RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

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Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 NISCHQ9Y2I1 1504 aa34.41■■■■□ 3.1
LONRF3-201ENST00000304778 CCDC180Q9P1Z9 1646 aa29.6■■■□□ 2.33
LONRF3-201ENST00000304778 ZCCHC6Q5VYS8 1495 aaKnown RBP29■■■□□ 2.23
LONRF3-201ENST00000304778 SHROOM4Q9ULL8 1493 aa28.74■■■□□ 2.19
LONRF3-201ENST00000304778 DCAF8L2P0C7V8 631 aa28.53■■■□□ 2.16
LONRF3-201ENST00000304778 DCAF1Q9Y4B6 1507 aa28.32■■■□□ 2.12
LONRF3-201ENST00000304778 SUPT5HO00267 1087 aaKnown RBP27.91■■■□□ 2.06
LONRF3-201ENST00000304778 ABCC9O60706 1549 aa27.78■■■□□ 2.04
LONRF3-201ENST00000304778 MYO15BQ96JP2 1530 aa27.74■■■□□ 2.03
LONRF3-201ENST00000304778 SCRIBQ14160 1630 aa27.52■■■□□ 2
LONRF3-201ENST00000304778 NACADO15069 1562 aa27.49■■□□□ 1.99
LONRF3-201ENST00000304778 RB1CC1Q8TDY2 1594 aa27.15■■□□□ 1.94
LONRF3-201ENST00000304778 RSF1Q96T23 1441 aaPredicted RBP26.97■■□□□ 1.91
LONRF3-201ENST00000304778 CHIC1Q5VXU3 224 aa26.94■■□□□ 1.9
LONRF3-201ENST00000304778 CECR2Q9BXF3 1484 aa26.82■■□□□ 1.88
LONRF3-201ENST00000304778 UNC13AQ9UPW8 1703 aa26.69■■□□□ 1.86
LONRF3-201ENST00000304778 MROH2BQ7Z745 1585 aa26.68■■□□□ 1.86
LONRF3-201ENST00000304778 HRCP23327 699 aa26.61■■□□□ 1.85
LONRF3-201ENST00000304778 WIZO95785 1651 aa26.5■■□□□ 1.83
LONRF3-201ENST00000304778 BAZ1AQ9NRL2 1556 aaPredicted RBP26.49■■□□□ 1.83
LONRF3-201ENST00000304778 PPARGC1BQ86YN6 1023 aaKnown RBP26.43■■□□□ 1.82
LONRF3-201ENST00000304778 PCGF6Q9BYE7 350 aa26.43■■□□□ 1.82
LONRF3-201ENST00000304778 PABPN1Q86U42 306 aaKnown RBP eCLIP26.41■■□□□ 1.82
LONRF3-201ENST00000304778 BICRAQ9NZM4 1560 aa26.41■■□□□ 1.82
LONRF3-201ENST00000304778 SMARCA4P51532 1647 aa26.33■■□□□ 1.81
LONRF3-201ENST00000304778 TOP2AP11388 1531 aaKnown RBP26.14■■□□□ 1.77
LONRF3-201ENST00000304778 TRIM41Q8WV44 630 aa26.11■■□□□ 1.77
LONRF3-201ENST00000304778 LOC105371045A0A1W2PR82 267 aa26.06■■□□□ 1.76
LONRF3-201ENST00000304778 PELP1Q8IZL8 1130 aaKnown RBP25.99■■□□□ 1.75
LONRF3-201ENST00000304778 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
LONRF3-201ENST00000304778 SMARCA2P51531 1590 aa25.95■■□□□ 1.75
LONRF3-201ENST00000304778 EIF4G1Q04637 1599 aaKnown RBP25.93■■□□□ 1.74
LONRF3-201ENST00000304778 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
LONRF3-201ENST00000304778 ATAD2BQ9ULI0 1458 aa25.79■■□□□ 1.72
LONRF3-201ENST00000304778 FAM9AQ8IZU1 332 aaPredicted RBP25.78■■□□□ 1.72
LONRF3-201ENST00000304778 TRIM26Q12899 539 aaPredicted RBP25.71■■□□□ 1.71
LONRF3-201ENST00000304778 BAZ1BQ9UIG0 1483 aaKnown RBP25.68■■□□□ 1.7
LONRF3-201ENST00000304778 ABCC8Q09428 1581 aa25.66■■□□□ 1.7
LONRF3-201ENST00000304778 EHMT2Q96KQ7 1210 aa25.51■■□□□ 1.67
LONRF3-201ENST00000304778 NCAPD3P42695 1498 aa25.42■■□□□ 1.66
LONRF3-201ENST00000304778 HMGXB3Q12766 1538 aa25.39■■□□□ 1.65
LONRF3-201ENST00000304778 WRNQ14191 1432 aaPredicted RBP eCLIP25.35■■□□□ 1.65
LONRF3-201ENST00000304778 SCAF1Q9H7N4 1312 aaKnown RBP25.33■■□□□ 1.65
LONRF3-201ENST00000304778 SOGA1O94964 1423 aa25.31■■□□□ 1.64
LONRF3-201ENST00000304778 SYNJ1O43426 1573 aa25.25■■□□□ 1.63
LONRF3-201ENST00000304778 ZEB1P37275 1124 aaPredicted RBP25.23■■□□□ 1.63
LONRF3-201ENST00000304778 RUSC2Q8N2Y8 1516 aa25.21■■□□□ 1.63
LONRF3-201ENST00000304778 EEA1Q15075 1411 aa25.17■■□□□ 1.62
LONRF3-201ENST00000304778 CSRNP3Q8WYN3 585 aa25.14■■□□□ 1.62
LONRF3-201ENST00000304778 CC2D2AQ9P2K1 1620 aa25.07■■□□□ 1.6
LONRF3-201ENST00000304778 CFTRP13569 1480 aa25.04■■□□□ 1.6
LONRF3-201ENST00000304778 TOP2BQ02880 1626 aa25.02■■□□□ 1.6
LONRF3-201ENST00000304778 MYT1Q01538 1121 aa25.02■■□□□ 1.6
LONRF3-201ENST00000304778 TNIKQ9UKE5 1360 aa24.97■■□□□ 1.59
LONRF3-201ENST00000304778 BIVM-ERCC5R4GMW8 1640 aa24.96■■□□□ 1.59
LONRF3-201ENST00000304778 UBTFP17480 764 aaKnown RBP24.94■■□□□ 1.58
LONRF3-201ENST00000304778 GOLGA3Q08378 1498 aa24.93■■□□□ 1.58
LONRF3-201ENST00000304778 CEP162Q5TB80 1403 aa24.93■■□□□ 1.58
LONRF3-201ENST00000304778 CUX1P39880 1505 aa24.9■■□□□ 1.58
LONRF3-201ENST00000304778 CADPSQ9ULU8 1353 aa24.87■■□□□ 1.57
LONRF3-201ENST00000304778 CEP164Q9UPV0 1460 aa24.86■■□□□ 1.57
LONRF3-201ENST00000304778 KIF21BO75037 1637 aa24.85■■□□□ 1.57
LONRF3-201ENST00000304778 PRDM2Q13029 1718 aa24.83■■□□□ 1.57
LONRF3-201ENST00000304778 RAPGEF2Q9Y4G8 1499 aa24.73■■□□□ 1.55
LONRF3-201ENST00000304778 DNAJC5BQ9UF47 199 aa24.66■■□□□ 1.54
LONRF3-201ENST00000304778 KIF27Q86VH2 1401 aa24.64■■□□□ 1.53
LONRF3-201ENST00000304778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.63■■□□□ 1.53
LONRF3-201ENST00000304778 ACIN1Q9UKV3 1341 aaKnown RBP24.62■■□□□ 1.53
LONRF3-201ENST00000304778 PRXQ9BXM0 1461 aa24.61■■□□□ 1.53
LONRF3-201ENST00000304778 FANCD2Q9BXW9 1451 aa24.61■■□□□ 1.53
LONRF3-201ENST00000304778 CLIP1P30622 1438 aa24.6■■□□□ 1.53
LONRF3-201ENST00000304778 NESP48681 1621 aa24.58■■□□□ 1.53
LONRF3-201ENST00000304778 NEUROD1Q13562 356 aa24.57■■□□□ 1.52
LONRF3-201ENST00000304778 ERICH3Q5RHP9 1530 aa24.56■■□□□ 1.52
LONRF3-201ENST00000304778 CCER1Q8TC90 406 aaPredicted RBP24.56■■□□□ 1.52
LONRF3-201ENST00000304778 TTBK1Q5TCY1 1321 aaPredicted RBP24.54■■□□□ 1.52
LONRF3-201ENST00000304778 FGD5Q6ZNL6 1462 aa24.54■■□□□ 1.52
LONRF3-201ENST00000304778 RANGAP1P46060 587 aaPredicted RBP24.52■■□□□ 1.52
LONRF3-201ENST00000304778 CUX2O14529 1486 aa24.5■■□□□ 1.51
LONRF3-201ENST00000304778 GTF3C3Q9Y5Q9 886 aa24.46■■□□□ 1.51
LONRF3-201ENST00000304778 LAMC3Q9Y6N6 1575 aa24.44■■□□□ 1.5
LONRF3-201ENST00000304778 VPS8Q8N3P4 1428 aa24.43■■□□□ 1.5
LONRF3-201ENST00000304778 DNMBPQ6XZF7 1577 aa24.42■■□□□ 1.5
LONRF3-201ENST00000304778 IGF1RP08069 1367 aa24.42■■□□□ 1.5
LONRF3-201ENST00000304778 TOPBP1Q92547 1522 aa24.39■■□□□ 1.5
LONRF3-201ENST00000304778 RAD54L2Q9Y4B4 1467 aa24.34■■□□□ 1.49
LONRF3-201ENST00000304778 POLA1P09884 1462 aaPredicted RBP24.33■■□□□ 1.49
LONRF3-201ENST00000304778 CARMIL1Q5VZK9 1371 aa24.3■■□□□ 1.48
LONRF3-201ENST00000304778 ARAP1Q96P48 1450 aa24.29■■□□□ 1.48
LONRF3-201ENST00000304778 URB2Q14146 1524 aaKnown RBP24.29■■□□□ 1.48
LONRF3-201ENST00000304778 PDS5BQ9NTI5 1447 aa24.28■■□□□ 1.48
LONRF3-201ENST00000304778 ABCA10Q8WWZ4 1543 aa24.27■■□□□ 1.48
LONRF3-201ENST00000304778 DIEXFQ68CQ4 756 aaKnown RBP24.27■■□□□ 1.48
LONRF3-201ENST00000304778 CENPBP07199 599 aaPredicted RBP24.26■■□□□ 1.47
LONRF3-201ENST00000304778 APLP2Q06481 763 aa24.26■■□□□ 1.47
LONRF3-201ENST00000304778 KIF21AQ7Z4S6 1674 aa24.19■■□□□ 1.46
LONRF3-201ENST00000304778 ARHGAP35Q9NRY4 1499 aa24.18■■□□□ 1.46
LONRF3-201ENST00000304778 WDR97A6NE52 1622 aa24.11■■□□□ 1.45
LONRF3-201ENST00000304778 YTHDC1Q96MU7 727 aaKnown RBP24.1■■□□□ 1.45
LONRF3-201ENST00000304778 TDRD9Q8NDG6 1382 aaKnown RBP24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms