RNA–Protein interactions for RNA: ENST00000305850.9

CENPN-202, Transcript of centromere protein N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CENPN, Length 2,481 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPN-202ENST00000305850 NISCHQ9Y2I1 1504 aa34.54■■■■□ 3.12
CENPN-202ENST00000305850 SHROOM4Q9ULL8 1493 aa29.69■■■□□ 2.34
CENPN-202ENST00000305850 ZCCHC6Q5VYS8 1495 aaKnown RBP29.26■■■□□ 2.27
CENPN-202ENST00000305850 CCDC180Q9P1Z9 1646 aa29.22■■■□□ 2.27
CENPN-202ENST00000305850 SUPT5HO00267 1087 aaKnown RBP29.18■■■□□ 2.26
CENPN-202ENST00000305850 DCAF8L2P0C7V8 631 aa28.63■■■□□ 2.17
CENPN-202ENST00000305850 MYO15BQ96JP2 1530 aa28.47■■■□□ 2.15
CENPN-202ENST00000305850 CHIC1Q5VXU3 224 aa28.44■■■□□ 2.14
CENPN-202ENST00000305850 DCAF1Q9Y4B6 1507 aa28.27■■■□□ 2.12
CENPN-202ENST00000305850 HRCP23327 699 aa27.91■■■□□ 2.06
CENPN-202ENST00000305850 PCGF6Q9BYE7 350 aa27.8■■■□□ 2.04
CENPN-202ENST00000305850 ABCC9O60706 1549 aa27.66■■■□□ 2.02
CENPN-202ENST00000305850 LOC105371045A0A1W2PR82 267 aa27.66■■■□□ 2.02
CENPN-202ENST00000305850 SCRIBQ14160 1630 aa27.53■■■□□ 2
CENPN-202ENST00000305850 RSF1Q96T23 1441 aaPredicted RBP27.43■■□□□ 1.98
CENPN-202ENST00000305850 PPARGC1BQ86YN6 1023 aaKnown RBP27.39■■□□□ 1.97
CENPN-202ENST00000305850 RB1CC1Q8TDY2 1594 aa27.22■■□□□ 1.95
CENPN-202ENST00000305850 TRIM26Q12899 539 aaPredicted RBP27.15■■□□□ 1.94
CENPN-202ENST00000305850 TRIM41Q8WV44 630 aa27.11■■□□□ 1.93
CENPN-202ENST00000305850 CECR2Q9BXF3 1484 aa26.99■■□□□ 1.91
CENPN-202ENST00000305850 FAM9AQ8IZU1 332 aaPredicted RBP26.97■■□□□ 1.91
CENPN-202ENST00000305850 NACADO15069 1562 aa26.97■■□□□ 1.91
CENPN-202ENST00000305850 MROH2BQ7Z745 1585 aa26.91■■□□□ 1.9
CENPN-202ENST00000305850 WIZO95785 1651 aa26.8■■□□□ 1.88
CENPN-202ENST00000305850 EHMT2Q96KQ7 1210 aa26.79■■□□□ 1.88
CENPN-202ENST00000305850 BAZ1AQ9NRL2 1556 aaPredicted RBP26.59■■□□□ 1.85
CENPN-202ENST00000305850 ZEB1P37275 1124 aaPredicted RBP26.58■■□□□ 1.85
CENPN-202ENST00000305850 EIF4G1Q04637 1599 aaKnown RBP26.51■■□□□ 1.83
CENPN-202ENST00000305850 TOP2AP11388 1531 aaKnown RBP26.31■■□□□ 1.8
CENPN-202ENST00000305850 ABCC8Q09428 1581 aa26.29■■□□□ 1.8
CENPN-202ENST00000305850 SMARCA4P51532 1647 aa26.28■■□□□ 1.8
CENPN-202ENST00000305850 CCDC88BA6NC98 1476 aa26.24■■□□□ 1.79
CENPN-202ENST00000305850 UNC13AQ9UPW8 1703 aa26.22■■□□□ 1.79
CENPN-202ENST00000305850 SMARCA2P51531 1590 aa26.2■■□□□ 1.79
CENPN-202ENST00000305850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.11■■□□□ 1.77
CENPN-202ENST00000305850 SOGA1O94964 1423 aa26.06■■□□□ 1.76
CENPN-202ENST00000305850 CEP162Q5TB80 1403 aa26.01■■□□□ 1.75
CENPN-202ENST00000305850 CCER1Q8TC90 406 aaPredicted RBP25.99■■□□□ 1.75
CENPN-202ENST00000305850 WRNQ14191 1432 aaPredicted RBP eCLIP25.99■■□□□ 1.75
CENPN-202ENST00000305850 TTBK1Q5TCY1 1321 aaPredicted RBP25.98■■□□□ 1.75
CENPN-202ENST00000305850 RUSC2Q8N2Y8 1516 aa25.95■■□□□ 1.74
CENPN-202ENST00000305850 TNIKQ9UKE5 1360 aa25.9■■□□□ 1.74
CENPN-202ENST00000305850 SCAF1Q9H7N4 1312 aaKnown RBP25.88■■□□□ 1.73
CENPN-202ENST00000305850 PABPN1Q86U42 306 aaKnown RBP eCLIP25.88■■□□□ 1.73
CENPN-202ENST00000305850 CSRNP3Q8WYN3 585 aa25.87■■□□□ 1.73
CENPN-202ENST00000305850 BICRAQ9NZM4 1560 aa25.85■■□□□ 1.73
CENPN-202ENST00000305850 EEA1Q15075 1411 aa25.83■■□□□ 1.73
CENPN-202ENST00000305850 UBTFP17480 764 aaKnown RBP25.8■■□□□ 1.72
CENPN-202ENST00000305850 GOLGA3Q08378 1498 aa25.73■■□□□ 1.71
CENPN-202ENST00000305850 PEG3Q9GZU2 1588 aa25.72■■□□□ 1.71
CENPN-202ENST00000305850 SYNJ1O43426 1573 aa25.66■■□□□ 1.7
CENPN-202ENST00000305850 DIEXFQ68CQ4 756 aaKnown RBP25.6■■□□□ 1.69
CENPN-202ENST00000305850 CEP164Q9UPV0 1460 aa25.56■■□□□ 1.68
CENPN-202ENST00000305850 ATAD2BQ9ULI0 1458 aa25.54■■□□□ 1.68
CENPN-202ENST00000305850 KIF21BO75037 1637 aa25.54■■□□□ 1.68
CENPN-202ENST00000305850 ACIN1Q9UKV3 1341 aaKnown RBP25.52■■□□□ 1.68
CENPN-202ENST00000305850 NEUROD1Q13562 356 aa25.52■■□□□ 1.68
CENPN-202ENST00000305850 BAZ1BQ9UIG0 1483 aaKnown RBP25.48■■□□□ 1.67
CENPN-202ENST00000305850 CLIP1P30622 1438 aa25.46■■□□□ 1.67
CENPN-202ENST00000305850 RAPGEF2Q9Y4G8 1499 aa25.4■■□□□ 1.66
CENPN-202ENST00000305850 HNRNPUL2Q1KMD3 747 aaKnown RBP25.39■■□□□ 1.66
CENPN-202ENST00000305850 PELP1Q8IZL8 1130 aaKnown RBP25.39■■□□□ 1.65
CENPN-202ENST00000305850 VPS8Q8N3P4 1428 aa25.37■■□□□ 1.65
CENPN-202ENST00000305850 ZNF316A6NFI3 1004 aaPredicted RBP25.35■■□□□ 1.65
CENPN-202ENST00000305850 RANGAP1P46060 587 aaPredicted RBP25.31■■□□□ 1.64
CENPN-202ENST00000305850 TOP2BQ02880 1626 aa25.29■■□□□ 1.64
CENPN-202ENST00000305850 CENPBP07199 599 aaPredicted RBP25.28■■□□□ 1.64
CENPN-202ENST00000305850 GTF3C3Q9Y5Q9 886 aa25.26■■□□□ 1.63
CENPN-202ENST00000305850 APLP2Q06481 763 aa25.21■■□□□ 1.63
CENPN-202ENST00000305850 BIVM-ERCC5R4GMW8 1640 aa25.19■■□□□ 1.62
CENPN-202ENST00000305850 PRXQ9BXM0 1461 aa25.09■■□□□ 1.61
CENPN-202ENST00000305850 ERICH3Q5RHP9 1530 aa25.08■■□□□ 1.6
CENPN-202ENST00000305850 YTHDC1Q96MU7 727 aaKnown RBP25.06■■□□□ 1.6
CENPN-202ENST00000305850 ARAP1Q96P48 1450 aa25.06■■□□□ 1.6
CENPN-202ENST00000305850 MIER1Q8N108 512 aa25.06■■□□□ 1.6
CENPN-202ENST00000305850 CUX1P39880 1505 aa25.03■■□□□ 1.6
CENPN-202ENST00000305850 HMGXB3Q12766 1538 aa24.98■■□□□ 1.59
CENPN-202ENST00000305850 KANK4Q5T7N3 995 aaPredicted RBP24.98■■□□□ 1.59
CENPN-202ENST00000305850 NCAPD3P42695 1498 aa24.97■■□□□ 1.59
CENPN-202ENST00000305850 DHX57Q6P158 1386 aaKnown RBP24.91■■□□□ 1.58
CENPN-202ENST00000305850 KIF27Q86VH2 1401 aa24.9■■□□□ 1.58
CENPN-202ENST00000305850 CFTRP13569 1480 aa24.86■■□□□ 1.57
CENPN-202ENST00000305850 CLSPNQ9HAW4 1339 aa24.82■■□□□ 1.56
CENPN-202ENST00000305850 RRBP1Q9P2E9 1410 aaKnown RBP24.81■■□□□ 1.56
CENPN-202ENST00000305850 ARHGAP35Q9NRY4 1499 aa24.81■■□□□ 1.56
CENPN-202ENST00000305850 CCNB3Q8WWL7 1395 aa24.7■■□□□ 1.54
CENPN-202ENST00000305850 CUX2O14529 1486 aa24.68■■□□□ 1.54
CENPN-202ENST00000305850 PRDM2Q13029 1718 aa24.67■■□□□ 1.54
CENPN-202ENST00000305850 ITGAEP38570 1179 aa24.66■■□□□ 1.54
CENPN-202ENST00000305850 IGF1RP08069 1367 aa24.65■■□□□ 1.54
CENPN-202ENST00000305850 TIAM1Q13009 1591 aa24.56■■□□□ 1.52
CENPN-202ENST00000305850 FGD5Q6ZNL6 1462 aa24.54■■□□□ 1.52
CENPN-202ENST00000305850 CARMIL1Q5VZK9 1371 aa24.53■■□□□ 1.52
CENPN-202ENST00000305850 CADPSQ9ULU8 1353 aa24.53■■□□□ 1.52
CENPN-202ENST00000305850 RAB3GAP2Q9H2M9 1393 aa24.52■■□□□ 1.52
CENPN-202ENST00000305850 MAPKBP1O60336 1514 aa24.49■■□□□ 1.51
CENPN-202ENST00000305850 MAP3K1Q13233 1512 aa24.48■■□□□ 1.51
CENPN-202ENST00000305850 LRRC9Q6ZRR7 1453 aa24.46■■□□□ 1.51
CENPN-202ENST00000305850 PHLDB1Q86UU1 1377 aa24.45■■□□□ 1.5
CENPN-202ENST00000305850 P3H3Q8IVL6 736 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms