RNA–Protein interactions for RNA: ENST00000303843.7

REPS2-201, Transcript of RALBP1 associated Eps domain containing 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene REPS2, Length 7,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPS2-201ENST00000303843 DCAF8L2P0C7V8 631 aa30.9■■■□□ 2.54
REPS2-201ENST00000303843 SUPT5HO00267 1087 aaKnown RBP28.68■■■□□ 2.18
REPS2-201ENST00000303843 EHMT2Q96KQ7 1210 aa28.4■■■□□ 2.14
REPS2-201ENST00000303843 SHROOM4Q9ULL8 1493 aa28.3■■■□□ 2.12
REPS2-201ENST00000303843 NISCHQ9Y2I1 1504 aa27.99■■■□□ 2.07
REPS2-201ENST00000303843 APLP2Q06481 763 aa27.43■■□□□ 1.98
REPS2-201ENST00000303843 TTBK1Q5TCY1 1321 aaPredicted RBP27.31■■□□□ 1.96
REPS2-201ENST00000303843 FAM9AQ8IZU1 332 aaPredicted RBP27.27■■□□□ 1.96
REPS2-201ENST00000303843 RANGAP1P46060 587 aaPredicted RBP27.19■■□□□ 1.94
REPS2-201ENST00000303843 ATP1B4Q9UN42 357 aaPredicted RBP26.99■■□□□ 1.91
REPS2-201ENST00000303843 PELP1Q8IZL8 1130 aaKnown RBP26.8■■□□□ 1.88
REPS2-201ENST00000303843 PCGF6Q9BYE7 350 aa26.55■■□□□ 1.84
REPS2-201ENST00000303843 TRIM41Q8WV44 630 aa26.41■■□□□ 1.82
REPS2-201ENST00000303843 UBTFP17480 764 aaKnown RBP26.37■■□□□ 1.81
REPS2-201ENST00000303843 MYT1LQ9UL68 1186 aa26.2■■□□□ 1.78
REPS2-201ENST00000303843 CCER1Q8TC90 406 aaPredicted RBP26.16■■□□□ 1.78
REPS2-201ENST00000303843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26■■□□□ 1.75
REPS2-201ENST00000303843 HNRNPUL2Q1KMD3 747 aaKnown RBP26■■□□□ 1.75
REPS2-201ENST00000303843 PPARGC1BQ86YN6 1023 aaKnown RBP25.99■■□□□ 1.75
REPS2-201ENST00000303843 ERICH6Q7L0X2 663 aa25.98■■□□□ 1.75
REPS2-201ENST00000303843 CHIC1Q5VXU3 224 aa25.91■■□□□ 1.74
REPS2-201ENST00000303843 ITGAEP38570 1179 aa25.76■■□□□ 1.71
REPS2-201ENST00000303843 POLR3GLQ9BT43 218 aa25.73■■□□□ 1.71
REPS2-201ENST00000303843 CENPBP07199 599 aaPredicted RBP25.71■■□□□ 1.71
REPS2-201ENST00000303843 YTHDC1Q96MU7 727 aaKnown RBP25.71■■□□□ 1.71
REPS2-201ENST00000303843 ZEB1P37275 1124 aaPredicted RBP25.6■■□□□ 1.69
REPS2-201ENST00000303843 CNGB1Q14028 1251 aaPredicted RBP25.57■■□□□ 1.68
REPS2-201ENST00000303843 NEFLP07196 543 aa25.56■■□□□ 1.68
REPS2-201ENST00000303843 SLC4A1APQ9BWU0 796 aaKnown RBP25.48■■□□□ 1.67
REPS2-201ENST00000303843 PABPN1Q86U42 306 aaKnown RBP eCLIP25.26■■□□□ 1.63
REPS2-201ENST00000303843 ABCC9O60706 1549 aa25.12■■□□□ 1.61
REPS2-201ENST00000303843 LOC105371045A0A1W2PR82 267 aa25.08■■□□□ 1.61
REPS2-201ENST00000303843 FBLN2P98095 1184 aa25.06■■□□□ 1.6
REPS2-201ENST00000303843 DAXXQ9UER7 740 aaPredicted RBP25.03■■□□□ 1.6
REPS2-201ENST00000303843 TRIM26Q12899 539 aaPredicted RBP24.99■■□□□ 1.59
REPS2-201ENST00000303843 FAM50AQ14320 339 aaKnown RBP24.98■■□□□ 1.59
REPS2-201ENST00000303843 TRIM52Q96A61 297 aa24.89■■□□□ 1.57
REPS2-201ENST00000303843 BCANQ96GW7 911 aa24.76■■□□□ 1.55
REPS2-201ENST00000303843 MYT1Q01538 1121 aa24.73■■□□□ 1.55
REPS2-201ENST00000303843 SLC24A1O60721 1099 aa24.71■■□□□ 1.55
REPS2-201ENST00000303843 ZNF326Q5BKZ1 582 aaKnown RBP24.7■■□□□ 1.54
REPS2-201ENST00000303843 ARID3CA6NKF2 412 aa24.69■■□□□ 1.54
REPS2-201ENST00000303843 NEUROD1Q13562 356 aa24.69■■□□□ 1.54
REPS2-201ENST00000303843 CLSPNQ9HAW4 1339 aa24.68■■□□□ 1.54
REPS2-201ENST00000303843 PLPPR3Q6T4P5 718 aa24.62■■□□□ 1.53
REPS2-201ENST00000303843 HRCP23327 699 aa24.6■■□□□ 1.53
REPS2-201ENST00000303843 BCL11AQ9H165 835 aa24.55■■□□□ 1.52
REPS2-201ENST00000303843 P3H3Q8IVL6 736 aa24.51■■□□□ 1.51
REPS2-201ENST00000303843 ZNF316A6NFI3 1004 aaPredicted RBP24.44■■□□□ 1.5
REPS2-201ENST00000303843 ZNF777Q9ULD5 760 aaPredicted RBP24.38■■□□□ 1.49
REPS2-201ENST00000303843 ESF1Q9H501 851 aaKnown RBP24.32■■□□□ 1.48
REPS2-201ENST00000303843 ZBTB47Q9UFB7 747 aaPredicted RBP24.29■■□□□ 1.48
REPS2-201ENST00000303843 DIEXFQ68CQ4 756 aaKnown RBP24.23■■□□□ 1.47
REPS2-201ENST00000303843 STAG3Q9UJ98 1225 aa24.18■■□□□ 1.46
REPS2-201ENST00000303843 CHGAP10645 457 aaKnown RBP24.17■■□□□ 1.46
REPS2-201ENST00000303843 CANXP27824 592 aaKnown RBP24.16■■□□□ 1.46
REPS2-201ENST00000303843 NEFMP07197 916 aa24.16■■□□□ 1.46
REPS2-201ENST00000303843 ANP32CO43423 234 aa24.09■■□□□ 1.45
REPS2-201ENST00000303843 NPM1P06748 294 aaKnown RBP eCLIP24.07■■□□□ 1.44
REPS2-201ENST00000303843 RTL5Q5HYW3 569 aaPredicted RBP24.07■■□□□ 1.44
REPS2-201ENST00000303843 CDK11AQ9UQ88 783 aaPredicted RBP23.94■■□□□ 1.42
REPS2-201ENST00000303843 SCAF1Q9H7N4 1312 aaKnown RBP23.93■■□□□ 1.42
REPS2-201ENST00000303843 SCRIBQ14160 1630 aa23.91■■□□□ 1.42
REPS2-201ENST00000303843 SENP3Q9H4L4 574 aaPredicted RBP23.88■■□□□ 1.41
REPS2-201ENST00000303843 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.87■■□□□ 1.41
REPS2-201ENST00000303843 PLEKHG5O94827 1062 aa23.85■■□□□ 1.41
REPS2-201ENST00000303843 A0A0G2JS52 829 aa23.84■■□□□ 1.41
REPS2-201ENST00000303843 CSRNP3Q8WYN3 585 aa23.79■■□□□ 1.4
REPS2-201ENST00000303843 CHIC2Q9UKJ5 165 aa23.71■■□□□ 1.39
REPS2-201ENST00000303843 ZBTB7CA1YPR0 619 aa23.68■■□□□ 1.38
REPS2-201ENST00000303843 CHMP7Q8WUX9 453 aaPredicted RBP23.65■■□□□ 1.38
REPS2-201ENST00000303843 SALL2Q9Y467 1007 aaPredicted RBP23.65■■□□□ 1.38
REPS2-201ENST00000303843 KDM2AQ9Y2K7 1162 aa23.57■■□□□ 1.36
REPS2-201ENST00000303843 NPM2Q86SE8 214 aaKnown RBP23.57■■□□□ 1.36
REPS2-201ENST00000303843 C14orf37Q86TY3 774 aa23.56■■□□□ 1.36
REPS2-201ENST00000303843 KCNH8Q96L42 1107 aa23.55■■□□□ 1.36
REPS2-201ENST00000303843 TONSLQ96HA7 1378 aa23.54■■□□□ 1.36
REPS2-201ENST00000303843 GTF3C3Q9Y5Q9 886 aa23.53■■□□□ 1.36
REPS2-201ENST00000303843 ARID4BQ4LE39 1312 aaPredicted RBP23.49■■□□□ 1.35
REPS2-201ENST00000303843 FAM9BQ8IZU0 186 aa23.46■■□□□ 1.35
REPS2-201ENST00000303843 TSPY4P0CV99 314 aa23.45■■□□□ 1.34
REPS2-201ENST00000303843 TSPY10P0CW01 314 aa23.45■■□□□ 1.34
REPS2-201ENST00000303843 PPP1R15AO75807 674 aaPredicted RBP23.43■■□□□ 1.34
REPS2-201ENST00000303843 HSP90AA1P07900 732 aaKnown RBP23.42■■□□□ 1.34
REPS2-201ENST00000303843 HAP1P54257 671 aaPredicted RBP23.38■■□□□ 1.33
REPS2-201ENST00000303843 DDX10Q13206 875 aaKnown RBP23.34■■□□□ 1.33
REPS2-201ENST00000303843 ANP32AP39687 249 aaKnown RBP23.33■■□□□ 1.33
REPS2-201ENST00000303843 MTUS2Q5JR59 1369 aa23.31■■□□□ 1.32
REPS2-201ENST00000303843 HNRNPUQ00839 825 aaKnown RBP eCLIP23.31■■□□□ 1.32
REPS2-201ENST00000303843 WDR43Q15061 677 aaKnown RBP eCLIP23.3■■□□□ 1.32
REPS2-201ENST00000303843 TMC1Q8TDI8 760 aa23.29■■□□□ 1.32
REPS2-201ENST00000303843 ARXQ96QS3 562 aa23.26■■□□□ 1.31
REPS2-201ENST00000303843 RRP7BPQ9NSQ0 103 aa23.24■■□□□ 1.31
REPS2-201ENST00000303843 TRHP20396 242 aaPredicted RBP23.22■■□□□ 1.31
REPS2-201ENST00000303843 HIRIP3Q9BW71 556 aaPredicted RBP23.21■■□□□ 1.31
REPS2-201ENST00000303843 UPF2Q9HAU5 1272 aaKnown RBP23.2■■□□□ 1.3
REPS2-201ENST00000303843 FKBP8Q14318 412 aa23.19■■□□□ 1.3
REPS2-201ENST00000303843 RGL3Q3MIN7 710 aa23.19■■□□□ 1.3
REPS2-201ENST00000303843 LMOD2Q6P5Q4 547 aa23.16■■□□□ 1.3
REPS2-201ENST00000303843 ERCC6Q03468 1493 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms