RNA–Protein interactions for RNA: ENST00000265195.9

SIL1-201, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SIL1, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-201ENST00000265195 NISCHQ9Y2I1 1504 aa40.22■■■■■ 4.03
SIL1-201ENST00000265195 CCDC180Q9P1Z9 1646 aa35.58■■■■□ 3.29
SIL1-201ENST00000265195 ABCC9O60706 1549 aa34.53■■■■□ 3.12
SIL1-201ENST00000265195 ZCCHC6Q5VYS8 1495 aaKnown RBP33.59■■■□□ 2.97
SIL1-201ENST00000265195 DCAF8L2P0C7V8 631 aa33.42■■■□□ 2.94
SIL1-201ENST00000265195 NACADO15069 1562 aa33.35■■■□□ 2.93
SIL1-201ENST00000265195 RB1CC1Q8TDY2 1594 aa33.31■■■□□ 2.92
SIL1-201ENST00000265195 MYO15BQ96JP2 1530 aa33.27■■■□□ 2.92
SIL1-201ENST00000265195 DCAF1Q9Y4B6 1507 aa33.26■■■□□ 2.92
SIL1-201ENST00000265195 UNC13AQ9UPW8 1703 aa32.65■■■□□ 2.82
SIL1-201ENST00000265195 SCRIBQ14160 1630 aa32.53■■■□□ 2.8
SIL1-201ENST00000265195 BICRAQ9NZM4 1560 aa32.37■■■□□ 2.77
SIL1-201ENST00000265195 PABPN1Q86U42 306 aaKnown RBP eCLIP32.32■■■□□ 2.76
SIL1-201ENST00000265195 SHROOM4Q9ULL8 1493 aa32.32■■■□□ 2.76
SIL1-201ENST00000265195 EIF4G1Q04637 1599 aaKnown RBP31.46■■■□□ 2.63
SIL1-201ENST00000265195 DNAJC5BQ9UF47 199 aa31.43■■■□□ 2.62
SIL1-201ENST00000265195 CECR2Q9BXF3 1484 aa31.34■■■□□ 2.61
SIL1-201ENST00000265195 CC2D2AQ9P2K1 1620 aa31.25■■■□□ 2.59
SIL1-201ENST00000265195 SMARCA4P51532 1647 aa31.14■■■□□ 2.58
SIL1-201ENST00000265195 BAZ1AQ9NRL2 1556 aaPredicted RBP31.12■■■□□ 2.57
SIL1-201ENST00000265195 MROH2BQ7Z745 1585 aa31.04■■■□□ 2.56
SIL1-201ENST00000265195 SUPT5HO00267 1087 aaKnown RBP30.96■■■□□ 2.55
SIL1-201ENST00000265195 ATAD2BQ9ULI0 1458 aa30.88■■■□□ 2.53
SIL1-201ENST00000265195 RSF1Q96T23 1441 aaPredicted RBP30.83■■■□□ 2.53
SIL1-201ENST00000265195 PEG3Q9GZU2 1588 aa30.83■■■□□ 2.53
SIL1-201ENST00000265195 SMARCA2P51531 1590 aa30.82■■■□□ 2.52
SIL1-201ENST00000265195 NCAPD3P42695 1498 aa30.79■■■□□ 2.52
SIL1-201ENST00000265195 WIZO95785 1651 aa30.72■■■□□ 2.51
SIL1-201ENST00000265195 HMGXB3Q12766 1538 aa30.68■■■□□ 2.5
SIL1-201ENST00000265195 BAZ1BQ9UIG0 1483 aaKnown RBP30.62■■■□□ 2.49
SIL1-201ENST00000265195 TOP2AP11388 1531 aaKnown RBP30.37■■■□□ 2.45
SIL1-201ENST00000265195 CCDC88BA6NC98 1476 aa30.02■■■□□ 2.4
SIL1-201ENST00000265195 NESP48681 1621 aa30.01■■■□□ 2.39
SIL1-201ENST00000265195 LAMC3Q9Y6N6 1575 aa29.92■■■□□ 2.38
SIL1-201ENST00000265195 CADPSQ9ULU8 1353 aa29.91■■■□□ 2.38
SIL1-201ENST00000265195 CFTRP13569 1480 aa29.82■■■□□ 2.37
SIL1-201ENST00000265195 ERCC6Q03468 1493 aa29.68■■■□□ 2.34
SIL1-201ENST00000265195 PDS5BQ9NTI5 1447 aa29.67■■■□□ 2.34
SIL1-201ENST00000265195 KIF21AQ7Z4S6 1674 aa29.65■■■□□ 2.34
SIL1-201ENST00000265195 PRDM2Q13029 1718 aa29.62■■■□□ 2.33
SIL1-201ENST00000265195 FANCD2Q9BXW9 1451 aa29.58■■■□□ 2.33
SIL1-201ENST00000265195 CHIC1Q5VXU3 224 aa29.5■■■□□ 2.31
SIL1-201ENST00000265195 CEP164Q9UPV0 1460 aa29.5■■■□□ 2.31
SIL1-201ENST00000265195 THOC2Q8NI27 1593 aaKnown RBP29.47■■■□□ 2.31
SIL1-201ENST00000265195 MRC2Q9UBG0 1479 aa29.38■■■□□ 2.29
SIL1-201ENST00000265195 WDR62O43379 1518 aa29.3■■■□□ 2.28
SIL1-201ENST00000265195 URB2Q14146 1524 aaKnown RBP29.3■■■□□ 2.28
SIL1-201ENST00000265195 CUX2O14529 1486 aa29.24■■■□□ 2.27
SIL1-201ENST00000265195 TOPBP1Q92547 1522 aa29.16■■■□□ 2.26
SIL1-201ENST00000265195 ABCC8Q09428 1581 aa29.14■■■□□ 2.25
SIL1-201ENST00000265195 DNMBPQ6XZF7 1577 aa29.14■■■□□ 2.25
SIL1-201ENST00000265195 TRIM41Q8WV44 630 aa29.13■■■□□ 2.25
SIL1-201ENST00000265195 CUX1P39880 1505 aa29.09■■■□□ 2.25
SIL1-201ENST00000265195 WRNQ14191 1432 aaPredicted RBP eCLIP29■■■□□ 2.23
SIL1-201ENST00000265195 SYNJ1O43426 1573 aa28.94■■■□□ 2.22
SIL1-201ENST00000265195 POLA1P09884 1462 aaPredicted RBP28.94■■■□□ 2.22
SIL1-201ENST00000265195 FGD5Q6ZNL6 1462 aa28.91■■■□□ 2.22
SIL1-201ENST00000265195 TOP2BQ02880 1626 aa28.9■■■□□ 2.22
SIL1-201ENST00000265195 BIVM-ERCC5R4GMW8 1640 aa28.9■■■□□ 2.22
SIL1-201ENST00000265195 IFT140Q96RY7 1462 aa28.85■■■□□ 2.21
SIL1-201ENST00000265195 TARBP1Q13395 1621 aaKnown RBP28.83■■■□□ 2.21
SIL1-201ENST00000265195 RAD54L2Q9Y4B4 1467 aa28.82■■■□□ 2.2
SIL1-201ENST00000265195 SOGA1O94964 1423 aa28.79■■■□□ 2.2
SIL1-201ENST00000265195 ZNF608Q9ULD9 1512 aaPredicted RBP28.76■■■□□ 2.19
SIL1-201ENST00000265195 WDR97A6NE52 1622 aa28.68■■■□□ 2.18
SIL1-201ENST00000265195 EIF4G3O43432 1585 aaKnown RBP28.65■■■□□ 2.18
SIL1-201ENST00000265195 ABCA10Q8WWZ4 1543 aa28.64■■■□□ 2.18
SIL1-201ENST00000265195 AQRO60306 1485 aaKnown RBP eCLIP28.62■■■□□ 2.171e-12■■■■■ 28.7
SIL1-201ENST00000265195 TDRD9Q8NDG6 1382 aaKnown RBP28.61■■■□□ 2.17
SIL1-201ENST00000265195 FAM9AQ8IZU1 332 aaPredicted RBP28.59■■■□□ 2.17
SIL1-201ENST00000265195 ABCA5Q8WWZ7 1642 aa28.52■■■□□ 2.16
SIL1-201ENST00000265195 RUSC2Q8N2Y8 1516 aa28.49■■■□□ 2.15
SIL1-201ENST00000265195 GAPVD1Q14C86 1478 aa28.47■■■□□ 2.15
SIL1-201ENST00000265195 PBRM1Q86U86 1689 aa28.41■■■□□ 2.14
SIL1-201ENST00000265195 GRIN2BQ13224 1484 aa28.41■■■□□ 2.14
SIL1-201ENST00000265195 EEA1Q15075 1411 aa28.4■■■□□ 2.14
SIL1-201ENST00000265195 LOC105371045A0A1W2PR82 267 aa28.38■■■□□ 2.13
SIL1-201ENST00000265195 SNAPC4Q5SXM2 1469 aa28.36■■■□□ 2.13
SIL1-201ENST00000265195 CSRNP3Q8WYN3 585 aa28.35■■■□□ 2.13
SIL1-201ENST00000265195 KIF27Q86VH2 1401 aa28.32■■■□□ 2.12
SIL1-201ENST00000265195 MAGI1Q96QZ7 1491 aaPredicted RBP28.3■■■□□ 2.12
SIL1-201ENST00000265195 ERICH3Q5RHP9 1530 aa28.28■■■□□ 2.12
SIL1-201ENST00000265195 CHD1O14646 1710 aa28.22■■■□□ 2.11
SIL1-201ENST00000265195 ADAMTS12P58397 1594 aa28.21■■■□□ 2.11
SIL1-201ENST00000265195 IGF1RP08069 1367 aa28.21■■■□□ 2.11
SIL1-201ENST00000265195 EHMT2Q96KQ7 1210 aa28.21■■■□□ 2.11
SIL1-201ENST00000265195 SYNJ2O15056 1496 aa28.19■■■□□ 2.1
SIL1-201ENST00000265195 FBLN2P98095 1184 aa28.16■■■□□ 2.1
SIL1-201ENST00000265195 FHAD1B1AJZ9 1412 aa28.14■■■□□ 2.1
SIL1-201ENST00000265195 CHMP7Q8WUX9 453 aaPredicted RBP28.12■■■□□ 2.09
SIL1-201ENST00000265195 CUL7Q14999 1698 aa28.09■■■□□ 2.09
SIL1-201ENST00000265195 OSCARQ8IYS5 282 aa28.08■■■□□ 2.09
SIL1-201ENST00000265195 GRIN2AQ12879 1464 aa28.07■■■□□ 2.08
SIL1-201ENST00000265195 PRXQ9BXM0 1461 aa28.04■■■□□ 2.08
SIL1-201ENST00000265195 CARMIL1Q5VZK9 1371 aa28.03■■■□□ 2.08
SIL1-201ENST00000265195 KIF21BO75037 1637 aa28.02■■■□□ 2.08
SIL1-201ENST00000265195 GOLGA3Q08378 1498 aa27.99■■■□□ 2.07
SIL1-201ENST00000265195 RAPGEF2Q9Y4G8 1499 aa27.99■■■□□ 2.07
SIL1-201ENST00000265195 DNAJC5Q9H3Z4 198 aa27.97■■■□□ 2.07
SIL1-201ENST00000265195 CEP170Q5SW79 1584 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms