RNA–Protein interactions for RNA: ENST00000469217.5

PCCB-209, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PCCB, Length 1,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-209ENST00000469217 NISCHQ9Y2I1 1504 aa40.99■■■■■ 4.15
PCCB-209ENST00000469217 CCDC180Q9P1Z9 1646 aa36.09■■■■□ 3.37
PCCB-209ENST00000469217 ABCC9O60706 1549 aa34.75■■■■□ 3.15
PCCB-209ENST00000469217 ZCCHC6Q5VYS8 1495 aaKnown RBP34.28■■■■□ 3.08
PCCB-209ENST00000469217 DCAF8L2P0C7V8 631 aa34.06■■■■□ 3.04
PCCB-209ENST00000469217 DCAF1Q9Y4B6 1507 aa33.9■■■■□ 3.02
PCCB-209ENST00000469217 MYO15BQ96JP2 1530 aa33.78■■■■□ 3
PCCB-209ENST00000469217 NACADO15069 1562 aa33.78■■■■□ 3
PCCB-209ENST00000469217 RB1CC1Q8TDY2 1594 aa33.66■■■□□ 2.98
PCCB-209ENST00000469217 SCRIBQ14160 1630 aa33.05■■■□□ 2.88
PCCB-209ENST00000469217 UNC13AQ9UPW8 1703 aa32.94■■■□□ 2.86
PCCB-209ENST00000469217 SHROOM4Q9ULL8 1493 aa32.88■■■□□ 2.85
PCCB-209ENST00000469217 BICRAQ9NZM4 1560 aa32.66■■■□□ 2.82
PCCB-209ENST00000469217 PABPN1Q86U42 306 aaKnown RBP eCLIP32.62■■■□□ 2.81
PCCB-209ENST00000469217 CECR2Q9BXF3 1484 aa31.9■■■□□ 2.7
PCCB-209ENST00000469217 EIF4G1Q04637 1599 aaKnown RBP31.73■■■□□ 2.67
PCCB-209ENST00000469217 BAZ1AQ9NRL2 1556 aaPredicted RBP31.71■■■□□ 2.67
PCCB-209ENST00000469217 SMARCA4P51532 1647 aa31.66■■■□□ 2.66
PCCB-209ENST00000469217 MROH2BQ7Z745 1585 aa31.63■■■□□ 2.65
PCCB-209ENST00000469217 RSF1Q96T23 1441 aaPredicted RBP31.51■■■□□ 2.63
PCCB-209ENST00000469217 CC2D2AQ9P2K1 1620 aa31.44■■■□□ 2.62
PCCB-209ENST00000469217 WIZO95785 1651 aa31.33■■■□□ 2.61
PCCB-209ENST00000469217 ATAD2BQ9ULI0 1458 aa31.32■■■□□ 2.61
PCCB-209ENST00000469217 DNAJC5BQ9UF47 199 aa31.32■■■□□ 2.6
PCCB-209ENST00000469217 PEG3Q9GZU2 1588 aa31.31■■■□□ 2.6
PCCB-209ENST00000469217 SUPT5HO00267 1087 aaKnown RBP31.28■■■□□ 2.6
PCCB-209ENST00000469217 SMARCA2P51531 1590 aa31.28■■■□□ 2.6
PCCB-209ENST00000469217 NCAPD3P42695 1498 aa31.19■■■□□ 2.58
PCCB-209ENST00000469217 BAZ1BQ9UIG0 1483 aaKnown RBP31.09■■■□□ 2.57
PCCB-209ENST00000469217 HMGXB3Q12766 1538 aa31.07■■■□□ 2.57
PCCB-209ENST00000469217 TOP2AP11388 1531 aaKnown RBP30.99■■■□□ 2.55
PCCB-209ENST00000469217 CCDC88BA6NC98 1476 aa30.67■■■□□ 2.5
PCCB-209ENST00000469217 CADPSQ9ULU8 1353 aa30.33■■■□□ 2.45
PCCB-209ENST00000469217 CFTRP13569 1480 aa30.29■■■□□ 2.44
PCCB-209ENST00000469217 NESP48681 1621 aa30.29■■■□□ 2.44
PCCB-209ENST00000469217 LAMC3Q9Y6N6 1575 aa30.24■■■□□ 2.43
PCCB-209ENST00000469217 PRDM2Q13029 1718 aa30.07■■■□□ 2.4
PCCB-209ENST00000469217 PDS5BQ9NTI5 1447 aa30.02■■■□□ 2.4
PCCB-209ENST00000469217 FANCD2Q9BXW9 1451 aa29.98■■■□□ 2.39
PCCB-209ENST00000469217 KIF21AQ7Z4S6 1674 aa29.91■■■□□ 2.38
PCCB-209ENST00000469217 ERCC6Q03468 1493 aa29.87■■■□□ 2.37
PCCB-209ENST00000469217 CEP164Q9UPV0 1460 aa29.87■■■□□ 2.37
PCCB-209ENST00000469217 ABCC8Q09428 1581 aa29.78■■■□□ 2.36
PCCB-209ENST00000469217 WRNQ14191 1432 aaPredicted RBP eCLIP29.69■■■□□ 2.34
PCCB-209ENST00000469217 MRC2Q9UBG0 1479 aa29.68■■■□□ 2.34
PCCB-209ENST00000469217 URB2Q14146 1524 aaKnown RBP29.65■■■□□ 2.34
PCCB-209ENST00000469217 THOC2Q8NI27 1593 aaKnown RBP29.63■■■□□ 2.33
PCCB-209ENST00000469217 CUX1P39880 1505 aa29.62■■■□□ 2.33
PCCB-209ENST00000469217 SYNJ1O43426 1573 aa29.58■■■□□ 2.33
PCCB-209ENST00000469217 TOPBP1Q92547 1522 aa29.58■■■□□ 2.33
PCCB-209ENST00000469217 DNMBPQ6XZF7 1577 aa29.58■■■□□ 2.33
PCCB-209ENST00000469217 CHIC1Q5VXU3 224 aa29.57■■■□□ 2.32
PCCB-209ENST00000469217 WDR62O43379 1518 aa29.56■■■□□ 2.32
PCCB-209ENST00000469217 TOP2BQ02880 1626 aa29.53■■■□□ 2.32
PCCB-209ENST00000469217 BIVM-ERCC5R4GMW8 1640 aa29.51■■■□□ 2.31
PCCB-209ENST00000469217 TRIM41Q8WV44 630 aa29.48■■■□□ 2.31
PCCB-209ENST00000469217 FGD5Q6ZNL6 1462 aa29.42■■■□□ 2.3
PCCB-209ENST00000469217 POLA1P09884 1462 aaPredicted RBP29.39■■■□□ 2.29
PCCB-209ENST00000469217 CUX2O14529 1486 aa29.31■■■□□ 2.28
PCCB-209ENST00000469217 SOGA1O94964 1423 aa29.28■■■□□ 2.28
PCCB-209ENST00000469217 RAD54L2Q9Y4B4 1467 aa29.27■■■□□ 2.28
PCCB-209ENST00000469217 TARBP1Q13395 1621 aaKnown RBP29.2■■■□□ 2.27
PCCB-209ENST00000469217 IFT140Q96RY7 1462 aa29.2■■■□□ 2.26
PCCB-209ENST00000469217 ABCA10Q8WWZ4 1543 aa29.14■■■□□ 2.26
PCCB-209ENST00000469217 WDR97A6NE52 1622 aa29.11■■■□□ 2.25
PCCB-209ENST00000469217 ZNF608Q9ULD9 1512 aaPredicted RBP29.06■■■□□ 2.24
PCCB-209ENST00000469217 TDRD9Q8NDG6 1382 aaKnown RBP29.05■■■□□ 2.24
PCCB-209ENST00000469217 RUSC2Q8N2Y8 1516 aa29.01■■■□□ 2.23
PCCB-209ENST00000469217 AQRO60306 1485 aaKnown RBP eCLIP28.99■■■□□ 2.232e-6■■■■□ 22.2
PCCB-209ENST00000469217 KIF27Q86VH2 1401 aa28.99■■■□□ 2.23
PCCB-209ENST00000469217 ABCA5Q8WWZ7 1642 aa28.96■■■□□ 2.23
PCCB-209ENST00000469217 EIF4G3O43432 1585 aaKnown RBP28.95■■■□□ 2.23
PCCB-209ENST00000469217 GAPVD1Q14C86 1478 aa28.95■■■□□ 2.22
PCCB-209ENST00000469217 FAM9AQ8IZU1 332 aaPredicted RBP28.9■■■□□ 2.22
PCCB-209ENST00000469217 EEA1Q15075 1411 aa28.87■■■□□ 2.21
PCCB-209ENST00000469217 GRIN2BQ13224 1484 aa28.83■■■□□ 2.21
PCCB-209ENST00000469217 IGF1RP08069 1367 aa28.82■■■□□ 2.2
PCCB-209ENST00000469217 PBRM1Q86U86 1689 aa28.82■■■□□ 2.2
PCCB-209ENST00000469217 ERICH3Q5RHP9 1530 aa28.79■■■□□ 2.2
PCCB-209ENST00000469217 CSRNP3Q8WYN3 585 aa28.78■■■□□ 2.2
PCCB-209ENST00000469217 SNAPC4Q5SXM2 1469 aa28.72■■■□□ 2.19
PCCB-209ENST00000469217 MAGI1Q96QZ7 1491 aaPredicted RBP28.67■■■□□ 2.18
PCCB-209ENST00000469217 CARMIL1Q5VZK9 1371 aa28.65■■■□□ 2.18
PCCB-209ENST00000469217 CUL7Q14999 1698 aa28.65■■■□□ 2.18
PCCB-209ENST00000469217 ADAMTS12P58397 1594 aa28.63■■■□□ 2.17
PCCB-209ENST00000469217 PRXQ9BXM0 1461 aa28.62■■■□□ 2.17
PCCB-209ENST00000469217 FHAD1B1AJZ9 1412 aa28.62■■■□□ 2.17
PCCB-209ENST00000469217 SYNJ2O15056 1496 aa28.56■■■□□ 2.16
PCCB-209ENST00000469217 RAPGEF2Q9Y4G8 1499 aa28.55■■■□□ 2.16
PCCB-209ENST00000469217 FBLN2P98095 1184 aa28.53■■■□□ 2.16
PCCB-209ENST00000469217 KIF21BO75037 1637 aa28.53■■■□□ 2.16
PCCB-209ENST00000469217 CHMP7Q8WUX9 453 aaPredicted RBP28.53■■■□□ 2.16
PCCB-209ENST00000469217 EHMT2Q96KQ7 1210 aa28.51■■■□□ 2.15
PCCB-209ENST00000469217 GRIN2AQ12879 1464 aa28.47■■■□□ 2.15
PCCB-209ENST00000469217 CHD1O14646 1710 aa28.45■■■□□ 2.15
PCCB-209ENST00000469217 GOLGA3Q08378 1498 aa28.43■■■□□ 2.14
PCCB-209ENST00000469217 LOC105371045A0A1W2PR82 267 aa28.41■■■□□ 2.14
PCCB-209ENST00000469217 UBTFP17480 764 aaKnown RBP28.34■■■□□ 2.13
PCCB-209ENST00000469217 CEP170Q5SW79 1584 aa28.32■■■□□ 2.12
PCCB-209ENST00000469217 NUP160Q12769 1436 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms