RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 NISCHQ9Y2I1 1504 aa43.75■■■■■ 4.59
CMTM1-213ENST00000529506 CCDC180Q9P1Z9 1646 aa39.13■■■■□ 3.85
CMTM1-213ENST00000529506 ABCC9O60706 1549 aa38.86■■■■□ 3.81
CMTM1-213ENST00000529506 RB1CC1Q8TDY2 1594 aa37.17■■■■□ 3.54
CMTM1-213ENST00000529506 NACADO15069 1562 aa37■■■■□ 3.51
CMTM1-213ENST00000529506 DCAF8L2P0C7V8 631 aa36.97■■■■□ 3.51
CMTM1-213ENST00000529506 MYO15BQ96JP2 1530 aa36.59■■■■□ 3.45
CMTM1-213ENST00000529506 PABPN1Q86U42 306 aaKnown RBP eCLIP36.27■■■■□ 3.4
CMTM1-213ENST00000529506 ZCCHC6Q5VYS8 1495 aaKnown RBP36.26■■■■□ 3.4
CMTM1-213ENST00000529506 DNAJC5BQ9UF47 199 aa36.22■■■■□ 3.39
CMTM1-213ENST00000529506 DCAF1Q9Y4B6 1507 aa36.2■■■■□ 3.39
CMTM1-213ENST00000529506 UNC13AQ9UPW8 1703 aa36.18■■■■□ 3.38
CMTM1-213ENST00000529506 BICRAQ9NZM4 1560 aa35.95■■■■□ 3.35
CMTM1-213ENST00000529506 SHROOM4Q9ULL8 1493 aa35.66■■■■□ 3.3
CMTM1-213ENST00000529506 SCRIBQ14160 1630 aa35.6■■■■□ 3.29
CMTM1-213ENST00000529506 CC2D2AQ9P2K1 1620 aa35.11■■■■□ 3.21
CMTM1-213ENST00000529506 EIF4G1Q04637 1599 aaKnown RBP35.1■■■■□ 3.21
CMTM1-213ENST00000529506 CECR2Q9BXF3 1484 aa35.03■■■■□ 3.2
CMTM1-213ENST00000529506 NCAPD3P42695 1498 aa34.16■■■■□ 3.06
CMTM1-213ENST00000529506 ATAD2BQ9ULI0 1458 aa34.05■■■■□ 3.04
CMTM1-213ENST00000529506 SMARCA4P51532 1647 aa34.03■■■■□ 3.04
CMTM1-213ENST00000529506 SMARCA2P51531 1590 aa34.01■■■■□ 3.03
CMTM1-213ENST00000529506 BAZ1AQ9NRL2 1556 aaPredicted RBP33.98■■■■□ 3.03
CMTM1-213ENST00000529506 HMGXB3Q12766 1538 aa33.87■■■■□ 3.01
CMTM1-213ENST00000529506 BAZ1BQ9UIG0 1483 aaKnown RBP33.75■■■□□ 2.99
CMTM1-213ENST00000529506 PEG3Q9GZU2 1588 aa33.72■■■□□ 2.99
CMTM1-213ENST00000529506 MROH2BQ7Z745 1585 aa33.65■■■□□ 2.98
CMTM1-213ENST00000529506 ERCC6Q03468 1493 aa33.62■■■□□ 2.97
CMTM1-213ENST00000529506 CUX2O14529 1486 aa33.46■■■□□ 2.95
CMTM1-213ENST00000529506 NESP48681 1621 aa33.41■■■□□ 2.94
CMTM1-213ENST00000529506 LAMC3Q9Y6N6 1575 aa33.32■■■□□ 2.92
CMTM1-213ENST00000529506 WIZO95785 1651 aa33.25■■■□□ 2.91
CMTM1-213ENST00000529506 DNAJC5Q9H3Z4 198 aa33.21■■■□□ 2.91
CMTM1-213ENST00000529506 PDS5BQ9NTI5 1447 aa33.2■■■□□ 2.91
CMTM1-213ENST00000529506 CADPSQ9ULU8 1353 aa33.16■■■□□ 2.9
CMTM1-213ENST00000529506 RSF1Q96T23 1441 aaPredicted RBP33.11■■■□□ 2.89
CMTM1-213ENST00000529506 THOC2Q8NI27 1593 aaKnown RBP32.99■■■□□ 2.87
CMTM1-213ENST00000529506 KIF21AQ7Z4S6 1674 aa32.97■■■□□ 2.87
CMTM1-213ENST00000529506 TOP2AP11388 1531 aaKnown RBP32.9■■■□□ 2.86
CMTM1-213ENST00000529506 MRC2Q9UBG0 1479 aa32.8■■■□□ 2.84
CMTM1-213ENST00000529506 CFTRP13569 1480 aa32.79■■■□□ 2.84
CMTM1-213ENST00000529506 CEP164Q9UPV0 1460 aa32.74■■■□□ 2.83
CMTM1-213ENST00000529506 FANCD2Q9BXW9 1451 aa32.72■■■□□ 2.83
CMTM1-213ENST00000529506 WDR62O43379 1518 aa32.67■■■□□ 2.82
CMTM1-213ENST00000529506 CCDC88BA6NC98 1476 aa32.55■■■□□ 2.8
CMTM1-213ENST00000529506 PRDM2Q13029 1718 aa32.41■■■□□ 2.78
CMTM1-213ENST00000529506 URB2Q14146 1524 aaKnown RBP32.36■■■□□ 2.77
CMTM1-213ENST00000529506 ABCC8Q09428 1581 aa32.21■■■□□ 2.75
CMTM1-213ENST00000529506 TOPBP1Q92547 1522 aa32.1■■■□□ 2.73
CMTM1-213ENST00000529506 IFT140Q96RY7 1462 aa32.1■■■□□ 2.73
CMTM1-213ENST00000529506 OSCARQ8IYS5 282 aa32.1■■■□□ 2.73
CMTM1-213ENST00000529506 DNMBPQ6XZF7 1577 aa32.01■■■□□ 2.71
CMTM1-213ENST00000529506 SUPT5HO00267 1087 aaKnown RBP31.94■■■□□ 2.7
CMTM1-213ENST00000529506 ZNF608Q9ULD9 1512 aaPredicted RBP31.91■■■□□ 2.7
CMTM1-213ENST00000529506 TRIM41Q8WV44 630 aa31.82■■■□□ 2.68
CMTM1-213ENST00000529506 POLA1P09884 1462 aaPredicted RBP31.78■■■□□ 2.68
CMTM1-213ENST00000529506 TARBP1Q13395 1621 aaKnown RBP31.76■■■□□ 2.67
CMTM1-213ENST00000529506 SOGA1O94964 1423 aa31.75■■■□□ 2.67
CMTM1-213ENST00000529506 EIF4G3O43432 1585 aaKnown RBP31.73■■■□□ 2.67
CMTM1-213ENST00000529506 AQRO60306 1485 aaKnown RBP eCLIP31.72■■■□□ 2.67
CMTM1-213ENST00000529506 RAD54L2Q9Y4B4 1467 aa31.65■■■□□ 2.66
CMTM1-213ENST00000529506 FGD5Q6ZNL6 1462 aa31.62■■■□□ 2.65
CMTM1-213ENST00000529506 TDRD9Q8NDG6 1382 aaKnown RBP31.6■■■□□ 2.65
CMTM1-213ENST00000529506 CUX1P39880 1505 aa31.59■■■□□ 2.65
CMTM1-213ENST00000529506 FBLN2P98095 1184 aa31.59■■■□□ 2.65
CMTM1-213ENST00000529506 WDR97A6NE52 1622 aa31.56■■■□□ 2.64
CMTM1-213ENST00000529506 CHD1O14646 1710 aa31.46■■■□□ 2.63
CMTM1-213ENST00000529506 RIMBP3CA6NJZ7 1639 aa31.44■■■□□ 2.62
CMTM1-213ENST00000529506 RIMBP3BA6NNM3 1639 aa31.44■■■□□ 2.62
CMTM1-213ENST00000529506 RIMBP3Q9UFD9 1639 aa31.44■■■□□ 2.62
CMTM1-213ENST00000529506 CHMP7Q8WUX9 453 aaPredicted RBP31.43■■■□□ 2.62
CMTM1-213ENST00000529506 GRIN2BQ13224 1484 aa31.41■■■□□ 2.62
CMTM1-213ENST00000529506 ARHGEF11O15085 1522 aa31.39■■■□□ 2.62
CMTM1-213ENST00000529506 SNAPC4Q5SXM2 1469 aa31.38■■■□□ 2.61
CMTM1-213ENST00000529506 MAGI1Q96QZ7 1491 aaPredicted RBP31.38■■■□□ 2.61
CMTM1-213ENST00000529506 GAPVD1Q14C86 1478 aa31.33■■■□□ 2.61
CMTM1-213ENST00000529506 ABCA10Q8WWZ4 1543 aa31.32■■■□□ 2.6
CMTM1-213ENST00000529506 WRNQ14191 1432 aaPredicted RBP eCLIP31.32■■■□□ 2.6
CMTM1-213ENST00000529506 CYB5RLQ6IPT4 315 aa31.28■■■□□ 2.6
CMTM1-213ENST00000529506 SYNJ2O15056 1496 aa31.26■■■□□ 2.59
CMTM1-213ENST00000529506 SYNJ1O43426 1573 aa31.22■■■□□ 2.59
CMTM1-213ENST00000529506 TOP2BQ02880 1626 aa31.21■■■□□ 2.59
CMTM1-213ENST00000529506 PBRM1Q86U86 1689 aa31.19■■■□□ 2.58
CMTM1-213ENST00000529506 BIVM-ERCC5R4GMW8 1640 aa31.18■■■□□ 2.58
CMTM1-213ENST00000529506 ABCA5Q8WWZ7 1642 aa31.16■■■□□ 2.58
CMTM1-213ENST00000529506 CLASP1Q7Z460 1538 aa31.12■■■□□ 2.57
CMTM1-213ENST00000529506 ARAP1Q96P48 1450 aa31.07■■■□□ 2.56
CMTM1-213ENST00000529506 FHAD1B1AJZ9 1412 aa30.97■■■□□ 2.55
CMTM1-213ENST00000529506 GRIN2AQ12879 1464 aa30.96■■■□□ 2.55
CMTM1-213ENST00000529506 ERICH3Q5RHP9 1530 aa30.95■■■□□ 2.55
CMTM1-213ENST00000529506 ADAMTS12P58397 1594 aa30.91■■■□□ 2.54
CMTM1-213ENST00000529506 TRHP20396 242 aaPredicted RBP30.88■■■□□ 2.53
CMTM1-213ENST00000529506 NUP160Q12769 1436 aa30.85■■■□□ 2.53
CMTM1-213ENST00000529506 CEP170Q5SW79 1584 aa30.76■■■□□ 2.52
CMTM1-213ENST00000529506 KIF27Q86VH2 1401 aa30.72■■■□□ 2.51
CMTM1-213ENST00000529506 JPH4Q96JJ6 628 aa30.67■■■□□ 2.5
CMTM1-213ENST00000529506 IGF1RP08069 1367 aa30.65■■■□□ 2.5
CMTM1-213ENST00000529506 SHROOM2Q13796 1616 aa30.64■■■□□ 2.5
CMTM1-213ENST00000529506 ERCC6L2Q5T890 1561 aa30.59■■■□□ 2.49
CMTM1-213ENST00000529506 PRG4Q92954 1404 aaPredicted RBP30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms