENST00000330263 BICRAQ9NZM4 1560 aa28.09■■■□□ 2.09
MRTO4-201ENST00000330263 HRCP23327 699 aa28.07■■■□□ 2.08
MRTO4-201ENST00000330263 PABPN1Q86U42 306 aaKnown RBP eCLIP28.02■■■□□ 2.08
MRTO4-201ENST00000330263 PCGF6Q9BYE7 350 aa27.97■■■□□ 2.07
MRTO4-201ENST00000330263 LOC105371045A0A1W2PR82 267 aa27.96■■■□□ 2.07
MRTO4-201ENST00000330263 BAZ1AQ9NRL2 1556 aaPredicted RBP27.91■■■□□ 2.06
MRTO4-201ENST00000330263 WIZO95785 1651 aa27.88■■■□□ 2.05
MRTO4-201ENST00000330263 SMARCA4P51532 1647 aa27.8■■■□□ 2.04
MRTO4-201ENST00000330263 TRIM41Q8WV44 630 aa27.59■■■□□ 2.01
MRTO4-201ENST00000330263 TOP2AP11388 1531 aaKnown RBP27.5■■□□□ 1.99
MRTO4-201ENST00000330263 TRIM26Q12899 539 aaPredicted RBP27.49■■□□□ 1.99
MRTO4-201ENST00000330263 PPARGC1BQ86YN6 1023 aaKnown RBP27.41■■□□□ 1.98
MRTO4-201ENST00000330263 PEG3Q9GZU2 1588 aa27.38■■□□□ 1.97
MRTO4-201ENST00000330263 SMARCA2P51531 1590 aa27.31■■□□□ 1.96
MRTO4-201ENST00000330263 FAM9AQ8IZU1 332 aaPredicted RBP27.3■■□□□ 1.96
MRTO4-201ENST00000330263 CCDC88BA6NC98 1476 aa27.29■■□□□ 1.96
MRTO4-201ENST00000330263 ATAD2BQ9ULI0 1458 aa27.28■■□□□ 1.96
MRTO4-201ENST00000330263 EIF4G1Q04637 1599 aaKnown RBP27.23■■□□□ 1.95
MRTO4-201ENST00000330263 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
MRTO4-201ENST00000330263 EHMT2Q96KQ7 1210 aa27.01■■□□□ 1.91
MRTO4-201ENST00000330263 ZEB1P37275 1124 aaPredicted RBP26.93■■□□□ 1.9
MRTO4-201ENST00000330263 NCAPD3P42695 1498 aa26.93■■□□□ 1.9
MRTO4-201ENST00000330263 HMGXB3Q12766 1538 aa26.91■■□□□ 1.9
MRTO4-201ENST00000330263 ABCC8Q09428 1581 aa26.9■■□□□ 1.9
MRTO4-201ENST00000330263 CC2D2AQ9P2K1 1620 aa26.74■■□□□ 1.87
MRTO4-201ENST00000330263 WRNQ14191 1432 aaPredicted RBP eCLIP26.57■■□□□ 1.84
MRTO4-201ENST00000330263 SOGA1O94964 1423 aa26.55■■□□□ 1.84
MRTO4-201ENST00000330263 SYNJ1O43426 1573 aa26.53■■□□□ 1.84
MRTO4-201ENST00000330263 EEA1Q15075 1411 aa26.5■■□□□ 1.83
MRTO4-201ENST00000330263 CEP162Q5TB80 1403 aa26.48■■□□□ 1.83
MRTO4-201ENST00000330263 TNIKQ9UKE5 1360 aa26.46■■□□□ 1.83
MRTO4-201ENST00000330263 CFTRP13569 1480 aa26.45■■□□□ 1.82
MRTO4-201ENST00000330263 RUSC2Q8N2Y8 1516 aa26.42■■□□□ 1.82
MRTO4-201ENST00000330263 CSRNP3Q8WYN3 585 aa26.4■■□□□ 1.82
MRTO4-201ENST00000330263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.32■■□□□ 1.8
MRTO4-201ENST00000330263 TOP2BQ02880 1626 aa26.3■■□□□ 1.8
MRTO4-201ENST00000330263 GOLGA3Q08378 1498 aa26.29■■□□□ 1.8
MRTO4-201ENST00000330263 CADPSQ9ULU8 1353 aa26.29■■□□□ 1.8
MRTO4-201ENST00000330263 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
MRTO4-201ENST00000330263 CCER1Q8TC90 406 aaPredicted RBP26.26■■□□□ 1.79
MRTO4-201ENST00000330263 UBTFP17480 764 aaKnown RBP26.26■■□□□ 1.79
MRTO4-201ENST00000330263 BIVM-ERCC5R4GMW8 1640 aa26.26■■□□□ 1.79
MRTO4-201ENST00000330263 CUX1P39880 1505 aa26.23■■□□□ 1.79
MRTO4-201ENST00000330263 DNAJC5BQ9UF47 199 aa26.19■■□□□ 1.78
MRTO4-201ENST00000330263 TTBK1Q5TCY1 1321 aaPredicted RBP26.17■■□□□ 1.78
MRTO4-201ENST00000330263 KIF21BO75037 1637 aa26.16■■□□□ 1.78
MRTO4-201ENST00000330263 CEP164Q9UPV0 1460 aa26.14■■□□□ 1.78
MRTO4-201ENST00000330263 NESP48681 1621 aa26.12■■□□□ 1.77
MRTO4-201ENST00000330263 FANCD2Q9BXW9 1451 aa26.04■■□□□ 1.76
MRTO4-201ENST00000330263 CLIP1P30622 1438 aa25.97■■□□□ 1.75
MRTO4-201ENST00000330263 LAMC3Q9Y6N6 1575 aa25.95■■□□□ 1.74
MRTO4-201ENST00000330263 RAPGEF2Q9Y4G8 1499 aa25.92■■□□□ 1.74
MRTO4-201ENST00000330263 VPS8Q8N3P4 1428 aa25.89■■□□□ 1.74
MRTO4-201ENST00000330263 FGD5Q6ZNL6 1462 aa25.88■■□□□ 1.73
MRTO4-201ENST00000330263 SCAF1Q9H7N4 1312 aaKnown RBP25.86■■□□□ 1.73
MRTO4-201ENST00000330263 KIF27Q86VH2 1401 aa25.83■■□□□ 1.73
MRTO4-201ENST00000330263 DNMBPQ6XZF7 1577 aa25.82■■□□□ 1.72
MRTO4-201ENST00000330263 TOPBP1Q92547 1522 aa25.8■■□□□ 1.72
MRTO4-201ENST00000330263 DIEXFQ68CQ4 756 aaKnown RBP25.8■■□□□ 1.72
MRTO4-201ENST00000330263 CUX2O14529 1486 aa25.77■■□□□ 1.72
MRTO4-201ENST00000330263 PRXQ9BXM0 1461 aa25.77■■□□□ 1.72
MRTO4-201ENST00000330263 URB2Q14146 1524 aaKnown RBP25.74■■□□□ 1.71
MRTO4-201ENST00000330263 PDS5BQ9NTI5 1447 aa25.74■■□□□ 1.71
MRTO4-201ENST00000330263 KIF21AQ7Z4S6 1674 aa25.73■■□□□ 1.71
MRTO4-201ENST00000330263 ERICH3Q5RHP9 1530 aa25.73■■□□□ 1.71
MRTO4-201ENST00000330263 POLA1P09884 1462 aaPredicted RBP25.72■■□□□ 1.71
MRTO4-201ENST00000330263 RAD54L2Q9Y4B4 1467 aa25.69■■□□□ 1.7
MRTO4-201ENST00000330263 APLP2Q06481 763 aa25.69■■□□□ 1.7
MRTO4-201ENST00000330263 HNRNPUL2Q1KMD3 747 aaKnown RBP25.69■■□□□ 1.7
MRTO4-201ENST00000330263 RANGAP1P46060 587 aaPredicted RBP25.64■■□□□ 1.7
MRTO4-201ENST00000330263 ACIN1Q9UKV3 1341 aaKnown RBP25.64■■□□□ 1.69
MRTO4-201ENST00000330263 IGF1RP08069 1367 aa25.62■■□□□ 1.69
MRTO4-201ENST00000330263 ZNF316A6NFI3 1004 aaPredicted RBP25.62■■□□□ 1.69
MRTO4-201ENST00000330263 ABCA10Q8WWZ4 1543 aa25.6■■□□□ 1.69
MRTO4-201ENST00000330263 ARAP1Q96P48 1450 aa25.58■■□□□ 1.69
MRTO4-201ENST00000330263 NEUROD1Q13562 356 aa25.57■■□□□ 1.68
MRTO4-201ENST00000330263 WDR97A6NE52 1622 aa25.52■■□□□ 1.68
MRTO4-201ENST00000330263 CARMIL1Q5VZK9 1371 aa25.48■■□□□ 1.67
MRTO4-201ENST00000330263 CENPBP07199 599 aaPredicted RBP25.47■■□□□ 1.67
MRTO4-201ENST00000330263 MRC2Q9UBG0 1479 aa25.44■■□□□ 1.66
MRTO4-201ENST00000330263 PELP1Q8IZL8 1130 aaKnown RBP25.41■■□□□ 1.66
MRTO4-201ENST00000330263 TDRD9Q8NDG6 1382 aaKnown RBP25.4■■□□□ 1.66
MRTO4-201ENST00000330263 ABCA5Q8WWZ7 1642 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms