RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 NISCHQ9Y2I1 1504 aa42.65■■■■■ 4.42
TNFSF13-205ENST00000396545 CCDC180Q9P1Z9 1646 aa38.28■■■■□ 3.72
TNFSF13-205ENST00000396545 ABCC9O60706 1549 aa38.21■■■■□ 3.71
TNFSF13-205ENST00000396545 RB1CC1Q8TDY2 1594 aa36.4■■■■□ 3.42
TNFSF13-205ENST00000396545 NACADO15069 1562 aa36.17■■■■□ 3.38
TNFSF13-205ENST00000396545 DCAF8L2P0C7V8 631 aa35.89■■■■□ 3.34
TNFSF13-205ENST00000396545 DNAJC5BQ9UF47 199 aa35.83■■■■□ 3.33
TNFSF13-205ENST00000396545 MYO15BQ96JP2 1530 aa35.72■■■■□ 3.31
TNFSF13-205ENST00000396545 UNC13AQ9UPW8 1703 aa35.58■■■■□ 3.29
TNFSF13-205ENST00000396545 PABPN1Q86U42 306 aaKnown RBP eCLIP35.56■■■■□ 3.28
TNFSF13-205ENST00000396545 ZCCHC6Q5VYS8 1495 aaKnown RBP35.37■■■■□ 3.25
TNFSF13-205ENST00000396545 BICRAQ9NZM4 1560 aa35.37■■■■□ 3.25
TNFSF13-205ENST00000396545 DCAF1Q9Y4B6 1507 aa35.26■■■■□ 3.24
TNFSF13-205ENST00000396545 SHROOM4Q9ULL8 1493 aa34.92■■■■□ 3.18
TNFSF13-205ENST00000396545 SCRIBQ14160 1630 aa34.85■■■■□ 3.17
TNFSF13-205ENST00000396545 CC2D2AQ9P2K1 1620 aa34.54■■■■□ 3.12
TNFSF13-205ENST00000396545 EIF4G1Q04637 1599 aaKnown RBP34.48■■■■□ 3.11
TNFSF13-205ENST00000396545 CECR2Q9BXF3 1484 aa34.44■■■■□ 3.1
TNFSF13-205ENST00000396545 NCAPD3P42695 1498 aa33.41■■■□□ 2.94
TNFSF13-205ENST00000396545 ATAD2BQ9ULI0 1458 aa33.29■■■□□ 2.92
TNFSF13-205ENST00000396545 SMARCA4P51532 1647 aa33.27■■■□□ 2.92
TNFSF13-205ENST00000396545 SMARCA2P51531 1590 aa33.21■■■□□ 2.91
TNFSF13-205ENST00000396545 HMGXB3Q12766 1538 aa33.16■■■□□ 2.9
TNFSF13-205ENST00000396545 BAZ1AQ9NRL2 1556 aaPredicted RBP33.11■■■□□ 2.89
TNFSF13-205ENST00000396545 ERCC6Q03468 1493 aa32.99■■■□□ 2.87
TNFSF13-205ENST00000396545 PEG3Q9GZU2 1588 aa32.98■■■□□ 2.87
TNFSF13-205ENST00000396545 BAZ1BQ9UIG0 1483 aaKnown RBP32.97■■■□□ 2.87
TNFSF13-205ENST00000396545 CUX2O14529 1486 aa32.96■■■□□ 2.87
TNFSF13-205ENST00000396545 DNAJC5Q9H3Z4 198 aa32.88■■■□□ 2.85
TNFSF13-205ENST00000396545 MROH2BQ7Z745 1585 aa32.86■■■□□ 2.85
TNFSF13-205ENST00000396545 NESP48681 1621 aa32.84■■■□□ 2.85
TNFSF13-205ENST00000396545 LAMC3Q9Y6N6 1575 aa32.64■■■□□ 2.81
TNFSF13-205ENST00000396545 THOC2Q8NI27 1593 aaKnown RBP32.54■■■□□ 2.8
TNFSF13-205ENST00000396545 WIZO95785 1651 aa32.44■■■□□ 2.78
TNFSF13-205ENST00000396545 PDS5BQ9NTI5 1447 aa32.43■■■□□ 2.78
TNFSF13-205ENST00000396545 KIF21AQ7Z4S6 1674 aa32.42■■■□□ 2.78
TNFSF13-205ENST00000396545 CADPSQ9ULU8 1353 aa32.37■■■□□ 2.77
TNFSF13-205ENST00000396545 RSF1Q96T23 1441 aaPredicted RBP32.2■■■□□ 2.74
TNFSF13-205ENST00000396545 MRC2Q9UBG0 1479 aa32.17■■■□□ 2.74
TNFSF13-205ENST00000396545 WDR62O43379 1518 aa32.11■■■□□ 2.73
TNFSF13-205ENST00000396545 TOP2AP11388 1531 aaKnown RBP32.07■■■□□ 2.72
TNFSF13-205ENST00000396545 CEP164Q9UPV0 1460 aa32.03■■■□□ 2.72
TNFSF13-205ENST00000396545 CFTRP13569 1480 aa32.03■■■□□ 2.72
TNFSF13-205ENST00000396545 FANCD2Q9BXW9 1451 aa32■■■□□ 2.71
TNFSF13-205ENST00000396545 URB2Q14146 1524 aaKnown RBP31.75■■■□□ 2.67
TNFSF13-205ENST00000396545 CCDC88BA6NC98 1476 aa31.69■■■□□ 2.66
TNFSF13-205ENST00000396545 PRDM2Q13029 1718 aa31.68■■■□□ 2.66
TNFSF13-205ENST00000396545 OSCARQ8IYS5 282 aa31.41■■■□□ 2.62
TNFSF13-205ENST00000396545 TOPBP1Q92547 1522 aa31.4■■■□□ 2.62
TNFSF13-205ENST00000396545 TRIM41Q8WV44 630 aa31.4■■■□□ 2.62
TNFSF13-205ENST00000396545 IFT140Q96RY7 1462 aa31.4■■■□□ 2.62
TNFSF13-205ENST00000396545 ZNF608Q9ULD9 1512 aaPredicted RBP31.34■■■□□ 2.61
TNFSF13-205ENST00000396545 ABCC8Q09428 1581 aa31.33■■■□□ 2.61
TNFSF13-205ENST00000396545 DNMBPQ6XZF7 1577 aa31.29■■■□□ 2.6
TNFSF13-205ENST00000396545 EIF4G3O43432 1585 aaKnown RBP31.18■■■□□ 2.58
TNFSF13-205ENST00000396545 TARBP1Q13395 1621 aaKnown RBP31.14■■■□□ 2.57
TNFSF13-205ENST00000396545 POLA1P09884 1462 aaPredicted RBP31.09■■■□□ 2.57
TNFSF13-205ENST00000396545 AQRO60306 1485 aaKnown RBP eCLIP31.06■■■□□ 2.56
TNFSF13-205ENST00000396545 RIMBP3CA6NJZ7 1639 aa31.03■■■□□ 2.56
TNFSF13-205ENST00000396545 RIMBP3BA6NNM3 1639 aa31.03■■■□□ 2.56
TNFSF13-205ENST00000396545 RIMBP3Q9UFD9 1639 aa31.03■■■□□ 2.56
TNFSF13-205ENST00000396545 RAD54L2Q9Y4B4 1467 aa30.96■■■□□ 2.55
TNFSF13-205ENST00000396545 ARHGEF11O15085 1522 aa30.94■■■□□ 2.54
TNFSF13-205ENST00000396545 CHD1O14646 1710 aa30.92■■■□□ 2.54
TNFSF13-205ENST00000396545 SOGA1O94964 1423 aa30.92■■■□□ 2.54
TNFSF13-205ENST00000396545 FGD5Q6ZNL6 1462 aa30.89■■■□□ 2.54
TNFSF13-205ENST00000396545 CUX1P39880 1505 aa30.88■■■□□ 2.53
TNFSF13-205ENST00000396545 TDRD9Q8NDG6 1382 aaKnown RBP30.85■■■□□ 2.53
TNFSF13-205ENST00000396545 WDR97A6NE52 1622 aa30.83■■■□□ 2.53
TNFSF13-205ENST00000396545 FBLN2P98095 1184 aa30.79■■■□□ 2.52
TNFSF13-205ENST00000396545 SNAPC4Q5SXM2 1469 aa30.75■■■□□ 2.51
TNFSF13-205ENST00000396545 SUPT5HO00267 1087 aaKnown RBP30.7■■■□□ 2.5
TNFSF13-205ENST00000396545 MAGI1Q96QZ7 1491 aaPredicted RBP30.68■■■□□ 2.5
TNFSF13-205ENST00000396545 GRIN2BQ13224 1484 aa30.67■■■□□ 2.5
TNFSF13-205ENST00000396545 CYB5RLQ6IPT4 315 aa30.66■■■□□ 2.5
TNFSF13-205ENST00000396545 ARAP1Q96P48 1450 aa30.65■■■□□ 2.5
TNFSF13-205ENST00000396545 CLASP1Q7Z460 1538 aa30.61■■■□□ 2.49
TNFSF13-205ENST00000396545 CHMP7Q8WUX9 453 aaPredicted RBP30.58■■■□□ 2.49
TNFSF13-205ENST00000396545 SYNJ2O15056 1496 aa30.57■■■□□ 2.48
TNFSF13-205ENST00000396545 GAPVD1Q14C86 1478 aa30.56■■■□□ 2.48
TNFSF13-205ENST00000396545 ABCA10Q8WWZ4 1543 aa30.56■■■□□ 2.48
TNFSF13-205ENST00000396545 SYNJ1O43426 1573 aa30.56■■■□□ 2.48
TNFSF13-205ENST00000396545 PBRM1Q86U86 1689 aa30.54■■■□□ 2.48
TNFSF13-205ENST00000396545 ABCA5Q8WWZ7 1642 aa30.51■■■□□ 2.48
TNFSF13-205ENST00000396545 WRNQ14191 1432 aaPredicted RBP eCLIP30.42■■■□□ 2.46
TNFSF13-205ENST00000396545 TOP2BQ02880 1626 aa30.39■■■□□ 2.45
TNFSF13-205ENST00000396545 BIVM-ERCC5R4GMW8 1640 aa30.39■■■□□ 2.45
TNFSF13-205ENST00000396545 GRIN2AQ12879 1464 aa30.29■■■□□ 2.44
TNFSF13-205ENST00000396545 TRHP20396 242 aaPredicted RBP30.28■■■□□ 2.44
TNFSF13-205ENST00000396545 ADAMTS12P58397 1594 aa30.28■■■□□ 2.44
TNFSF13-205ENST00000396545 NUP160Q12769 1436 aa30.2■■■□□ 2.42
TNFSF13-205ENST00000396545 FHAD1B1AJZ9 1412 aa30.18■■■□□ 2.42
TNFSF13-205ENST00000396545 ERICH3Q5RHP9 1530 aa30.17■■■□□ 2.42
TNFSF13-205ENST00000396545 CEP170Q5SW79 1584 aa30.17■■■□□ 2.42
TNFSF13-205ENST00000396545 ERCC6L2Q5T890 1561 aa30.11■■■□□ 2.41
TNFSF13-205ENST00000396545 SHROOM2Q13796 1616 aa30.06■■■□□ 2.4
TNFSF13-205ENST00000396545 PRG4Q92954 1404 aaPredicted RBP29.87■■■□□ 2.37
TNFSF13-205ENST00000396545 RUSC2Q8N2Y8 1516 aa29.85■■■□□ 2.37
TNFSF13-205ENST00000396545 JPH4Q96JJ6 628 aa29.83■■■□□ 2.37
TNFSF13-205ENST00000396545 KIF27Q86VH2 1401 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms